BLASTX nr result

ID: Lithospermum22_contig00015157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015157
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncat...   102   2e-19
ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...    99   3e-18
emb|CBI30815.3| unnamed protein product [Vitis vinifera]               99   3e-18
ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative ...    98   6e-18
gb|ABF69956.1| pre-mRNA processing protein-related [Musa acuminata]    89   3e-15

>ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 1215

 Score =  102 bits (254), Expect = 2e-19
 Identities = 48/77 (62%), Positives = 58/77 (75%)
 Frame = +3

Query: 735 CSFCVLYFELFSNALDRVYQRAFSFVGKDYNCHVLWDKYLQFEFSQQQWGMLAHIYIRVL 914
           CSF +  FE  S+ + R+++RA SFVGKDY CH LWD+Y+ FEFSQQQW  LAHIYI+ L
Sbjct: 126 CSFGMSSFEDASD-IRRLFKRAISFVGKDYLCHTLWDRYIHFEFSQQQWTCLAHIYIQTL 184

Query: 915 KFPTKGLHFYYDKYDML 965
           KFPTK LH YYD +  L
Sbjct: 185 KFPTKKLHQYYDSFKKL 201


>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
 Frame = +3

Query: 741 FCVLYFELFSNALD--RVYQRAFSFVGKDYNCHVLWDKYLQFEFSQQQWGMLAHIYIRVL 914
           +C     +F +  D  R+++R  SFVGKDY CH LWDKY++FE SQQQW  LAH+YI  L
Sbjct: 146 YCSFSMSVFEDPFDVRRLFKRGLSFVGKDYLCHTLWDKYIEFELSQQQWSFLAHVYILTL 205

Query: 915 KFPTKGLHFYYDKYDMLFLV 974
           +FPTK LH YYD +  L  +
Sbjct: 206 RFPTKKLHHYYDSFKKLVAI 225


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
 Frame = +3

Query: 741 FCVLYFELFSNALD--RVYQRAFSFVGKDYNCHVLWDKYLQFEFSQQQWGMLAHIYIRVL 914
           +C     +F +  D  R+++R  SFVGKDY CH LWDKY++FE SQQQW  LAH+YI  L
Sbjct: 101 YCSFSMSVFEDPFDVRRLFKRGLSFVGKDYLCHTLWDKYIEFELSQQQWSFLAHVYILTL 160

Query: 915 KFPTKGLHFYYDKYDMLFLV 974
           +FPTK LH YYD +  L  +
Sbjct: 161 RFPTKKLHHYYDSFKKLVAI 180


>ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
           gi|223541164|gb|EEF42720.1| Pre-mRNA-processing protein
           prp39, putative [Ricinus communis]
          Length = 395

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 45/77 (58%), Positives = 56/77 (72%)
 Frame = +3

Query: 735 CSFCVLYFELFSNALDRVYQRAFSFVGKDYNCHVLWDKYLQFEFSQQQWGMLAHIYIRVL 914
           C F  L FE  S+ + R+++RA SFVGKDY CH LWDKY++FEFS + W  LAHIYI+ L
Sbjct: 109 CDFGTLSFEDPSD-VRRLFKRALSFVGKDYLCHALWDKYIEFEFSLKHWSSLAHIYIQTL 167

Query: 915 KFPTKGLHFYYDKYDML 965
           +FPTK LH YYD +  L
Sbjct: 168 RFPTKKLHHYYDSFKKL 184


>gb|ABF69956.1| pre-mRNA processing protein-related [Musa acuminata]
          Length = 519

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 41/77 (53%), Positives = 56/77 (72%)
 Frame = +3

Query: 735 CSFCVLYFELFSNALDRVYQRAFSFVGKDYNCHVLWDKYLQFEFSQQQWGMLAHIYIRVL 914
           C+F  L FE  ++ + R+Y+RA SFV KDY C+ LWDKY++FE+S +QW  LAH+YIR L
Sbjct: 72  CTFGALSFEDPAD-VRRLYERALSFVKKDYLCYQLWDKYIEFEYSLKQWSQLAHLYIRTL 130

Query: 915 KFPTKGLHFYYDKYDML 965
            FPTK L  YY+++  L
Sbjct: 131 VFPTKKLQSYYERFKRL 147


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