BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014931
         (2215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   500   e-139
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              500   e-139
ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|2...   479   e-132
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   467   e-129
dbj|BAJ34201.1| unnamed protein product [Thellungiella halophila]     466   e-128

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  500 bits (1287), Expect = e-139
 Identities = 275/533 (51%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
 Frame = +2

Query: 221  VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVG------T 382
            +LH+QV  + A++PT  + R FP SVL+QEQR+E +P   ++K+++ FQ  +        
Sbjct: 40   MLHDQVAPAVASIPTTIA-RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV 98

Query: 383  TSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLS-QSLILPSDPRESTGQVE 559
             S+  ++    NQ M +F+ Q+L  P  WY LPS +T +K    S I+ S   +    ++
Sbjct: 99   VSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMD 158

Query: 560  LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVE---KEIMVRST 724
            ++   V+                  + KL+ ADL++S  PS+    S     +E  VRST
Sbjct: 159  VKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRST 218

Query: 725  RLHQRRSKNRRVP-IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXX 898
            RL +RRSK RR P +AV E     +   QRK +E  D  DPLRLFL              
Sbjct: 219  RLLERRSKKRRNPKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEE 278

Query: 899  XXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIY 1078
                 QIQ L++L+E++ RL+    R+PT  EWA A GL C+ L+S+L SG  SR+KLIY
Sbjct: 279  SELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIY 338

Query: 1079 ANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRK 1258
            AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLM SVEKFKP AGCRFA+YAYWWIRQ +RK
Sbjct: 339  ANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRK 398

Query: 1259 AIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYST 1438
            AIF HSRT+RLP+N+Y LL KV+EAKR  ++EG H PTKE++A   G++++KL +LL  T
Sbjct: 399  AIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHT 458

Query: 1439 RMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQL 1618
            RMPLSMQQPVW+DQDTT+QEVT+D  IE+PD+S++K+LMRQHVR+LL+VL+PKER+II+L
Sbjct: 459  RMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRL 518

Query: 1619 RFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1777
            RFGI DG  ++LSEIG VFG SKERVRQLE R L+KLKQ LSSHGL +Y +LL
Sbjct: 519  RFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 571


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  500 bits (1287), Expect = e-139
 Identities = 275/533 (51%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
 Frame = +2

Query: 221  VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVG------T 382
            +LH+QV  + A++PT  + R FP SVL+QEQR+E +P   ++K+++ FQ  +        
Sbjct: 29   MLHDQVAPAVASIPTTIA-RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV 87

Query: 383  TSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLS-QSLILPSDPRESTGQVE 559
             S+  ++    NQ M +F+ Q+L  P  WY LPS +T +K    S I+ S   +    ++
Sbjct: 88   VSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMD 147

Query: 560  LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVE---KEIMVRST 724
            ++   V+                  + KL+ ADL++S  PS+    S     +E  VRST
Sbjct: 148  VKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRST 207

Query: 725  RLHQRRSKNRRVP-IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXX 898
            RL +RRSK RR P +AV E     +   QRK +E  D  DPLRLFL              
Sbjct: 208  RLLERRSKKRRNPKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEE 267

Query: 899  XXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIY 1078
                 QIQ L++L+E++ RL+    R+PT  EWA A GL C+ L+S+L SG  SR+KLIY
Sbjct: 268  SELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIY 327

Query: 1079 ANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRK 1258
            AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLM SVEKFKP AGCRFA+YAYWWIRQ +RK
Sbjct: 328  ANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRK 387

Query: 1259 AIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYST 1438
            AIF HSRT+RLP+N+Y LL KV+EAKR  ++EG H PTKE++A   G++++KL +LL  T
Sbjct: 388  AIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHT 447

Query: 1439 RMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQL 1618
            RMPLSMQQPVW+DQDTT+QEVT+D  IE+PD+S++K+LMRQHVR+LL+VL+PKER+II+L
Sbjct: 448  RMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRL 507

Query: 1619 RFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1777
            RFGI DG  ++LSEIG VFG SKERVRQLE R L+KLKQ LSSHGL +Y +LL
Sbjct: 508  RFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 560


>ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|222833385|gb|EEE71862.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  479 bits (1234), Expect = e-132
 Identities = 268/530 (50%), Positives = 347/530 (65%), Gaps = 11/530 (2%)
 Frame = +2

Query: 221  VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGL-------VG 379
            +L EQ   + +++PT S+ ++FP SVL+QEQR+E +PL +  KED+  Q         +G
Sbjct: 30   ILREQATPAVSSIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFKEDRASQATLDRRKTEIG 89

Query: 380  TTSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVE 559
            T+    KD    +Q + +F+ Q+  WPA W           L+  LI           VE
Sbjct: 90   TSGHEGKDSDELDQLVENFEYQLHHWPAYW----------NLTDKLI----------DVE 129

Query: 560  LESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIMVRSTRLHQR 739
              +V+                  +      DL ++L  +   S S+E+  +VRS R   R
Sbjct: 130  PTNVINLAKRALSASKHAAFLADN----NTDL-DNLASTSSSSFSLEEVKIVRSRRHLAR 184

Query: 740  RSKNRRVPIAVD---ETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXXXXX 907
            +S NRR P   D   ET   +  + Q++ S+  D +DPLRLFL                 
Sbjct: 185  QSLNRRAPKTKDLIFETYDSKSADIQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFEL 244

Query: 908  XXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYANF 1087
              QIQ L+ L+ +++RL+ +F R+PT  EWA A GL C  LK +L SG  SREKLI AN 
Sbjct: 245  IAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANL 304

Query: 1088 RMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIF 1267
            RMVVH+AK+YQ RGL L+DLLQ+G++GLMKS+EKFKPQAGCRFATYAYWWIRQ I KAIF
Sbjct: 305  RMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIF 364

Query: 1268 HHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTRMP 1447
             HSRT+RLP+NVYGLL KV EAKR  ++EG HQPT E++A   G+++DKL KLL  TR P
Sbjct: 365  QHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTP 424

Query: 1448 LSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLRFG 1627
            LSMQQ VWSDQ+TT+QE+T+D  IE+PD+S++K+LMR+H+R LLN+LS KER+II+LRFG
Sbjct: 425  LSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFG 484

Query: 1628 IKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1777
            I+DG QKSLSEIGNVFGLSKERVRQLESR LYKLKQ + SHGL AYA+LL
Sbjct: 485  IEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYADLL 534


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 548

 Score =  467 bits (1201), Expect = e-129
 Identities = 260/523 (49%), Positives = 333/523 (63%), Gaps = 4/523 (0%)
 Frame = +2

Query: 221  VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVGTTSSSYK 400
            +LHEQ   +  + PT S  R FP SVL+QEQR+E +PL +  KEDK FQ  V T      
Sbjct: 37   MLHEQAVPAVTSAPTTSIARNFPTSVLLQEQRDEFRPLLNIFKEDKTFQATVDTKQMDPG 96

Query: 401  DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVELESVVQX 580
                     +     +L    SW L           QS+   +D       VE  +V+  
Sbjct: 97   TSDQEGICSDVLDQLILHSNLSWSLT---------MQSITTNTD---ELMVVEPTNVIDL 144

Query: 581  XXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIMVRSTRLHQRRSKNRRV 760
                             C  ++  +   L P+ L + S+E+   VRSTR  +R+SKNRRV
Sbjct: 145  ARKALSASKEAALLAQKCANLDDTVSTGLEPTDLSNFSLEEVKTVRSTRRLERQSKNRRV 204

Query: 761  PIAVD---ETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXXXXXXXQIQAL 928
                +   E     +   Q+K +E  D  DPLRLFL                   Q+Q L
Sbjct: 205  TKTKEIFHEPYSSRRAGVQKKINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDL 264

Query: 929  LKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYANFRMVVHVA 1108
            + L+ ++ + K +F RDPT  EWA A GL    ++S+L SG  SREKLI AN RMVVH+A
Sbjct: 265  MSLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVHIA 324

Query: 1109 KQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFHHSRTVR 1288
            KQYQGRGLSL+DLLQ+GSMGLMKS+EKFKPQ GCRFATYAYWWIRQ +RKAIF HSRT+R
Sbjct: 325  KQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRTIR 384

Query: 1289 LPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTRMPLSMQQPV 1468
            LP+NVY  L KV EAKR  + EG H PTKE++A   G++  +L +LLY  RMPLSMQQ V
Sbjct: 385  LPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVRLERLLYMARMPLSMQQTV 444

Query: 1469 WSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLRFGIKDGSQK 1648
            W+DQ+TT+QE+T+D  +E+P++ ++K+LMR+HV SLLN+L+P+ERKII+LR+GI+DG +K
Sbjct: 445  WADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNILNPRERKIIRLRYGIEDGKKK 504

Query: 1649 SLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1777
            SLSEIG+VFGLSKERVRQLESR LYKLKQ L+SHGL AYA+LL
Sbjct: 505  SLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEAYADLL 547


>dbj|BAJ34201.1| unnamed protein product [Thellungiella halophila]
          Length = 547

 Score =  466 bits (1198), Expect = e-128
 Identities = 264/525 (50%), Positives = 352/525 (67%), Gaps = 6/525 (1%)
 Frame = +2

Query: 221  VLHEQVNSSFA-AMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVGTTSSSY 397
            +LHEQ  +    +    S +R+FPASVL QE REE KPL H+++ED+  Q    T     
Sbjct: 32   MLHEQTATPVVNSRHLTSLSRHFPASVLSQELREESKPLSHALREDRTSQL---TLERRQ 88

Query: 398  KDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVELESVVQ 577
             D L S+++   F+ Q+L     W LL S  T +K   +++ PS         +L  +V 
Sbjct: 89   FDELVSSREDEKFEQQLLHSAGLWNLLISPLTTEKQLPAVVSPS------ADADLCDLVA 142

Query: 578  XXXXXXXXXXXXXXXVSDCKLIEADL-KESLYPSILVSLSVEKEIMVRSTRLHQRRSKNR 754
                           V + +    D  ++SL  S  +SL  EK  +VRS R  +RR+KNR
Sbjct: 143  LAQKALSASKQAALLVENSEADPPDNPRDSLSTSSSMSLP-EKGTIVRSKRQLERRAKNR 201

Query: 755  RVPIAVD---ETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXXXXXXXQIQ 922
            R P + +   E  + +K N ++K  +  D  D L+LFL                    IQ
Sbjct: 202  RAPKSNNMDSEGYVPQKINAKKKMKQGFDTDDALQLFLWGPETKQLLTAKEEAELIAHIQ 261

Query: 923  ALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYANFRMVVH 1102
             L+KL++++++L+ +   +PT  EWA A GL    LKSE+  G+SSREKLI AN R+VVH
Sbjct: 262  HLIKLEKVKTKLESQNGCEPTIGEWAEAMGLSSPVLKSEIHRGRSSREKLITANLRLVVH 321

Query: 1103 VAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFHHSRT 1282
            +AKQYQ RGL+ +DLLQ+GSMGLMKSVEKFKPQ+GCRFATYAYWWIRQ IRK+IF +SRT
Sbjct: 322  IAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRT 381

Query: 1283 VRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTRMPLSMQQ 1462
            +RLP+NVY LL KV EA++ C+++G ++P+KEQ+AS  G+S +KL+KLLY+TR PLSMQQ
Sbjct: 382  IRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVGVSTEKLDKLLYNTRTPLSMQQ 441

Query: 1463 PVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLRFGIKDGS 1642
            P+WSDQDTT+QEVT D+ IE P +S+ K+LMR HVR+LLNVLSPKE++II+LRFGI  G 
Sbjct: 442  PIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNLLNVLSPKEKRIIKLRFGIDGGK 501

Query: 1643 QKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1777
            Q+SLSEIG ++GLSKERVRQLESR LY+LKQ++SSHGL AYA+LL
Sbjct: 502  QRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLNAYADLL 546