BLASTX nr result

ID: Lithospermum22_contig00015135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015135
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   102   1e-28
emb|CBI37381.3| unnamed protein product [Vitis vinifera]              103   8e-28
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   103   8e-28
emb|CAN78331.1| hypothetical protein VITISV_034974 [Vitis vinifera]   103   8e-28
ref|XP_002883819.1| minichromosome maintenance family protein [A...   108   1e-27

>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  102 bits (254), Expect(2) = 1e-28
 Identities = 50/55 (90%), Positives = 51/55 (92%)
 Frame = -2

Query: 336 FGATNPKGQYAPDQPLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAVVSSHILAE 172
           FGATNPKGQY P Q LSVNT LSGPL+SRFDIVLVLLDTKNPEWDAVVSSHILAE
Sbjct: 460 FGATNPKGQYDPYQTLSVNTALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAE 514



 Score = 48.9 bits (115), Expect(2) = 1e-28
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = -1

Query: 106 QADSLKRNSGEDLKDIWPLSMLRRYIQFVKGYFQP 2
           + +S K N  +DL +IW L+MLRRYI FVKGYF+P
Sbjct: 514 EKESGKGNENDDLANIWTLAMLRRYIHFVKGYFKP 548


>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  103 bits (256), Expect(2) = 8e-28
 Identities = 50/55 (90%), Positives = 51/55 (92%)
 Frame = -2

Query: 336 FGATNPKGQYAPDQPLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAVVSSHILAE 172
           FGATNPKG Y P Q LSVNTTLSGPL+SRFDIVLVLLDTKNPEWDAVVSSHILAE
Sbjct: 454 FGATNPKGHYDPGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAE 508



 Score = 45.4 bits (106), Expect(2) = 8e-28
 Identities = 20/36 (55%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 QQADSLKRNSGEDLKDIWPLSMLRRYIQFVKGYFQP 2
           +++++ KR+  E+L +IWPL +LRRYI FVKGYF+P
Sbjct: 510 EESENGKRD--ENLANIWPLPLLRRYIHFVKGYFKP 543


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  103 bits (256), Expect(2) = 8e-28
 Identities = 50/55 (90%), Positives = 51/55 (92%)
 Frame = -2

Query: 336 FGATNPKGQYAPDQPLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAVVSSHILAE 172
           FGATNPKG Y P Q LSVNTTLSGPL+SRFDIVLVLLDTKNPEWDAVVSSHILAE
Sbjct: 454 FGATNPKGHYDPGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAE 508



 Score = 45.4 bits (106), Expect(2) = 8e-28
 Identities = 20/36 (55%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 QQADSLKRNSGEDLKDIWPLSMLRRYIQFVKGYFQP 2
           +++++ KR+  E+L +IWPL +LRRYI FVKGYF+P
Sbjct: 510 EESENGKRD--ENLANIWPLPLLRRYIHFVKGYFKP 543


>emb|CAN78331.1| hypothetical protein VITISV_034974 [Vitis vinifera]
          Length = 489

 Score =  103 bits (256), Expect(2) = 8e-28
 Identities = 50/55 (90%), Positives = 51/55 (92%)
 Frame = -2

Query: 336 FGATNPKGQYAPDQPLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAVVSSHILAE 172
           FGATNPKG Y P Q LSVNTTLSGPL+SRFDIVLVLLDTKNPEWDAVVSSHILAE
Sbjct: 306 FGATNPKGHYDPGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAE 360



 Score = 45.4 bits (106), Expect(2) = 8e-28
 Identities = 20/36 (55%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 QQADSLKRNSGEDLKDIWPLSMLRRYIQFVKGYFQP 2
           +++++ KR+  E+L +IWPL +LRRYI FVKGYF+P
Sbjct: 362 EESENGKRD--ENLANIWPLPLLRRYIHFVKGYFKP 395


>ref|XP_002883819.1| minichromosome maintenance family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329659|gb|EFH60078.1|
           minichromosome maintenance family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 661

 Score =  108 bits (269), Expect(2) = 1e-27
 Identities = 52/64 (81%), Positives = 54/64 (84%)
 Frame = -2

Query: 336 FGATNPKGQYAPDQPLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAVVSSHILAEAYFSM 157
           FGATNPKGQY PDQ LSVNT LSGPL+SRFDIVLVLLDTKNPEWDAVVSSHILAE     
Sbjct: 459 FGATNPKGQYDPDQSLSVNTALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEVQIEQ 518

Query: 156 AHDL 145
             D+
Sbjct: 519 GRDV 522



 Score = 39.7 bits (91), Expect(2) = 1e-27
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -1

Query: 76  EDLKDIWPLSMLRRYIQFVKGYFQP 2
           +DL  IWPL ML+RYIQFVK  F+P
Sbjct: 523 DDLTTIWPLPMLQRYIQFVKRNFRP 547


Top