BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014823
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    67   1e-09
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 65   8e-09
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                64   1e-08
gb|AAD17361.1| contains similarity to reverse transcriptases: pa...    63   3e-08
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    63   3e-08

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +1

Query: 4    YHKEDGVPKATIKVD--QAYDMVEWESLWVRMEAMGFSQRFIFLLQFCITKANVSINLNG 177
            YHKE   P+  +K+D  +A+D V+W+ L   +EA+ F + F   ++ CI+ A  S+ +NG
Sbjct: 882  YHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNG 941

Query: 178  TLRGWFVSSRGLRLG 222
             L G+F SSRGLR G
Sbjct: 942  ELAGFFGSSRGLRQG 956


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
 Frame = +1

Query: 4   YHKEDGVPKATIKVD--QAYDMVEWESLWVRMEAMGFSQRFIFLLQFCITKANVSINLNG 177
           YHK+   P+  +K+D  +A+D V+W+ L   +EA+ F + F   ++ CI+ A  S+ +NG
Sbjct: 158 YHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNG 217

Query: 178 TLRGWFVSSRGLRLG 222
            L G+F S RGLR G
Sbjct: 218 ELAGFFGSKRGLRQG 232


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = +1

Query: 4   YHKEDGVPKATIKVD--QAYDMVEWESLWVRMEAMGFSQRFIFLLQFCITKANVSINLNG 177
           YHK+    +  IK+D  +A+D V+W  L   + AM FS  FI  +  CIT A+ S+ +NG
Sbjct: 232 YHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNG 291

Query: 178 TLRGWFVSSRGLRLG 222
            L G+F S RGLR G
Sbjct: 292 DLVGYFQSKRGLRQG 306


>gb|AAD17361.1| contains similarity to reverse transcriptases: partial CDS, partial
           [Arabidopsis thaliana] gi|7267375|emb|CAB77936.1|
           putative reverse transcriptase [Arabidopsis thaliana]
          Length = 392

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1   GYHKEDGVPKATIKVD--QAYDMVEWESLWVRMEAMGFSQRFIFLLQFCITKANVSINLN 174
           GYHK+    ++ IK+D  +A+D+V+W  L   +  +    +FI  ++ CI+ A+ SI +N
Sbjct: 12  GYHKDSISTRSAIKIDISKAFDLVQWPFLLATLSTLNLPSKFIKWIELCISTASFSIQIN 71

Query: 175 GTLRGWFVSSRGLRLG 222
           G L G F S+RGLR G
Sbjct: 72  GELSGLFRSARGLRQG 87


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = +1

Query: 4   YHKEDGVPKATIKVD--QAYDMVEWESLWVRMEAMGFSQRFIFLLQFCITKANVSINLNG 177
           YHK+    +  IK+D  +A+D V+W  L      +GF + FI  +  CIT A+ S+ +NG
Sbjct: 585 YHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNG 644

Query: 178 TLRGWFVSSRGLRLG 222
            L G+F SSRGLR G
Sbjct: 645 ELAGYFQSSRGLRQG 659