BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015224
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...    76   3e-12
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]      75   6e-12
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...    75   6e-12
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    72   4e-11
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]            72   5e-11

>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)
 Frame = -2

Query: 250 CYVHSSIEVWHKTLGHPVMSLVQRVVISSKLPFNRSSSIAVCTCCQMVKSHKLPFVQFTF 71
           C V  S   WH  L HP   +V RVV  +KLP  +S S +VC  CQ  KSH+LP+ + T 
Sbjct: 413 CSVAPSFARWHSRLSHPTTPIVSRVVNQNKLPCQKSHSESVCDACQKAKSHQLPYSRSTS 472

Query: 70  ESKAPLELVFSNVW 29
            S  PLELV+S+VW
Sbjct: 473 VSTRPLELVYSDVW 486


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -2

Query: 244 VHSSIEVWHKTLGHPVMSLVQRVVISSKLP-FNRSSSIAVCTCCQMVKSHKLPFVQFTFE 68
           +  ++ +WH  LGHP   +VQ+VV  + LP    S  + VC  CQ  KSH+LPF++ T  
Sbjct: 442 IKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKSHQLPFLKSTSA 501

Query: 67  SKAPLELVFSNVW 29
           S  PLELVFS+VW
Sbjct: 502 SNFPLELVFSDVW 514


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = -2

Query: 235 SIEVWHKTLGHPVMSLVQRVVISSKLP-FNRSSSIAVCTCCQMVKSHKLPFVQFTFESKA 59
           S E WH  LGHP  ++V++V+ S  LP  + S  ++VC  CQ  KSH+L F + T ESK 
Sbjct: 452 SFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQKAKSHQLSFPKSTSESKY 511

Query: 58  PLELVFSNVW 29
           PLELVFS+VW
Sbjct: 512 PLELVFSDVW 521


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = -2

Query: 235 SIEVWHKTLGHPVMSLVQRVVISSKLPFNRSSSIAVCTCCQMVKSHKLPFVQFTFESKAP 56
           S++ WH  LGHP ++ V++VV    LP +  SS +VC  CQ  KSH+LPF   +  SK P
Sbjct: 449 SLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHP 508

Query: 55  LELVFSNVW 29
           LELVFS+VW
Sbjct: 509 LELVFSDVW 517


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/65 (49%), Positives = 40/65 (61%)
 Frame = -2

Query: 223 WHKTLGHPVMSLVQRVVISSKLPFNRSSSIAVCTCCQMVKSHKLPFVQFTFESKAPLELV 44
           WH  LGHP  S+V RV+    +P + S    VC  CQ  KSH+LP+ +    S APLELV
Sbjct: 446 WHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSRSVSRSSAPLELV 505

Query: 43  FSNVW 29
           FS+VW
Sbjct: 506 FSDVW 510