BLASTX nr result

ID: Lithospermum22_contig00015038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00015038
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   256   8e-66
ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|2...   250   4e-64
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ...   246   8e-63
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   243   7e-62
ref|XP_002867105.1| hypothetical protein ARALYDRAFT_353351 [Arab...   242   9e-62

>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  256 bits (653), Expect = 8e-66
 Identities = 135/170 (79%), Positives = 153/170 (90%)
 Frame = -3

Query: 772 SVKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVQVS 593
           ++KCMANPRRVKMVAKQIQRELSDMLLTDKVLQYA+LPEAALGAD+YLSSLTTISDV+VS
Sbjct: 53  TIKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVS 112

Query: 592 ADLQVVKVFVSVFGDDRGKEVAISGLKSKAKYVRSELGRRMKLRLTPEVRFVEDDSIERG 413
            DLQVVKV+VSVFGDDRGKEVAI+GLK+KAKYVRSELGRRMKLRLTPE+RF+ED+S ERG
Sbjct: 113 TDLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERG 172

Query: 412 SRVIAILDKIKDEKDNSVSEEVGNXXXXXXXXXDKNWEGDDHDEEGIIYV 263
           SRV+AILDKIK EK+N+ SE+  +         D++WEGDD D EGIIYV
Sbjct: 173 SRVLAILDKIKAEKENTGSEDELS-ESSDSPQDDRDWEGDDPD-EGIIYV 220


>ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|222849110|gb|EEE86657.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  250 bits (638), Expect = 4e-64
 Identities = 133/166 (80%), Positives = 148/166 (89%)
 Frame = -3

Query: 760 MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVQVSADLQ 581
           MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGAD+YLSSLTTISDV+VSADLQ
Sbjct: 1   MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQ 60

Query: 580 VVKVFVSVFGDDRGKEVAISGLKSKAKYVRSELGRRMKLRLTPEVRFVEDDSIERGSRVI 401
           VVKV+VSVFGDDRGKEVAI+GLKSKAKYVRS+LGRRMKLRLTPE+RF+ED+ +ERGSRVI
Sbjct: 61  VVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVI 120

Query: 400 AILDKIKDEKDNSVSEEVGNXXXXXXXXXDKNWEGDDHDEEGIIYV 263
           AILD+IK EKDN+ S+             D++WEGDD DE+ IIYV
Sbjct: 121 AILDRIKAEKDNAESQVDELSDSSNSIQYDEDWEGDDPDED-IIYV 165


>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
           [Cucumis sativus] gi|449529960|ref|XP_004171965.1|
           PREDICTED: probable ribosome-binding factor A,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  246 bits (627), Expect = 8e-63
 Identities = 125/173 (72%), Positives = 152/173 (87%)
 Frame = -3

Query: 781 RRESVKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDV 602
           R  +++CMAN RR+KMVAKQIQRELSDMLLTDKVLQ+A+LPEA+LGAD+YLSSLTTI+DV
Sbjct: 53  RGATIRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDV 112

Query: 601 QVSADLQVVKVFVSVFGDDRGKEVAISGLKSKAKYVRSELGRRMKLRLTPEVRFVEDDSI 422
           +VSADLQVVKV+VSVFGD+RGK+VAI+GLKSKAKYVRS LG+RMKLRLTPE+RF+ED+S 
Sbjct: 113 EVSADLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESF 172

Query: 421 ERGSRVIAILDKIKDEKDNSVSEEVGNXXXXXXXXXDKNWEGDDHDEEGIIYV 263
           ERGSRVIAILD+IKD+K ++V E+            D++W+GDD DE+ IIYV
Sbjct: 173 ERGSRVIAILDRIKDKKKDTVDEDFDQPELSDALDDDRDWKGDDADED-IIYV 224


>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  243 bits (619), Expect = 7e-62
 Identities = 130/171 (76%), Positives = 150/171 (87%), Gaps = 1/171 (0%)
 Frame = -3

Query: 772 SVKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVQVS 593
           +V+CMAN RRVKMVAKQI+RELSDMLLTDKVLQ+AVLPEAALGADRYLSSLTTISDV+VS
Sbjct: 54  TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 113

Query: 592 ADLQVVKVFVSVFGDDRGKEVAISGLKSKAKYVRSELGRRMKLRLTPEVRFVEDDSIERG 413
           ADLQVVKV+VSVFGD++GKEVAI+GLKSKAKYVRSELGRRMKLRLTPE+RFVED+S+ERG
Sbjct: 114 ADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERG 173

Query: 412 SRVIAILDKIKDEKDNSVSEEVGNXXXXXXXXXDKNWEGD-DHDEEGIIYV 263
           SRVIAILD+IK+EK  + S++            D +WEGD D  +E IIY+
Sbjct: 174 SRVIAILDRIKNEKKMAGSQD--QPSESSDLPQDDDWEGDGDDPDENIIYI 222


>ref|XP_002867105.1| hypothetical protein ARALYDRAFT_353351 [Arabidopsis lyrata subsp.
            lyrata] gi|297312941|gb|EFH43364.1| hypothetical protein
            ARALYDRAFT_353351 [Arabidopsis lyrata subsp. lyrata]
          Length = 787

 Score =  242 bits (618), Expect = 9e-62
 Identities = 130/168 (77%), Positives = 144/168 (85%)
 Frame = -3

Query: 763  CMANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVQVSADL 584
            CMANPRRVKMVAKQI RELSDMLLTD VLQ+AVLPEAALGADRYLSSLTTISDV+VS DL
Sbjct: 560  CMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDL 619

Query: 583  QVVKVFVSVFGDDRGKEVAISGLKSKAKYVRSELGRRMKLRLTPEVRFVEDDSIERGSRV 404
            QVVKV+VSVFGDDRGK+VAI+GLKSKAKYVRSELG+RMKLRLTPEVRF+ED+S+ERGSRV
Sbjct: 620  QVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESMERGSRV 679

Query: 403  IAILDKIKDEKDNSVSEEVGNXXXXXXXXXDKNWEGDDHDEEGIIYVN 260
            IAILDKIK EK +      G          +++WE DD DE+ IIYVN
Sbjct: 680  IAILDKIKAEKGSGDGVNEGLPEPSDLAEDNQDWEVDDPDED-IIYVN 726


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