BLASTX nr result
ID: Lithospermum22_contig00014993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00014993
(2158 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 84 1e-16
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 81 6e-16
emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera] 79 2e-15
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 77 3e-15
emb|CAN81818.1| hypothetical protein VITISV_009635 [Vitis vinifera] 76 3e-15
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 84.0 bits (206), Expect(2) = 1e-16
Identities = 49/145 (33%), Positives = 76/145 (52%)
Frame = -1
Query: 2083 FADDCQIFSNGARSSLSKINQLLKHYQEVSGQVINKEKSTCIMSSKLTESRKKLILYYTA 1904
FADD FS S +K++++L Y + SGQ IN KS+ SSK S K +
Sbjct: 576 FADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILK 635
Query: 1903 FKKEVLPFIYLGIPIYKGKKKVFLFDNLIDXXXXXXXXXKHNHLSFGGRIVLIQYVLSTL 1724
+KE YLG+P + G++K +F +ID LS G+ V+++ VL+++
Sbjct: 636 IRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASM 695
Query: 1723 PLYYLQVMKMPCKVKSKIEKLLNKF 1649
PLY + K+P + KI+ LL +F
Sbjct: 696 PLYSMSCFKLPSALCRKIQSLLTRF 720
Score = 30.8 bits (68), Expect(2) = 1e-16
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 1641 WGGGGALCAPYAEGGLNFRSLDDIFSAAMIQ-AWFRLREGKSIWSKFILARYCTVRHPVC 1465
W L P GGL FR ++ + + + W L +S+ S+ +L +YC +
Sbjct: 733 WVAWSKLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFME 792
Query: 1464 AKLLDSHSKLWNA 1426
KL S W +
Sbjct: 793 CKLPSQPSHGWRS 805
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 81.3 bits (199), Expect(2) = 6e-16
Identities = 47/146 (32%), Positives = 74/146 (50%)
Frame = -1
Query: 2083 FADDCQIFSNGARSSLSKINQLLKHYQEVSGQVINKEKSTCIMSSKLTESRKKLILYYTA 1904
+ DD +F SSL + L Y + SGQ++N KS I + +T++R I+
Sbjct: 428 YVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSF-IFAGGITDTRMNNIVNILG 486
Query: 1903 FKKEVLPFIYLGIPIYKGKKKVFLFDNLIDXXXXXXXXXKHNHLSFGGRIVLIQYVLSTL 1724
F LPF YLG PI+KGK K F + D K + LS GRI L++ V+ ++
Sbjct: 487 FNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRIQLVKSVVQSM 546
Query: 1723 PLYYLQVMKMPCKVKSKIEKLLNKFI 1646
++ + + P K+ ++EK + FI
Sbjct: 547 LVHTMSIYSWPIKILKEMEKWIKNFI 572
Score = 31.2 bits (69), Expect(2) = 6e-16
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 1623 LCAPYAEGGLNFRSLDDIFSAAMIQAWFRLREGKSIWSKFILARYC 1486
+CA Y EGGL +SL + A ++ + L + W+ I +C
Sbjct: 590 ICADYEEGGLGVKSLICLNEATNLKICWNLMQSDEQWANIIRNSWC 635
>emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera]
Length = 2099
Score = 78.6 bits (192), Expect(2) = 2e-15
Identities = 47/146 (32%), Positives = 72/146 (49%)
Frame = -1
Query: 2083 FADDCQIFSNGARSSLSKINQLLKHYQEVSGQVINKEKSTCIMSSKLTESRKKLILYYTA 1904
FA+D FSN L + LL + +SG +N +KS I L ++ +
Sbjct: 1422 FABDTIFFSNTREEDLQTLKSLLLAFGHISGLKVNLDKSN-IYGINLDQAHISRLAETLE 1480
Query: 1903 FKKEVLPFIYLGIPIYKGKKKVFLFDNLIDXXXXXXXXXKHNHLSFGGRIVLIQYVLSTL 1724
K P +YLG+P+ + +D +I+ + +LSFGGRI LIQ L+ +
Sbjct: 1481 CKASGWPILYLGLPLGGNPRAGGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHM 1540
Query: 1723 PLYYLQVMKMPCKVKSKIEKLLNKFI 1646
P YYL + K+P V +KIE+L F+
Sbjct: 1541 PCYYLSLFKLPAXVAAKIERLQRDFL 1566
Score = 32.0 bits (71), Expect(2) = 2e-15
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 18/95 (18%)
Frame = -2
Query: 1647 FLWGGGG-----------ALCAPYAEGGLNFRSLDDIFSAAMIQAWFRL--REGKSIWSK 1507
FLW G G +C P GGL F ++ + + A++ W REG ++W +
Sbjct: 1565 FLWSGIGEGKKDHLVRWDVVCKPKEIGGLGFGNIS-LRNLALLGKWLWRYPREGXALWXQ 1623
Query: 1506 FILARYCTVRHPVCAKLLDSHSKLWNA-----WLH 1417
IL+ Y SHS W+A W H
Sbjct: 1624 VILSIY------------GSHSNGWDANTIVRWSH 1646
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 77.0 bits (188), Expect(2) = 3e-15
Identities = 43/145 (29%), Positives = 75/145 (51%)
Frame = -1
Query: 2083 FADDCQIFSNGARSSLSKINQLLKHYQEVSGQVINKEKSTCIMSSKLTESRKKLILYYTA 1904
FAD +F+ +R + I ++L Y++ SGQ IN +KS S ++ ++K+ +
Sbjct: 685 FADVSLLFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQ 744
Query: 1903 FKKEVLPFIYLGIPIYKGKKKVFLFDNLIDXXXXXXXXXKHNHLSFGGRIVLIQYVLSTL 1724
K+ YLGIP G+ + +FD+L+D K LS G+ +L++ V+ +
Sbjct: 745 MKQVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAI 804
Query: 1723 PLYYLQVMKMPCKVKSKIEKLLNKF 1649
P Y + V K+PC + KI + +F
Sbjct: 805 PTYLMGVYKLPCSIIQKIHSAMARF 829
Score = 33.1 bits (74), Expect(2) = 3e-15
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = -2
Query: 1641 WGGGGALCAPYAEGGLNFRSLDDIFSAAMI--QAWFRLREGKSIWSKFILARYCTVRHPV 1468
W +LC GG+ FR L +F+ A++ QAW +RE S+ ++ + A+Y + +
Sbjct: 842 WKNWDSLCTLKCFGGMGFRDLR-VFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFL 900
Query: 1467 CAKLLDSHSKLWNA 1426
A L S S W +
Sbjct: 901 DAPLGVSTSYSWRS 914
>emb|CAN81818.1| hypothetical protein VITISV_009635 [Vitis vinifera]
Length = 1014
Score = 76.3 bits (186), Expect(2) = 3e-15
Identities = 45/146 (30%), Positives = 72/146 (49%)
Frame = -1
Query: 2083 FADDCQIFSNGARSSLSKINQLLKHYQEVSGQVINKEKSTCIMSSKLTESRKKLILYYTA 1904
FADD FS+ + + +L + +SG +N +KS I L ++ +
Sbjct: 239 FADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSN-IYGINLEQNHLSRLAEMLD 297
Query: 1903 FKKEVLPFIYLGIPIYKGKKKVFLFDNLIDXXXXXXXXXKHNHLSFGGRIVLIQYVLSTL 1724
K P +YLG+P+ K +D +I+ + +LSFGGRI LIQ L+ +
Sbjct: 298 CKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHM 357
Query: 1723 PLYYLQVMKMPCKVKSKIEKLLNKFI 1646
P Y+L + K+P V SKIE++ F+
Sbjct: 358 PCYFLSLFKIPASVASKIERMQRDFL 383
Score = 33.9 bits (76), Expect(2) = 3e-15
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 18/95 (18%)
Frame = -2
Query: 1647 FLWGGGG-----------ALCAPYAEGGLNFRSLDDIFSAAMIQAWFRL--REGKSIWSK 1507
FLW G G +C P + GGL F + I + A++ W REG ++W +
Sbjct: 382 FLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKIS-IRNVALLGKWLWRYPREGSALWHQ 440
Query: 1506 FILARYCTVRHPVCAKLLDSHSKLWNA-----WLH 1417
IL+ Y SHS W+ W H
Sbjct: 441 VILSIY------------GSHSNGWDVNNIVRWSH 463