BLASTX nr result
ID: Lithospermum22_contig00014771
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00014771
(2256 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 558 e-156
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 558 e-156
ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2... 540 e-151
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 511 e-142
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 505 e-140
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 558 bits (1437), Expect = e-156
Identities = 275/439 (62%), Positives = 351/439 (79%), Gaps = 3/439 (0%)
Frame = +3
Query: 693 KVLSKRILELSRLNKVRSVWRLFKSMTYSGLKPDAHALNSLLSCLLRKGMLDNALKIFEF 872
++LSKRIL LSR NKVRSV L+++M +SGL+P +HA NSLLSCLLR MLD+AL++FE
Sbjct: 182 QILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFES 241
Query: 873 MRETETVTGHTYSIVLKAMADTRGCNAAFIMFEELERSGDSRKHFDAIVYNTIISAFGKV 1052
M+ E+ TGH+YS+VLKA+A+ +G ++A MF +LE +K FD I Y T+IS GKV
Sbjct: 242 MKANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKV 301
Query: 1053 GNYIRAEKIWKVMQRNGCSGNSITYRLLICLFVRCGQNDLALDAYHEMVHNDIEPNVDAM 1232
N+ + E+IW+ M+ NG G +TYRLL+ +FVRCGQN+LA+DAY EM+ N ++P DAM
Sbjct: 302 NNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAM 361
Query: 1233 QAIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGKAGKVQLALNVYGVIKS 1412
+AIIGACAKEGKW LA +VF+ ML+ GLKPNL+ACNA+I+S+GK+G V+LA VY V+KS
Sbjct: 362 KAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKS 421
Query: 1413 LGYESDAYTWNALLVALYRANRYSDALFLFERIKKSKSFILNLHIYNTALMCCKSLGRWD 1592
LG+ D YTWNALL ALYRAN+++DAL LFE I++ S + NLH+YNTALM C+ LG W+
Sbjct: 422 LGHTPDVYTWNALLGALYRANQHADALHLFESIREQSSQV-NLHLYNTALMSCQKLGLWN 480
Query: 1593 KALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEVYSHMVEQNHSPDTFTLLSLV 1772
+ALQLLWQ+EAS LSVSS SYNLVIGACEVAR+PEIAL+VY HMV+Q +PDTFT LSL+
Sbjct: 481 RALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLI 540
Query: 1773 RGCIWGSRWEEIEDILSRYAPNSSLFNAAIQGMCLRGMTDSARKLYQKMLENDLKPDGKT 1952
R CIWGS W E+++IL+R + SL+NAAIQGMCLRG +SA+KLY +M ++ LKPDGKT
Sbjct: 541 RSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKT 600
Query: 1953 RALMLQNLRK---RPLKRR 2000
RALMLQNL+K RP RR
Sbjct: 601 RALMLQNLQKDAIRPSNRR 619
Score = 65.5 bits (158), Expect = 6e-08
Identities = 53/262 (20%), Positives = 111/262 (42%), Gaps = 9/262 (3%)
Frame = +3
Query: 1185 YHEMVHNDIEPNVDAMQAIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGK 1364
+ + +H E N + I ++ K ++ M GL+P+ ACN+++S L +
Sbjct: 169 FEDKLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLR 228
Query: 1365 AGKVQLALNVYGVIKSLGYESDAYTWNALLVALYRANRYSDALFLFERI----KKSKSFI 1532
+ AL V+ +K+ + ++++ +L A+ Y AL +F ++ K K F
Sbjct: 229 NEMLDDALRVFESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDF- 286
Query: 1533 LNLHIYNTALMCCKSLGRWDKALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEV 1712
++ Y T + C + W + ++ ++ + L + +Y L++ + E+A++
Sbjct: 287 -DVIAYTTMISICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDA 345
Query: 1713 YSHMVEQNHSPDTFTLLSLVRGCIWGSRWEEIEDILSR-----YAPNSSLFNAAIQGMCL 1877
YS M++ P + +++ C +W+ + PN NA I +
Sbjct: 346 YSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGK 405
Query: 1878 RGMTDSARKLYQKMLENDLKPD 1943
G A ++Y M PD
Sbjct: 406 SGNVKLAFRVYDVMKSLGHTPD 427
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Vitis vinifera]
Length = 546
Score = 558 bits (1437), Expect = e-156
Identities = 275/439 (62%), Positives = 351/439 (79%), Gaps = 3/439 (0%)
Frame = +3
Query: 693 KVLSKRILELSRLNKVRSVWRLFKSMTYSGLKPDAHALNSLLSCLLRKGMLDNALKIFEF 872
++LSKRIL LSR NKVRSV L+++M +SGL+P +HA NSLLSCLLR MLD+AL++FE
Sbjct: 102 QILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFES 161
Query: 873 MRETETVTGHTYSIVLKAMADTRGCNAAFIMFEELERSGDSRKHFDAIVYNTIISAFGKV 1052
M+ E+ TGH+YS+VLKA+A+ +G ++A MF +LE +K FD I Y T+IS GKV
Sbjct: 162 MKANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKV 221
Query: 1053 GNYIRAEKIWKVMQRNGCSGNSITYRLLICLFVRCGQNDLALDAYHEMVHNDIEPNVDAM 1232
N+ + E+IW+ M+ NG G +TYRLL+ +FVRCGQN+LA+DAY EM+ N ++P DAM
Sbjct: 222 NNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAM 281
Query: 1233 QAIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGKAGKVQLALNVYGVIKS 1412
+AIIGACAKEGKW LA +VF+ ML+ GLKPNL+ACNA+I+S+GK+G V+LA VY V+KS
Sbjct: 282 KAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKS 341
Query: 1413 LGYESDAYTWNALLVALYRANRYSDALFLFERIKKSKSFILNLHIYNTALMCCKSLGRWD 1592
LG+ D YTWNALL ALYRAN+++DAL LFE I++ S + NLH+YNTALM C+ LG W+
Sbjct: 342 LGHTPDVYTWNALLGALYRANQHADALHLFESIREQSSQV-NLHLYNTALMSCQKLGLWN 400
Query: 1593 KALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEVYSHMVEQNHSPDTFTLLSLV 1772
+ALQLLWQ+EAS LSVSS SYNLVIGACEVAR+PEIAL+VY HMV+Q +PDTFT LSL+
Sbjct: 401 RALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLI 460
Query: 1773 RGCIWGSRWEEIEDILSRYAPNSSLFNAAIQGMCLRGMTDSARKLYQKMLENDLKPDGKT 1952
R CIWGS W E+++IL+R + SL+NAAIQGMCLRG +SA+KLY +M ++ LKPDGKT
Sbjct: 461 RSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKT 520
Query: 1953 RALMLQNLRK---RPLKRR 2000
RALMLQNL+K RP RR
Sbjct: 521 RALMLQNLQKDAIRPSNRR 539
Score = 65.5 bits (158), Expect = 6e-08
Identities = 53/262 (20%), Positives = 111/262 (42%), Gaps = 9/262 (3%)
Frame = +3
Query: 1185 YHEMVHNDIEPNVDAMQAIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGK 1364
+ + +H E N + I ++ K ++ M GL+P+ ACN+++S L +
Sbjct: 89 FEDKLHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLR 148
Query: 1365 AGKVQLALNVYGVIKSLGYESDAYTWNALLVALYRANRYSDALFLFERI----KKSKSFI 1532
+ AL V+ +K+ + ++++ +L A+ Y AL +F ++ K K F
Sbjct: 149 NEMLDDALRVFESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDF- 206
Query: 1533 LNLHIYNTALMCCKSLGRWDKALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEV 1712
++ Y T + C + W + ++ ++ + L + +Y L++ + E+A++
Sbjct: 207 -DVIAYTTMISICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDA 265
Query: 1713 YSHMVEQNHSPDTFTLLSLVRGCIWGSRWEEIEDILSR-----YAPNSSLFNAAIQGMCL 1877
YS M++ P + +++ C +W+ + PN NA I +
Sbjct: 266 YSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGK 325
Query: 1878 RGMTDSARKLYQKMLENDLKPD 1943
G A ++Y M PD
Sbjct: 326 SGNVKLAFRVYDVMKSLGHTPD 347
>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
predicted protein [Populus trichocarpa]
Length = 487
Score = 540 bits (1392), Expect = e-151
Identities = 259/441 (58%), Positives = 338/441 (76%), Gaps = 1/441 (0%)
Frame = +3
Query: 699 LSKRILELSRLNKVRSVWRLFKSMTYSGLKPDAHALNSLLSCLLRKGMLDNALKIFEFMR 878
LS+RIL LSR NK+RS +L +SM +SGL+P+ HA NSLLSCL+R + ++AL++FE+M+
Sbjct: 50 LSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRHELHEDALRVFEYMK 109
Query: 879 ETETVTGHTYSIVLKAMADTRGCNAAFIMFEELERSGDSRKHFDAIVYNTIISAFGKVGN 1058
+ E TGH YS++LKA+A T+GC++A MF ELE +K FD IVYNT+IS GK N
Sbjct: 110 KNEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVIVYNTMISVCGKEKN 169
Query: 1059 YIRAEKIWKVMQRNGCSGNSITYRLLICLFVRCGQNDLALDAYHEMVHNDIEPNVDAMQA 1238
++ E+IW+ M+ N G +TY LL+ +FVRCG+N+LAL+AY EMV N ++P D + A
Sbjct: 170 WVETERIWRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEMVQNGLKPREDTLHA 229
Query: 1239 IIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGKAGKVQLALNVYGVIKSLG 1418
+IGAC+K+G W LA N+F++ML GLKPNL+ACNA+I+ LGKAG+++LA V+ ++KSLG
Sbjct: 230 VIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEIKLAFKVFKILKSLG 289
Query: 1419 YESDAYTWNALLVALYRANRYSDALFLFERIKKSKSFILNLHIYNTALMCCKSLGRWDKA 1598
+ D YTWNALL LYRAN++ DAL LFER+K+ ++ +LN H+YNTALM C+ LG WD+A
Sbjct: 290 HTPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLNEHLYNTALMSCQKLGLWDRA 349
Query: 1599 LQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEVYSHMVEQNHSPDTFTLLSLVRG 1778
LQL+WQ EAS LSVS+ SYNL IGACEVAR+PE+ALEVY HMV Q PDTFT LSL+R
Sbjct: 350 LQLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQKCPPDTFTYLSLIRS 409
Query: 1779 CIWGSRWEEIEDILSRYAPNSSLFNAAIQGMCLRGMTDSARKLYQKMLENDLKPDGKTRA 1958
CIW S W+E+E+IL + AP+ SL+NA I GMCLRG T+SA+KLY KM ++ LKPDG A
Sbjct: 410 CIWASLWDEVEEILDQVAPDVSLYNAVIHGMCLRGKTESAKKLYMKMGKSGLKPDG---A 466
Query: 1959 LMLQNLRKRPLKR-R*GNCSR 2018
LMLQNLRK KR R C R
Sbjct: 467 LMLQNLRKNSTKRSRFSTCRR 487
Score = 67.0 bits (162), Expect = 2e-08
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Frame = +3
Query: 1197 VHNDIEPNVDAMQAIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGKAGKV 1376
VH E + + + I ++ K A + M GL+PN ACN+++S L +
Sbjct: 39 VHFLEETDENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRHELH 98
Query: 1377 QLALNVYGVIKSLGYESDAYTWNALLVALYRANRYSDALFLFERI----KKSKSFILNLH 1544
+ AL V+ +K + + ++ +L A+ AL +F + ++ K F ++
Sbjct: 99 EDALRVFEYMKK-NEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDF--DVI 155
Query: 1545 IYNTALMCCKSLGRWDKALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEVYSHM 1724
+YNT + C W + ++ ++ +D + +Y+L++ R E+ALE YS M
Sbjct: 156 VYNTMISVCGKEKNWVETERIWRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEM 215
Query: 1725 VEQNHSPDTFTLLSLVRGCIWGSRWEEIEDILSR-----YAPNSSLFNAAIQGMCLRGMT 1889
V+ P TL +++ C W+ +I PN NA I + G
Sbjct: 216 VQNGLKPREDTLHAVIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEI 275
Query: 1890 DSARKLYQKMLENDLKPDGKTRALMLQNL 1976
A K+++ + PD T +L L
Sbjct: 276 KLAFKVFKILKSLGHTPDEYTWNALLSGL 304
>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 511 bits (1316), Expect = e-142
Identities = 254/435 (58%), Positives = 327/435 (75%)
Frame = +3
Query: 696 VLSKRILELSRLNKVRSVWRLFKSMTYSGLKPDAHALNSLLSCLLRKGMLDNALKIFEFM 875
+LSKRIL LSR NKVRS L +SM +GL P HALNSLL+CLLR + + L+IFEFM
Sbjct: 151 MLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFM 210
Query: 876 RETETVTGHTYSIVLKAMADTRGCNAAFIMFEELERSGDSRKHFDAIVYNTIISAFGKVG 1055
+ E TGHTYS+VLKA+A+ G +A MF+ E + FDAIVYNT+IS GK
Sbjct: 211 KLNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQ-FDAIVYNTMISICGKDN 269
Query: 1056 NYIRAEKIWKVMQRNGCSGNSITYRLLICLFVRCGQNDLALDAYHEMVHNDIEPNVDAMQ 1235
N++ AE+ W++M++NGCS ITY LL+ FVRC QN+LA+D Y +MV N +P D MQ
Sbjct: 270 NWVEAERTWRLMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQ 329
Query: 1236 AIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGKAGKVQLALNVYGVIKSL 1415
AIIGA +KEGKW A VF+DML GL+PN V+ NA+I++LGKA +V LA +VY V+KS+
Sbjct: 330 AIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSM 389
Query: 1416 GYESDAYTWNALLVALYRANRYSDALFLFERIKKSKSFILNLHIYNTALMCCKSLGRWDK 1595
G+ D YTWNALL ALY+ANRYSDA+ LFE +K+ K LN+HIYNT LM C LG W++
Sbjct: 390 GHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTILMSCSKLGLWER 448
Query: 1596 ALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEVYSHMVEQNHSPDTFTLLSLVR 1775
A+Q+LW++E S LS+S+ SYN+V+ ACE+AR+PEIAL+VY MV Q H+PDTFT LSL+R
Sbjct: 449 AVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIR 508
Query: 1776 GCIWGSRWEEIEDILSRYAPNSSLFNAAIQGMCLRGMTDSARKLYQKMLENDLKPDGKTR 1955
CIWGS W+E+E +L++ AP+ S++N IQGMCLRG +D A+KLY KM EN ++PDGKTR
Sbjct: 509 CCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTR 568
Query: 1956 ALMLQNLRKRPLKRR 2000
ALMLQNL K P +R+
Sbjct: 569 ALMLQNLPKDPARRK 583
>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 505 bits (1301), Expect = e-140
Identities = 252/435 (57%), Positives = 325/435 (74%)
Frame = +3
Query: 696 VLSKRILELSRLNKVRSVWRLFKSMTYSGLKPDAHALNSLLSCLLRKGMLDNALKIFEFM 875
+LSKRIL LSR NKVRS L +SM +GL P HALNSLL+CLLR + + L+IFEFM
Sbjct: 151 MLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFM 210
Query: 876 RETETVTGHTYSIVLKAMADTRGCNAAFIMFEELERSGDSRKHFDAIVYNTIISAFGKVG 1055
+ E TGHTYS+VLKA+A+ G +A MF+ E + FDAIVYNT+IS GK
Sbjct: 211 KLNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQ-FDAIVYNTMISICGKDN 269
Query: 1056 NYIRAEKIWKVMQRNGCSGNSITYRLLICLFVRCGQNDLALDAYHEMVHNDIEPNVDAMQ 1235
N++ AE+ W++M++NGC ITY LL+ FVRC QN+LA+D Y +MV N +P D MQ
Sbjct: 270 NWVEAERTWRLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQ 329
Query: 1236 AIIGACAKEGKWHLAFNVFEDMLSRGLKPNLVACNAVISSLGKAGKVQLALNVYGVIKSL 1415
AIIGA +KEGKW A VF+DML GL+PN V+ NA+I++LGKA +V LA +VY V+KS+
Sbjct: 330 AIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSM 389
Query: 1416 GYESDAYTWNALLVALYRANRYSDALFLFERIKKSKSFILNLHIYNTALMCCKSLGRWDK 1595
G+ D YTWNALL ALY+ANRYSDA+ LFE +K+ K LN+HIYNT LM C LG W++
Sbjct: 390 GHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREK-VQLNIHIYNTILMSCSKLGLWER 448
Query: 1596 ALQLLWQIEASDLSVSSESYNLVIGACEVARRPEIALEVYSHMVEQNHSPDTFTLLSLVR 1775
A+Q+LW++E S LS+S+ SYN+V+ ACE+AR+PEIAL+VY MV Q +PDTFT LSL+R
Sbjct: 449 AVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSLIR 508
Query: 1776 GCIWGSRWEEIEDILSRYAPNSSLFNAAIQGMCLRGMTDSARKLYQKMLENDLKPDGKTR 1955
CIWGS W+E+E +L++ AP+ S++N IQGMCLRG +D A+KLY KM EN ++PDGKTR
Sbjct: 509 CCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTR 568
Query: 1956 ALMLQNLRKRPLKRR 2000
ALMLQNL K P +R+
Sbjct: 569 ALMLQNLPKDPARRK 583