BLASTX nr result

ID: Lithospermum22_contig00015262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015262
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro...   320   3e-85
emb|CBI28691.3| unnamed protein product [Vitis vinifera]              319   1e-84
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   318   2e-84
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      308   2e-81
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ...   306   9e-81

>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
           vinifera]
          Length = 280

 Score =  320 bits (821), Expect = 3e-85
 Identities = 161/201 (80%), Positives = 184/201 (91%)
 Frame = -2

Query: 934 YRRGVLRCATMDEVEAEKSSIEKDVKERMEKTIESVRNNFNSIRTGRSNPAMLDKIEVEY 755
           Y+ G+ RCAT++E+EAEKSSIEKDVKERMEKTIE+VR NFNSIRTGR+NPA+LD++EVEY
Sbjct: 80  YKTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEY 139

Query: 754 YGTPVSLKSIAQISTPDASSLLVQPYDKSILKVIEKAIVNSDLGMTPNNDGEVIRLTIPQ 575
           YGTPVSLKSIAQISTPD++SLLVQPYDKS LKVIEKAIV+SDLG+TPNNDGEVIRL++PQ
Sbjct: 140 YGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQ 199

Query: 574 LTSERRKELSKVVSKQAEEGKVAIRNIRRDAIKAYXXXXXXXXXXEDNVKDLSSDLQKVT 395
           LTSERRKELSKVV+KQ EEGKVA+RNIRRDA+KAY          EDNVKDLSSDLQK+ 
Sbjct: 200 LTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLI 259

Query: 394 DEYMKKIDSVYKQKEKELLTV 332
           DEYMKKI+++YKQKEKELL V
Sbjct: 260 DEYMKKIETIYKQKEKELLKV 280


>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  319 bits (817), Expect = 1e-84
 Identities = 161/200 (80%), Positives = 183/200 (91%)
 Frame = -2

Query: 931 RRGVLRCATMDEVEAEKSSIEKDVKERMEKTIESVRNNFNSIRTGRSNPAMLDKIEVEYY 752
           R G+ RCAT++E+EAEKSSIEKDVKERMEKTIE+VR NFNSIRTGR+NPA+LD++EVEYY
Sbjct: 75  RTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYY 134

Query: 751 GTPVSLKSIAQISTPDASSLLVQPYDKSILKVIEKAIVNSDLGMTPNNDGEVIRLTIPQL 572
           GTPVSLKSIAQISTPD++SLLVQPYDKS LKVIEKAIV+SDLG+TPNNDGEVIRL++PQL
Sbjct: 135 GTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQL 194

Query: 571 TSERRKELSKVVSKQAEEGKVAIRNIRRDAIKAYXXXXXXXXXXEDNVKDLSSDLQKVTD 392
           TSERRKELSKVV+KQ EEGKVA+RNIRRDA+KAY          EDNVKDLSSDLQK+ D
Sbjct: 195 TSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLID 254

Query: 391 EYMKKIDSVYKQKEKELLTV 332
           EYMKKI+++YKQKEKELL V
Sbjct: 255 EYMKKIETIYKQKEKELLKV 274


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  318 bits (815), Expect = 2e-84
 Identities = 166/200 (83%), Positives = 182/200 (91%)
 Frame = -2

Query: 931 RRGVLRCATMDEVEAEKSSIEKDVKERMEKTIESVRNNFNSIRTGRSNPAMLDKIEVEYY 752
           RR V+R AT++E+EAEK+ IEKDVK RMEKTI++VR+NFNSIRTGRSNPAMLDKIEVEYY
Sbjct: 79  RRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYY 138

Query: 751 GTPVSLKSIAQISTPDASSLLVQPYDKSILKVIEKAIVNSDLGMTPNNDGEVIRLTIPQL 572
           G+PVSLKSIAQISTPDASSLLVQPYDKS LK IEKAIVNSDLGMTPNNDGEVIRLT+PQL
Sbjct: 139 GSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQL 198

Query: 571 TSERRKELSKVVSKQAEEGKVAIRNIRRDAIKAYXXXXXXXXXXEDNVKDLSSDLQKVTD 392
           TSERRKELSKVV+KQAEEGKVA+RNIRRDA+KAY          EDNVKDLSSDLQK+TD
Sbjct: 199 TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTD 258

Query: 391 EYMKKIDSVYKQKEKELLTV 332
           +YMKKID +YKQKEKELL V
Sbjct: 259 DYMKKIDVLYKQKEKELLKV 278


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  308 bits (788), Expect = 2e-81
 Identities = 157/200 (78%), Positives = 180/200 (90%)
 Frame = -2

Query: 931 RRGVLRCATMDEVEAEKSSIEKDVKERMEKTIESVRNNFNSIRTGRSNPAMLDKIEVEYY 752
           RRGV+R AT++E+EAEKS IE D K RMEKTI+++R NFNS+RTGR+NP+MLDKIEVEYY
Sbjct: 87  RRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYY 146

Query: 751 GTPVSLKSIAQISTPDASSLLVQPYDKSILKVIEKAIVNSDLGMTPNNDGEVIRLTIPQL 572
           GTPVSLKSIAQISTPDASSLLVQPYDKS LK IEKAIV+SDLG+TPNNDGEVIR++IPQL
Sbjct: 147 GTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQL 206

Query: 571 TSERRKELSKVVSKQAEEGKVAIRNIRRDAIKAYXXXXXXXXXXEDNVKDLSSDLQKVTD 392
           TSERRKELSK+V+K AEEGKVA+RNIRRDA+KAY          EDNVKDLSSDLQK+TD
Sbjct: 207 TSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTD 266

Query: 391 EYMKKIDSVYKQKEKELLTV 332
           EYMKK+D+++KQKEKELL V
Sbjct: 267 EYMKKLDNIFKQKEKELLKV 286


>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score =  306 bits (783), Expect = 9e-81
 Identities = 156/204 (76%), Positives = 180/204 (88%)
 Frame = -2

Query: 943 MNDYRRGVLRCATMDEVEAEKSSIEKDVKERMEKTIESVRNNFNSIRTGRSNPAMLDKIE 764
           ++  R G L+CATM+E+EAEKS IEK VKERMEKTIE+V+ +FNSIRT RSNP MLDKI+
Sbjct: 24  LSQKRTGTLKCATMEEIEAEKSLIEKSVKERMEKTIENVKASFNSIRTXRSNPDMLDKIK 83

Query: 763 VEYYGTPVSLKSIAQISTPDASSLLVQPYDKSILKVIEKAIVNSDLGMTPNNDGEVIRLT 584
           VEYYGTP SLKSIAQISTPD+SSLLV PYDKS LK IEKAIVNSDLG+TPNNDG+VIRL+
Sbjct: 84  VEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLKDIEKAIVNSDLGITPNNDGDVIRLS 143

Query: 583 IPQLTSERRKELSKVVSKQAEEGKVAIRNIRRDAIKAYXXXXXXXXXXEDNVKDLSSDLQ 404
           IPQLT++RRKELSK+V+KQAEEGKVA+RNIRRDAIK+Y          EDNVKDLSSDLQ
Sbjct: 144 IPQLTADRRKELSKIVAKQAEEGKVALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQ 203

Query: 403 KVTDEYMKKIDSVYKQKEKELLTV 332
           KV DEY+KK+DS++KQKEKEL+TV
Sbjct: 204 KVIDEYIKKVDSIFKQKEKELMTV 227


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