BLASTX nr result
ID: Lithospermum22_contig00015140
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00015140
(1525 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35029.3| unnamed protein product [Vitis vinifera] 491 e-136
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat... 491 e-136
ref|NP_189505.2| pentatricopeptide repeat-containing protein [Ar... 439 e-121
ref|NP_189507.2| pentatricopeptide repeat-containing protein [Ar... 438 e-120
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ... 426 e-117
>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 491 bits (1263), Expect = e-136
Identities = 239/423 (56%), Positives = 308/423 (72%)
Frame = +1
Query: 1 LIRAYSRSSQPHKAIHYFNLMLTNMLGFGTFSLVADHHTFPYVIIACANLGLVVEGRKIH 180
LIRAYSRSS P A+HYF LML + ++ D HTFP++I AC N ++ G++IH
Sbjct: 75 LIRAYSRSSTPQLALHYFQLMLDDE------NVGPDQHTFPFIISACTNSLWMLLGKQIH 128
Query: 181 CWVLKNGLGSFDCHVQTALLRLYVSCKALGDARKVFDQIAEKDAVHCNVLISGYLKCDMG 360
WVLKNG+ S D HVQTAL+R Y C A+GDARK+FD+I D V NVL++GY++ +
Sbjct: 129 NWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLA 188
Query: 361 LDGLEVFRNMLVTGIEPDEFCVTTGLAACSKLGALEQGKWIHEYVQKRNMLLKDVFVGTA 540
+ L FRNMLV+G+EPDEFC+TT L C++LGAL+QGKWIHEYV KR L DVF+GTA
Sbjct: 189 PEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTA 248
Query: 541 VVDMYAKCGCIDMALEVFESMPRRNAVSWAAIIGGLGMHGDAKRAIGCLRRMYVEDNIRP 720
+VDMYAKCGCID ++EVFE M +RN SW+A+IGG +HG ++A+ CL RM VED +RP
Sbjct: 249 LVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRP 308
Query: 721 DGIVLLGVLTACAHAGLHKEGQFLLDKMVELYGVRPEHEHYSCVVDMLSKAGKLDDSVNV 900
DG+VLLGV+ ACAHAGL +EGQFLL+ M YG+ P+HEHYSC+VD+L +AG+LD+++ +
Sbjct: 309 DGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKL 368
Query: 901 IRGMPMKPRASVWGALLSGSRIHNNVIXXXXXXXXXXXXXXXXXXXXXAAYVQLSYIYLA 1080
IR MPMKPRA+VWGALLSG R HNNV AYVQLS IYLA
Sbjct: 369 IRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLA 428
Query: 1081 SQRCDEARKVRKMIGDKGFKKTAGGSAIEVDGEVHEFVSGESSHPHLAKIHGILKCMSGD 1260
+Q+C++A ++R+MIGDK K G S IEV+GEV++FVSG+ SHP LA+IH +L +S
Sbjct: 429 AQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488
Query: 1261 SSH 1269
S+
Sbjct: 489 HSY 491
>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 491 bits (1263), Expect = e-136
Identities = 239/423 (56%), Positives = 308/423 (72%)
Frame = +1
Query: 1 LIRAYSRSSQPHKAIHYFNLMLTNMLGFGTFSLVADHHTFPYVIIACANLGLVVEGRKIH 180
LIRAYSRSS P A+HYF LML + ++ D HTFP++I AC N ++ G++IH
Sbjct: 75 LIRAYSRSSTPQLALHYFQLMLDDE------NVGPDQHTFPFIISACTNSLWMLLGKQIH 128
Query: 181 CWVLKNGLGSFDCHVQTALLRLYVSCKALGDARKVFDQIAEKDAVHCNVLISGYLKCDMG 360
WVLKNG+ S D HVQTAL+R Y C A+GDARK+FD+I D V NVL++GY++ +
Sbjct: 129 NWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLA 188
Query: 361 LDGLEVFRNMLVTGIEPDEFCVTTGLAACSKLGALEQGKWIHEYVQKRNMLLKDVFVGTA 540
+ L FRNMLV+G+EPDEFC+TT L C++LGAL+QGKWIHEYV KR L DVF+GTA
Sbjct: 189 PEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTA 248
Query: 541 VVDMYAKCGCIDMALEVFESMPRRNAVSWAAIIGGLGMHGDAKRAIGCLRRMYVEDNIRP 720
+VDMYAKCGCID ++EVFE M +RN SW+A+IGG +HG ++A+ CL RM VED +RP
Sbjct: 249 LVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRP 308
Query: 721 DGIVLLGVLTACAHAGLHKEGQFLLDKMVELYGVRPEHEHYSCVVDMLSKAGKLDDSVNV 900
DG+VLLGV+ ACAHAGL +EGQFLL+ M YG+ P+HEHYSC+VD+L +AG+LD+++ +
Sbjct: 309 DGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKL 368
Query: 901 IRGMPMKPRASVWGALLSGSRIHNNVIXXXXXXXXXXXXXXXXXXXXXAAYVQLSYIYLA 1080
IR MPMKPRA+VWGALLSG R HNNV AYVQLS IYLA
Sbjct: 369 IRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLA 428
Query: 1081 SQRCDEARKVRKMIGDKGFKKTAGGSAIEVDGEVHEFVSGESSHPHLAKIHGILKCMSGD 1260
+Q+C++A ++R+MIGDK K G S IEV+GEV++FVSG+ SHP LA+IH +L +S
Sbjct: 429 AQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488
Query: 1261 SSH 1269
S+
Sbjct: 489 HSY 491
>ref|NP_189505.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At3g28640 gi|9294278|dbj|BAB02180.1| unnamed protein
product [Arabidopsis thaliana]
gi|332643948|gb|AEE77469.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 439 bits (1130), Expect = e-121
Identities = 219/421 (52%), Positives = 290/421 (68%)
Frame = +1
Query: 1 LIRAYSRSSQPHKAIHYFNLMLTNMLGFGTFSLVADHHTFPYVIIACANLGLVVEGRKIH 180
+IR SRSSQPH + YF LM+ + + TF ++I+AC G++IH
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEE----EEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 181 CWVLKNGLGSFDCHVQTALLRLYVSCKALGDARKVFDQIAEKDAVHCNVLISGYLKCDMG 360
CWV+KNG+ D HVQT +LR+YV K L DARKVFD+I + D V +VL++GY++C +G
Sbjct: 140 CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 361 LDGLEVFRNMLVTGIEPDEFCVTTGLAACSKLGALEQGKWIHEYVQKRNMLLKDVFVGTA 540
+GLEVFR MLV G+EPDEF VTT L AC+++GAL QGKWIHE+V+K++ + DVFVGTA
Sbjct: 200 SEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 541 VVDMYAKCGCIDMALEVFESMPRRNAVSWAAIIGGLGMHGDAKRAIGCLRRMYVEDNIRP 720
+VDMYAKCGCI+ A+EVF+ + RRN SWAA+IGG +G AK+A+ CL R+ ED I+P
Sbjct: 260 LVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKP 319
Query: 721 DGIVLLGVLTACAHAGLHKEGQFLLDKMVELYGVRPEHEHYSCVVDMLSKAGKLDDSVNV 900
D +VLLGVL ACAH G +EG+ +L+ M Y + P+HEHYSC+VD++ +AG+LDD++N+
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 379
Query: 901 IRGMPMKPRASVWGALLSGSRIHNNVIXXXXXXXXXXXXXXXXXXXXXAAYVQLSYIYLA 1080
I MPMKP ASVWGALL+G R H NV AA VQLS IY +
Sbjct: 380 IEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFS 439
Query: 1081 SQRCDEARKVRKMIGDKGFKKTAGGSAIEVDGEVHEFVSGESSHPHLAKIHGILKCMSGD 1260
QR EA KVR MI +G +KT G S +EVDG V +FVSG+ SHP+L +IH ++ +S D
Sbjct: 440 VQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVD 499
Query: 1261 S 1263
+
Sbjct: 500 A 500
>ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g28660 gi|9294280|dbj|BAB02182.1| unnamed protein
product [Arabidopsis thaliana] gi|20259531|gb|AAM13885.1|
unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis
thaliana] gi|332643950|gb|AEE77471.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 438 bits (1127), Expect = e-120
Identities = 221/422 (52%), Positives = 290/422 (68%)
Frame = +1
Query: 1 LIRAYSRSSQPHKAIHYFNLMLTNMLGFGTFSLVADHHTFPYVIIACANLGLVVEGRKIH 180
+IR SRSSQPH + YF LM+ + + TF ++I+AC G++IH
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEE----EEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 181 CWVLKNGLGSFDCHVQTALLRLYVSCKALGDARKVFDQIAEKDAVHCNVLISGYLKCDMG 360
CWV+KNG+ D HVQT +LR+YV K L DARKVFD+I + D V +VL++GY++C +G
Sbjct: 140 CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 361 LDGLEVFRNMLVTGIEPDEFCVTTGLAACSKLGALEQGKWIHEYVQKRNMLLKDVFVGTA 540
+GLEVF+ MLV GIEPDEF VTT L AC+++GAL QGKWIHE+V+K+ + DVFVGTA
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 541 VVDMYAKCGCIDMALEVFESMPRRNAVSWAAIIGGLGMHGDAKRAIGCLRRMYVEDNIRP 720
+VDMYAKCGCI+ A+EVFE + RRN SWAA+IGG +G AK+A CL R+ ED I+P
Sbjct: 260 LVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKP 319
Query: 721 DGIVLLGVLTACAHAGLHKEGQFLLDKMVELYGVRPEHEHYSCVVDMLSKAGKLDDSVNV 900
D +VLLGVL ACAH G +EG+ +L+ M YG+ P+HEHYSC+VD++ +AG+LDD++++
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDL 379
Query: 901 IRGMPMKPRASVWGALLSGSRIHNNVIXXXXXXXXXXXXXXXXXXXXXAAYVQLSYIYLA 1080
I MPMKP ASVWGALL+G R H NV AA VQLS IY +
Sbjct: 380 IEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFS 439
Query: 1081 SQRCDEARKVRKMIGDKGFKKTAGGSAIEVDGEVHEFVSGESSHPHLAKIHGILKCMSGD 1260
QR EA KVR MI +G +KT G S +EVDG V +FVSG+ SHP+L +IH ++ +S D
Sbjct: 440 VQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVD 499
Query: 1261 SS 1266
+S
Sbjct: 500 AS 501
>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322958|gb|EFH53379.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 399
Score = 426 bits (1095), Expect = e-117
Identities = 209/383 (54%), Positives = 272/383 (71%)
Frame = +1
Query: 115 TFPYVIIACANLGLVVEGRKIHCWVLKNGLGSFDCHVQTALLRLYVSCKALGDARKVFDQ 294
TF ++I+AC L G++IHCWV+KNG+ D HVQT +LR+YV K L DA KVFD+
Sbjct: 13 TFYFLIVACFKACLFSVGKQIHCWVVKNGVFLSDGHVQTGILRIYVEDKVLLDAHKVFDE 72
Query: 295 IAEKDAVHCNVLISGYLKCDMGLDGLEVFRNMLVTGIEPDEFCVTTGLAACSKLGALEQG 474
I + D V +VL++GY++C +G +GLEVFR MLV G+EPDEF VTT L AC+++GAL QG
Sbjct: 73 IPKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVRGVEPDEFSVTTALTACAQVGALAQG 132
Query: 475 KWIHEYVQKRNMLLKDVFVGTAVVDMYAKCGCIDMALEVFESMPRRNAVSWAAIIGGLGM 654
KWIHE+V+K+ + DVFVGTA+VDMYAKCGCI+MA+EVFE + RRN SWAA+IGG
Sbjct: 133 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAALIGGYAA 192
Query: 655 HGDAKRAIGCLRRMYVEDNIRPDGIVLLGVLTACAHAGLHKEGQFLLDKMVELYGVRPEH 834
+G AK+A+ CL RM ED I+PD +VLLGVL ACAH G +EG+ +L M YG+ P+H
Sbjct: 193 YGYAKKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEARYGITPKH 252
Query: 835 EHYSCVVDMLSKAGKLDDSVNVIRGMPMKPRASVWGALLSGSRIHNNVIXXXXXXXXXXX 1014
EHYSC+VD++ +AG+LDD++++I MPMKP ASVWGALL+G R H NV
Sbjct: 253 EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLD 312
Query: 1015 XXXXXXXXXXAAYVQLSYIYLASQRCDEARKVRKMIGDKGFKKTAGGSAIEVDGEVHEFV 1194
AA VQLS IY + QR EA KVR MI +G +KT G S +EVDG V +FV
Sbjct: 313 LEKGNAEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGIRKTPGWSVLEVDGNVTKFV 372
Query: 1195 SGESSHPHLAKIHGILKCMSGDS 1263
SG+ SHP+L +IH ++ +S D+
Sbjct: 373 SGDVSHPNLLQIHTVIHLLSVDA 395
Score = 79.3 bits (194), Expect = 2e-12
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Frame = +1
Query: 1 LIRAYSRSSQPHKAIHYFNLMLTNMLGFGTFSLVADHHTFPYVIIACANLGLVVEGRKIH 180
L+ Y R + + F ML + FS+ + ACA +G + +G+ IH
Sbjct: 84 LMNGYVRCGLGSEGLEVFREMLVRGVEPDEFSVTT-------ALTACAQVGALAQGKWIH 136
Query: 181 CWVLKNGLGSFDCHVQTALLRLYVSCKALGDARKVFDQIAEKDAVHCNVLISGYLKCDMG 360
+V K D V TAL+ +Y C + A +VF++++ ++ LI GY
Sbjct: 137 EFVKKKRWIESDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAALIGGYAAYGYA 196
Query: 361 LDGLEVFRNM-LVTGIEPDEFCVTTGLAACSKLGALEQGKWIHEYVQKRNMLLKDVFVGT 537
+ M GI+PD + LAAC+ G L++G+ + ++ R + +
Sbjct: 197 KKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEARYGITPKHEHYS 256
Query: 538 AVVDMYAKCGCIDMALEVFESMPRRNAVS-WAAIIGGLGMH 657
+VD+ + G +D AL++ E MP + S W A++ G H
Sbjct: 257 CIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 297