BLASTX nr result
ID: Lithospermum22_contig00015160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00015160
(1251 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 244 4e-62
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 231 2e-58
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 231 2e-58
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi... 231 3e-58
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ... 231 4e-58
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Vitis vinifera]
Length = 641
Score = 244 bits (622), Expect = 4e-62
Identities = 142/344 (41%), Positives = 205/344 (59%), Gaps = 3/344 (0%)
Frame = +2
Query: 227 ICVEKIMPLWIQRASSHRIT--SIIRFNSNVPHKKPTNPPFSKKPETIWFIKVVCTLCIY 400
+ ++ + L+I R S R + +I +F+ + P + PE W +KV+CTLC+
Sbjct: 29 VALQMTLLLFITRPSRVRASKIAIAQFHEHAVGISRNRPEVIQNPEN-WIVKVICTLCV- 86
Query: 401 RSTSSNLGIFSSDYFRKNLNAYVALRVIQRLTNQLNDPRLAFAFFRCTKEKLNPVHSVLA 580
R+ S + + DYF K L +A V++ L N+P LA FF+ ++ LN HS
Sbjct: 87 RTHSLDACL---DYFSKTLTPSIAFEVVRGL----NNPELALKFFQLSRVNLNLCHSFRT 139
Query: 581 FKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEA 760
+ LL+SL ++GFH+SAK V+D MN DG D +L F+V S +AGKF A+ +
Sbjct: 140 YSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWV---- 195
Query: 761 ELSNERGGVVCSLV-YNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGL 937
GV SLV YN +LN LV+ + V EAV FF++ + NI+I GL
Sbjct: 196 ------DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSF--NILIRGL 247
Query: 938 CTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPD 1117
C G+VDKA E F MR FGC PD ITYN+L+ GFC++ ++DR L++E+ S+ +SPD
Sbjct: 248 CRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPD 307
Query: 1118 VATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALID 1249
V T+TS+ISG+C+L KM +A IL + MI GI+PN+FTFN LI+
Sbjct: 308 VVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILIN 351
Score = 77.4 bits (189), Expect = 7e-12
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 70/329 (21%)
Frame = +2
Query: 470 ALRVIQRLTNQL---NDPRLAFAFFRCTKEKLNPVHSVLAFKVLLKSLCQLGFHDSAKLV 640
+L V +L NQL N A FFR P S +F +L++ LC++G D A +
Sbjct: 201 SLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSC-SFNILIRGLCRIGKVDKAFEL 259
Query: 641 FDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVL---ISEAELSN------------- 772
F+ M GC D + ++ F + ++L +S+ +LS
Sbjct: 260 FNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYC 319
Query: 773 -----ERGGVVCS-----------LVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXX 904
E+ ++ + +NI++N K + A + +++ +
Sbjct: 320 KLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDII 379
Query: 905 XXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDTIT---------------------- 1018
+I+G C TG+V+++L+ + + + P+ T
Sbjct: 380 TFTS--LIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLR 437
Query: 1019 -------------YNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDVATFTSLISGWCRL 1159
YN ++ GFCK G++D A ++ EM+ + PD T+T LI G C
Sbjct: 438 DLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEK-RCKPDKITYTILIIGHCMK 496
Query: 1160 SKMNEAIILLDEMIGFGIRPNSFTFNALI 1246
+++EAI + + M+G G P+S T +LI
Sbjct: 497 GRLSEAISIFNRMLGTGCAPDSITMTSLI 525
Score = 65.1 bits (157), Expect = 4e-08
Identities = 57/203 (28%), Positives = 85/203 (41%)
Frame = +2
Query: 569 SVLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVL 748
+ F +L+ ++G SA+ +++ M GC D ++ GK + + ++
Sbjct: 342 NAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLW 401
Query: 749 ISEAELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVI 928
EL N R + I+ N+L K + + EA F +D N VI
Sbjct: 402 ---HEL-NARNLSPNEYTFAILTNALCKENRLHEARGFLRD--LKWRHIVAQPFMYNPVI 455
Query: 929 NGLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGV 1108
+G C G VD+A M C PD ITY L+ G C G + A + M G
Sbjct: 456 DGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLG-TGC 514
Query: 1109 SPDVATFTSLISGWCRLSKMNEA 1177
+PD T TSLIS + NEA
Sbjct: 515 APDSITMTSLISCLLKAGMPNEA 537
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 231 bits (590), Expect = 2e-58
Identities = 134/332 (40%), Positives = 189/332 (56%), Gaps = 3/332 (0%)
Frame = +2
Query: 263 RASSHRITSIIRFNSNVPHKKPTNPPFSKKPETIWFIKVVCTLCIYRSTSSNLGIFSSDY 442
R S+ I +V +P + W +KVVCTL +RS S N Y
Sbjct: 14 RTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTL-FFRSHSLNACF---GY 69
Query: 443 FRKNLNAYVALRVIQRLTNQLNDPRLAFAFFRCTKEKLNPVHSVLAFKVLLKSLCQLGFH 622
+NLN +A VI+R + DP L FF ++ L+ H+ + +L+++LC++G +
Sbjct: 70 LSRNLNPSIAFEVIKRFS----DPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLN 125
Query: 623 DSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEAELSNE---RGGVVC 793
DSAK+VFD M +DG L D +L+ +V S+A GK AK L NE G V
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL-------NEVHCYGIKVS 178
Query: 794 SLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLCTTGEVDKALEY 973
VYN +LN LVK++ V EAV F++H+ NI+I GLC GE+DKA E+
Sbjct: 179 PFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSF--NILIRGLCRIGEIDKAFEF 236
Query: 974 FGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDVATFTSLISGWC 1153
F NM +FGCFPD ++YN+L+ GFC++ ++ + L++E GVSPDV T+TS+ISG+C
Sbjct: 237 FQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYC 296
Query: 1154 RLSKMNEAIILLDEMIGFGIRPNSFTFNALID 1249
+L M A L DEM+ GI+PN FTFN LID
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLID 328
Score = 95.1 bits (235), Expect = 3e-17
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 2/259 (0%)
Frame = +2
Query: 479 VIQRLTNQLNDPRLAFAFFRCTKEKLNP--VHSVLAFKVLLKSLCQLGFHDSAKLVFDFM 652
V L N L L +E L P V V +F +L++ LC++G D A F M
Sbjct: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
Query: 653 NADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEAELSNERGGVVCSLVYNIVLNSLVK 832
GC D + ++ F + ++L + + V+ Y +++ K
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI---TYTSIISGYCK 297
Query: 833 RDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDT 1012
+K A + F + + N++I+G G + A+ + M GC PD
Sbjct: 298 LGDMKAASELFDEMVSSGIKPNDFTF--NVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 1013 ITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDVATFTSLISGWCRLSKMNEAIILLD 1192
+T+ SL+ G+C+ G++++ KL EM+ + +SP+V T+ LI+ C+ +++ EA L
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVR-NLSPNVYTYAVLINALCKENRIREARNFLR 414
Query: 1193 EMIGFGIRPNSFTFNALID 1249
+ + P F +N +ID
Sbjct: 415 HLKSSEVVPKPFIYNPVID 433
Score = 76.6 bits (187), Expect = 1e-11
Identities = 57/225 (25%), Positives = 99/225 (44%)
Frame = +2
Query: 572 VLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLI 751
V+ + ++ C+LG +A +FD M + G + + ++ F G + A V+
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAM-VMY 343
Query: 752 SEAELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVIN 931
+ L VV + +++ + V + + +++ ++IN
Sbjct: 344 EKMLLLGCLPDVV---TFTSLIDGYCREGEVNQGLKLWEE--MKVRNLSPNVYTYAVLIN 398
Query: 932 GLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVS 1111
LC + +A + +++S P YN ++ GFCK G +D A +V EMQ +
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK-KCR 457
Query: 1112 PDVATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALI 1246
PD TFT LI G C +M EAI +MI P+ T N+LI
Sbjct: 458 PDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502
Score = 65.9 bits (159), Expect = 2e-08
Identities = 57/199 (28%), Positives = 90/199 (45%)
Frame = +2
Query: 581 FKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEA 760
F VL+ ++G SA ++++ M GCL D ++ + G+ + L E
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLK-LWEEM 381
Query: 761 ELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLC 940
++ N V Y +++N+L K + ++EA +F + H+ N VI+G C
Sbjct: 382 KVRNLSPNVY---TYAVLINALCKENRIREARNFLR-HLKSSEVVPKPFIY-NPVIDGFC 436
Query: 941 TTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDV 1120
G+VD+A M+ C PD IT+ L+ G C G M A +M +I PD
Sbjct: 437 KAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM-IEINCVPDE 495
Query: 1121 ATFTSLISGWCRLSKMNEA 1177
T SLIS + NEA
Sbjct: 496 ITINSLISCLLKAGMPNEA 514
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 231 bits (590), Expect = 2e-58
Identities = 134/332 (40%), Positives = 189/332 (56%), Gaps = 3/332 (0%)
Frame = +2
Query: 263 RASSHRITSIIRFNSNVPHKKPTNPPFSKKPETIWFIKVVCTLCIYRSTSSNLGIFSSDY 442
R S+ I +V +P + W +KVVCTL +RS S N Y
Sbjct: 14 RTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTL-FFRSHSLNACF---GY 69
Query: 443 FRKNLNAYVALRVIQRLTNQLNDPRLAFAFFRCTKEKLNPVHSVLAFKVLLKSLCQLGFH 622
+NLN +A VI+R + DP L FF ++ L+ H+ + +L+++LC++G +
Sbjct: 70 LSRNLNPSIAFEVIKRFS----DPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLN 125
Query: 623 DSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEAELSNE---RGGVVC 793
DSAK+VFD M +DG L D +L+ +V S+A GK AK L NE G V
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL-------NEVHCYGIKVS 178
Query: 794 SLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLCTTGEVDKALEY 973
VYN +LN LVK++ V EAV F++H+ NI+I GLC GE+DKA E+
Sbjct: 179 PFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSF--NILIRGLCRIGEIDKAFEF 236
Query: 974 FGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDVATFTSLISGWC 1153
F NM +FGCFPD ++YN+L+ GFC++ ++ + L++E GVSPDV T+TS+ISG+C
Sbjct: 237 FQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYC 296
Query: 1154 RLSKMNEAIILLDEMIGFGIRPNSFTFNALID 1249
+L M A L DEM+ GI+PN FTFN LID
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLID 328
Score = 95.1 bits (235), Expect = 3e-17
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 2/259 (0%)
Frame = +2
Query: 479 VIQRLTNQLNDPRLAFAFFRCTKEKLNP--VHSVLAFKVLLKSLCQLGFHDSAKLVFDFM 652
V L N L L +E L P V V +F +L++ LC++G D A F M
Sbjct: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
Query: 653 NADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEAELSNERGGVVCSLVYNIVLNSLVK 832
GC D + ++ F + ++L + + V+ Y +++ K
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI---TYTSIISGYCK 297
Query: 833 RDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDT 1012
+K A + F + + N++I+G G + A+ + M GC PD
Sbjct: 298 LGDMKAASELFDEMVSSGIKPNDFTF--NVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 1013 ITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDVATFTSLISGWCRLSKMNEAIILLD 1192
+T+ SL+ G+C+ G++++ KL EM+ + +SP+V T+ LI+ C+ +++ EA L
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVR-NLSPNVYTYAVLINALCKENRIREARNFLR 414
Query: 1193 EMIGFGIRPNSFTFNALID 1249
+ + P F +N +ID
Sbjct: 415 HLKSSEVVPKPFIYNPVID 433
Score = 76.6 bits (187), Expect = 1e-11
Identities = 57/225 (25%), Positives = 99/225 (44%)
Frame = +2
Query: 572 VLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLI 751
V+ + ++ C+LG +A +FD M + G + + ++ F G + A V+
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAM-VMY 343
Query: 752 SEAELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVIN 931
+ L VV + +++ + V + + +++ ++IN
Sbjct: 344 EKMLLLGCLPDVV---TFTSLIDGYCREGEVNQGLKLWEE--MKVRNLSPNVYTYAVLIN 398
Query: 932 GLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVS 1111
LC + +A + +++S P YN ++ GFCK G +D A +V EMQ +
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK-KCR 457
Query: 1112 PDVATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALI 1246
PD TFT LI G C +M EAI +MI P+ T N+LI
Sbjct: 458 PDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502
Score = 65.9 bits (159), Expect = 2e-08
Identities = 57/199 (28%), Positives = 90/199 (45%)
Frame = +2
Query: 581 FKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEA 760
F VL+ ++G SA ++++ M GCL D ++ + G+ + L E
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLK-LWEEM 381
Query: 761 ELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLC 940
++ N V Y +++N+L K + ++EA +F + H+ N VI+G C
Sbjct: 382 KVRNLSPNVY---TYAVLINALCKENRIREARNFLR-HLKSSEVVPKPFIY-NPVIDGFC 436
Query: 941 TTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDV 1120
G+VD+A M+ C PD IT+ L+ G C G M A +M +I PD
Sbjct: 437 KAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM-IEINCVPDE 495
Query: 1121 ATFTSLISGWCRLSKMNEA 1177
T SLIS + NEA
Sbjct: 496 ITINSLISCLLKAGMPNEA 514
>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Glycine max]
Length = 544
Score = 231 bits (589), Expect = 3e-58
Identities = 129/295 (43%), Positives = 189/295 (64%)
Frame = +2
Query: 365 WFIKVVCTLCIYRSTSSNLGIFSSDYFRKNLNAYVALRVIQRLTNQLNDPRLAFAFFRCT 544
WF+K+V TL + S++L YFR++L L V++R N+P L F FFR T
Sbjct: 46 WFVKIVSTLFL---CSNSLDDRFLGYFREHLTPSHVLEVVKRF----NNPNLGFKFFRFT 98
Query: 545 KEKLNPVHSVLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGK 724
+E+L+ HS + +LL+SLCQ G H+SAKL++D M +DG L D +LL F+V SFA A +
Sbjct: 99 RERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADR 158
Query: 725 FKFAKEVLISEAELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXX 904
F +KE L++EA+ S + V+ VYN LN L+K + + +A+ F++ +
Sbjct: 159 FDVSKE-LLAEAQCSGVQVDVI---VYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAF 214
Query: 905 XXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVR 1084
NI+I GLCT G+VD+A E G+M SFGC PD +TYN L+ G C+I +DRAR L+
Sbjct: 215 TF--NILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLE 272
Query: 1085 EMQSQIGVSPDVATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALID 1249
E+ + +P+V ++T++ISG+CRLSKM+EA L EM+ G +PN FTF+AL+D
Sbjct: 273 EVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVD 327
Score = 84.0 bits (206), Expect = 8e-14
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Frame = +2
Query: 572 VLAFKVLLKSLCQLGFHDSAKLVF-DFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVL 748
V+ + L L + D A +F + M + CL D + ++ AG A E+L
Sbjct: 178 VIVYNNFLNILIKHNRLDDAICLFRELMRSHSCL-DAFTFNILIRGLCTAGDVDEAFELL 236
Query: 749 ISEAELSNERGGVVCS---LVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXN 919
+ G CS + YNI+L+ L + D V A D ++ +
Sbjct: 237 -------GDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEE-VCLKCEFAPNVVSYT 288
Query: 920 IVINGLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQ 1099
VI+G C ++D+A F M G P+ T+++LV GF K GDM A + +++
Sbjct: 289 TVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFH 348
Query: 1100 IGVSPDVATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALI 1246
G +P+V T TSLI+G+CR +N + L EM I N +T++ LI
Sbjct: 349 -GCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLI 396
Score = 67.8 bits (164), Expect = 6e-09
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 4/239 (1%)
Frame = +2
Query: 539 CTKEKLNPVHSVLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANA 718
C K + P +V+++ ++ C+L D A +F M G + +V F A
Sbjct: 275 CLKCEFAP--NVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKA 332
Query: 719 GKFKFA----KEVLISEAELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXX 886
G A K++L G + ++N + V +D +++
Sbjct: 333 GDMASALGMHKKILF--------HGCAPNVITLTSLINGYCRAGWVNHGLDLWRE--MNA 382
Query: 887 XXXXXXXXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDR 1066
+++I+ LC + + +A ++ P YN ++ G+CK G++D
Sbjct: 383 RNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDE 442
Query: 1067 ARKLVREMQSQIGVSPDVATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNAL 1243
A +V EM+ + PD TFT LI G C + EAI + +M+ G P+ T L
Sbjct: 443 ANAIVAEMEEK--CKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTL 499
>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331650|gb|EFH62069.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 231 bits (588), Expect = 4e-58
Identities = 118/295 (40%), Positives = 179/295 (60%)
Frame = +2
Query: 365 WFIKVVCTLCIYRSTSSNLGIFSSDYFRKNLNAYVALRVIQRLTNQLNDPRLAFAFFRCT 544
W +K+V TL +YR S+L Y KNLN +++ V+++L N +P + F F+ +
Sbjct: 40 WLVKIVSTLFVYRVPDSDLCFC---YLSKNLNPFISFEVVKKLDN---NPHIGFRFWEFS 93
Query: 545 KEKLNPVHSVLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGK 724
+ KLN HS + +L +SLC+ G HD A +F+ M +DG + +LL F+V SFA GK
Sbjct: 94 RFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGK 153
Query: 725 FKFAKEVLISEAELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXX 904
A +L+ E+ C +V N +LN+LVK D V++A+ F++H+
Sbjct: 154 LHCATALLLQSYEVEG------CCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTK 207
Query: 905 XXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVR 1084
NI+I GLC G+ +KA+E G M FGC PD +TYN+L+KGFCK ++ +A ++
Sbjct: 208 TF--NILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD 265
Query: 1085 EMQSQIGVSPDVATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALID 1249
+++S G SPDV T+TS+ISG+C+ KM EA +LLD+M+ GI P + TFN L+D
Sbjct: 266 DVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVD 320
Score = 101 bits (251), Expect = 5e-19
Identities = 62/223 (27%), Positives = 112/223 (50%)
Frame = +2
Query: 581 FKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKLLDFVVLSFANAGKFKFAKEVLISEA 760
F +L++ LC +G + A + M+ GCL D + ++ F + + K A E+
Sbjct: 209 FNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVK 268
Query: 761 ELSNERGGVVCSLVYNIVLNSLVKRDHVKEAVDFFKDHIXXXXXXXXXXXXXNIVINGLC 940
S VV Y +++ K ++EA D + N++++G
Sbjct: 269 SSSGCSPDVV---TYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTF--NVLVDGYA 323
Query: 941 TTGEVDKALEYFGNMRSFGCFPDTITYNSLVKGFCKIGDMDRARKLVREMQSQIGVSPDV 1120
GE+ A E G M SFGCFPD +T+ SL+ G+C++G +++ +L EM ++ G+ P+
Sbjct: 324 KAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNAR-GMFPNA 382
Query: 1121 ATFTSLISGWCRLSKMNEAIILLDEMIGFGIRPNSFTFNALID 1249
T++ LI+ C+ +++ +A LL ++ I P F +N +ID
Sbjct: 383 FTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Score = 78.2 bits (191), Expect = 4e-12
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 6/253 (2%)
Frame = +2
Query: 506 NDPRLAFAFFRCTKEKLNPVHSVLAFKVLLKSLCQLGFHDSAKLVFDFMNADGCLCDRKL 685
N+ + A F K V+ + ++ C+ G A ++ D M G
Sbjct: 255 NELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVT 314
Query: 686 LDFVVLSFANAGKFKFAKEVLISEAELSNERGGVVCS------LVYNIVLNSLVKRDHVK 847
+ +V +A AG+ A+E+ RG ++ + + +++ + V
Sbjct: 315 FNVLVDGYAKAGEMHTAEEI----------RGKMISFGCFPDVVTFTSLIDGYCRVGQVN 364
Query: 848 EAVDFFKDHIXXXXXXXXXXXXXNIVINGLCTTGEVDKALEYFGNMRSFGCFPDTITYNS 1027
+ +++ +I+IN LC + KA E G + S P YN
Sbjct: 365 QGFRLWEE--MNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 1028 LVKGFCKIGDMDRARKLVREMQSQIGVSPDVATFTSLISGWCRLSKMNEAIILLDEMIGF 1207
++ GFCK G ++ A +V EM+ + PD TFT LI G C +M EA+ + +M+
Sbjct: 423 VIDGFCKAGKVNEAIVIVEEMEKK-KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 1208 GIRPNSFTFNALI 1246
G P+ T ++L+
Sbjct: 482 GCSPDKITVSSLL 494