BLASTX nr result

ID: Lithospermum22_contig00014943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014943
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula] g...   125   3e-27
ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CBI36158.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002299640.1| predicted protein [Populus trichocarpa] gi|2...   122   5e-26
ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24

>ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
           gi|357455013|ref|XP_003597787.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355486828|gb|AES68031.1| Beta-D-galactosidase
           [Medicago truncatula] gi|355486835|gb|AES68038.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 639

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/76 (80%), Positives = 68/76 (89%)
 Frame = -3

Query: 540 RAGGPKKAMEMFLKMKDSMTKPDAVSYNTVLGSLSRAGMFEEAAKLMKEMHSNGFEYDVI 361
           R GGPK+AMEMF KMK S  KPDAVSYNTVLG LSRAG+FEEA KLMKEM+S GFEYD+I
Sbjct: 559 RTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLI 618

Query: 360 TYSSILEAVGKMDEEK 313
           TYSSILEAVGK+DE++
Sbjct: 619 TYSSILEAVGKVDEDR 634


>ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  122 bits (306), Expect = 4e-26
 Identities = 60/75 (80%), Positives = 67/75 (89%)
 Frame = -3

Query: 540 RAGGPKKAMEMFLKMKDSMTKPDAVSYNTVLGSLSRAGMFEEAAKLMKEMHSNGFEYDVI 361
           R GGPK A+EMF +MK+S  KPD VSYNTVLG LSRAGMFEEAAKLMKEM+S GFEYD+I
Sbjct: 558 RTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLI 617

Query: 360 TYSSILEAVGKMDEE 316
           TYSSILEAVGK+DE+
Sbjct: 618 TYSSILEAVGKIDED 632


>emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  122 bits (306), Expect = 4e-26
 Identities = 60/75 (80%), Positives = 67/75 (89%)
 Frame = -3

Query: 540 RAGGPKKAMEMFLKMKDSMTKPDAVSYNTVLGSLSRAGMFEEAAKLMKEMHSNGFEYDVI 361
           R GGPK A+EMF +MK+S  KPD VSYNTVLG LSRAGMFEEAAKLMKEM+S GFEYD+I
Sbjct: 558 RTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLI 617

Query: 360 TYSSILEAVGKMDEE 316
           TYSSILEAVGK+DE+
Sbjct: 618 TYSSILEAVGKIDED 632


>ref|XP_002299640.1| predicted protein [Populus trichocarpa] gi|222846898|gb|EEE84445.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  122 bits (305), Expect = 5e-26
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = -3

Query: 540 RAGGPKKAMEMFLKMKDSMTKPDAVSYNTVLGSLSRAGMFEEAAKLMKEMHSNGFEYDVI 361
           R G P++A EMF+KMKDS+ KPDAVSYNT+LGSLSR+GMFEEAAKLM+EM S GFEYD I
Sbjct: 529 RTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHI 588

Query: 360 TYSSILEAVGKMDEEKVHN 304
           TYSSILEAVGK+DE+   N
Sbjct: 589 TYSSILEAVGKVDEDDEPN 607


>ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  116 bits (290), Expect = 3e-24
 Identities = 56/77 (72%), Positives = 67/77 (87%)
 Frame = -3

Query: 540 RAGGPKKAMEMFLKMKDSMTKPDAVSYNTVLGSLSRAGMFEEAAKLMKEMHSNGFEYDVI 361
           R GGPK A+EMF KMK+S  KPD VS+NT+LG LSRAG+FEEAAKLM+EM S GF+YD+I
Sbjct: 552 RTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLI 611

Query: 360 TYSSILEAVGKMDEEKV 310
           TYSSILEAVGK+D+ K+
Sbjct: 612 TYSSILEAVGKVDDCKM 628


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