BLASTX nr result

ID: Lithospermum22_contig00015288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015288
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511275.1| Pectate lyase precursor, putative [Ricinus c...    73   2e-11
ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform...    65   4e-09
gb|ABO28477.1| pectate lyase precursor [Glycine max]                   65   4e-09
ref|NP_001242543.1| uncharacterized protein LOC100779940 precurs...    65   8e-09
gb|AEN70985.1| pectate lyase [Gossypium lobatum]                       64   2e-08

>ref|XP_002511275.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223550390|gb|EEF51877.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 353

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
 Frame = +1

Query: 49  MSFPFPSLCFFLIVIIVPSL-TASPVQDPEHVVQEVQRSIANATRARRNLGYLSCGTGN 222
           M+F      FFL  ++ PSL ++SPVQDPE VV+EV  +I NA+RARRNLGYLSCGTGN
Sbjct: 1   MAFSISLALFFLFSLLTPSLISSSPVQDPELVVREVHTAIRNASRARRNLGYLSCGTGN 59


>ref|XP_003549832.1| PREDICTED: probable pectate lyase 22 isoform 1 [Glycine max]
          Length = 406

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 49  MSFPFPSLCFFLIVIIVPSL-TASPVQDPEHVVQEVQRSIANATRARRNLGYLSCGTGN 222
           M+  F SL F L  ++ P+L ++SPVQDPE V QEV R I NA+ ARRNLGYLSC TGN
Sbjct: 1   MATTFLSLLFLLFSLLTPTLISSSPVQDPEFVAQEVHRKI-NASVARRNLGYLSCATGN 58


>gb|ABO28477.1| pectate lyase precursor [Glycine max]
          Length = 312

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 49  MSFPFPSLCFFLIVIIVPSL-TASPVQDPEHVVQEVQRSIANATRARRNLGYLSCGTGN 222
           M+  F SL F L  ++ P+L ++SPVQDPE V QEV R I NA+ ARRNLGYLSC TGN
Sbjct: 1   MATTFLSLLFLLFSLLTPTLISSSPVQDPEFVAQEVHRKI-NASVARRNLGYLSCATGN 58


>ref|NP_001242543.1| uncharacterized protein LOC100779940 precursor [Glycine max]
           gi|255641960|gb|ACU21247.1| unknown [Glycine max]
          Length = 406

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 49  MSFPFPSLCFFLIVIIVPSL-TASPVQDPEHVVQEVQRSIANATRARRNLGYLSCGTGN 222
           M+  F SL F +  ++ P+L ++SPVQDPE V QEV R I NA+ ARRNLGYLSC TGN
Sbjct: 1   MATTFLSLLFLIFSLLTPALISSSPVQDPEFVAQEVNRKI-NASVARRNLGYLSCATGN 58


>gb|AEN70985.1| pectate lyase [Gossypium lobatum]
          Length = 411

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
 Frame = +1

Query: 46  TMSFPFPSL---CFFLIVIIVPSL-TASPVQDPEHVVQEVQRSIANATRARRNLGYLSCG 213
           TM+   PSL     F  ++++P L ++SPVQDPEHVVQ+V R+I     +RRNLGYLSCG
Sbjct: 4   TMAMAIPSLPLLFLFTFLLLLPLLISSSPVQDPEHVVQDVHRAI---NASRRNLGYLSCG 60

Query: 214 TGN 222
           TGN
Sbjct: 61  TGN 63


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