BLASTX nr result
ID: Lithospermum22_contig00014727
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00014727
(2256 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 521 e-145
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 494 e-137
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 493 e-136
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 482 e-133
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin... 480 e-133
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative
[Ricinus communis]
Length = 578
Score = 521 bits (1343), Expect = e-145
Identities = 294/582 (50%), Positives = 368/582 (63%), Gaps = 35/582 (6%)
Frame = -3
Query: 2104 MDTFQAAKVVHERILKLETEQIARKVVGYVYLQDNPDQEMIRLAMGPDYIIQNWIXXXXX 1925
MD ++ KVV+ RI KLE E ++ K++GY+ LQD+ ++EMIRLA PD +I + I
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVS-KIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKS 59
Query: 1924 XXXXXXXXXXXXXXXXXXXXXXXPDPLLQYARFPSHS--PRYRVLPPRLAGARRWEHWQT 1751
D LQ+ F S P R + W+ T
Sbjct: 60 DLGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVT 119
Query: 1750 -EHQAVHNSDFEPLPYTDSVLDDYRLQR--QLMGSEDQFEPVDSAASGFS-DYFCNEGGV 1583
+ Q V N DF Y+D+V +DYRLQ Q + +DQFE S S FS +YF +E +
Sbjct: 120 GDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPAL 179
Query: 1582 NNISQRHNQNVQGGLEGQVKTCHYFNKGFCKHGSNCRYFHGQSLPENYSHMFGPNANEFG 1403
+ R + ++ E +K CHYF+KG+CKHG+NCRY HG +PE +S +F +N+F
Sbjct: 180 GPRTNRRSPSLP---EFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFS 236
Query: 1402 YEDQVFSPGSLERLEMEITELLKSRGGSAISIASLPMLYFEMYGKTLQAEGYLTESQRHG 1223
++ V SPGSLE+LEME+ ELLKSR G +SIASLPM+Y+E YGKTLQAEGYLTESQRHG
Sbjct: 237 NDEHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHG 296
Query: 1222 KAGFSLTKLLARLNNTIRLIDRPHGQHAVLLAEDAPSYVGVRAERNDPGPIVSGSRQIYL 1043
KAG+SLTKLLARL N+IR+IDRPHGQH+V+L ED P Y+ ERNDPG IV+GSRQIYL
Sbjct: 297 KAGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYL 356
Query: 1042 TFPAESTFTEEDVSNYFSTFGPVQDVRIPCQQKRMFGFVTFVSSDTVKNILEKGNPHYVC 863
TFPAES FTE DVS YFS FGPVQDVRIPCQQKRMFGFVTF+ +TVK IL KGNPHYVC
Sbjct: 357 TFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVC 416
Query: 862 GARVLVKPYREKCRLFERKYHDKFDPSMYSS------------------QARFLREQLIE 737
GARVLVKPYREK RL +RK+ +K MY+S +R LR+QL+E
Sbjct: 417 GARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRKQLME 476
Query: 736 EHEKALENEMRRLNNLKLSQNSNANQSYFDRSQD------HHNKFPSAEQLNYMRNVLSG 575
E+E ALE E RRL L S +QSY S D H +FPSAE+ NY+ +VL+
Sbjct: 477 ENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSEEHAEFPSAERFNYLLDVLNN 536
Query: 574 GQATDN--HRAEIKYTDPDS---NLPDSPFAPVVASNVSPVM 464
G +++ R Y D DS NLP+SPFA + S +S VM
Sbjct: 537 GSSSEGKFRRISTNYNDQDSQGINLPESPFASPIRSGISTVM 578
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
vinifera]
Length = 572
Score = 494 bits (1271), Expect = e-137
Identities = 288/583 (49%), Positives = 368/583 (63%), Gaps = 37/583 (6%)
Frame = -3
Query: 2104 MDTFQAAKVVHERILKLETEQIARKVVGYVYLQDNPDQEMIRLAMGPDYIIQNWIXXXXX 1925
MD ++ KVV+ RI KLE E ++ K++GY+ LQD+ +++MIR A D IQ I
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVS-KIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKA 59
Query: 1924 XXXXXXXXXXXXXXXXXXXXXXXPDPL-LQYARFPSHSPRYRVLPPRLAGARRWE-HWQT 1751
L LQ+ F S R P G W+
Sbjct: 60 ELGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASAR--PFPSPRPGNSYWDPQVNG 117
Query: 1750 EHQAVHN-SDFEPLPYTDSVLDDYRLQRQL--MGSEDQFEPVDSAASGFS-DYFCNEGGV 1583
+ Q VH DF P Y+DS+ DD+RLQ Q+ + EDQ E +S S FS Y+ E +
Sbjct: 118 DQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYYYAEQAL 175
Query: 1582 NNISQRHNQNVQGGLEGQVKTCHYFNKGFCKHGSNCRYFHGQSLPENYSHMFGPNANEFG 1403
N R + ++ E +K CHYFNKGFCKHG++CRYFHG + E++S +F P ANE
Sbjct: 176 NTRISRRSPSLP---EFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELP 232
Query: 1402 YEDQVFSPGSLERLEMEITELLKSRGGSAISIASLPMLYFEMYGKTLQAEGYLTESQRHG 1223
+D VF PGSLE+LE+E+TELLKSR G +SIASLPM+Y+E YG+TLQAEGYLTESQRHG
Sbjct: 233 NDDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHG 292
Query: 1222 KAGFSLTKLLARLNNTIRLIDRPHGQHAVLLAEDAPSYVGVRAERNDPGPIVSGSRQIYL 1043
KAG+SLTKLLARL N+IRLIDRPHGQH+V+LAED P Y+ V ER+DPG IV S+QIYL
Sbjct: 293 KAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYL 352
Query: 1042 TFPAESTFTEEDVSNYFSTFGPVQDVRIPCQQKRMFGFVTFVSSDTVKNILEKGNPHYVC 863
TFPA+STFTE+DVSNYF+ FGPVQDVRIPCQQKRMFGFVTFV ++TVK IL KGNPHY+C
Sbjct: 353 TFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYIC 412
Query: 862 GARVLVKPYREKC--RLFERKYHDKF--------DPSMYS-----SQARFLR-EQLIEEH 731
GARVLVKPYREK R +R+ H + D + S +R LR +QL+EEH
Sbjct: 413 GARVLVKPYREKASSRTVDRRQHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEH 472
Query: 730 EKALENEMRRLNNLKLSQNSNANQSYFDRSQDHHN-----------KFPSAEQLNYMRNV 584
E+ALE E RRL+ L+L+ + YF S D +FPSAE+LNY+ V
Sbjct: 473 EQALELERRRLSELQLTPKT--AHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEV 530
Query: 583 LSGGQATDNHRAEIKYTDPDS----NLPDSPFAPVVASNVSPV 467
L+ G +++ Y + +S NLP+SPFA + +++S V
Sbjct: 531 LNNGSTSEDR--STNYNEQESSQGLNLPESPFASPIRNSISTV 571
>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 493 bits (1268), Expect = e-136
Identities = 282/582 (48%), Positives = 361/582 (62%), Gaps = 35/582 (6%)
Frame = -3
Query: 2104 MDTFQAAKVVHERILKLETEQIARKVVGYVYLQDNPDQEMIRLAMGPDYIIQNWIXXXXX 1925
MD ++ KVV+ RI ++E E + K++GY+ LQ++ ++EMIRLA PD +I I
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVG-KIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKS 59
Query: 1924 XXXXXXXXXXXXXXXXXXXXXXXPDPLLQYA--RFPSHSPRYRVLPPRLAGARRWEHWQT 1751
D LQ+ S P + R AG+
Sbjct: 60 DLGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGS-------- 111
Query: 1750 EHQAVHNSDFEPLPYTDSVLDDYRLQRQL--MGSEDQFEPVDSAASGFSDYFCNEGGVNN 1577
+ D+ + DYRLQ Q+ + S+DQ E V+S S S YF E +
Sbjct: 112 --------------FWDAQVTDYRLQNQMQFLTSDDQLEFVNSDFS--SSYFYPEPALGP 155
Query: 1576 ISQRHNQNVQGGLEGQVKTCHYFNKGFCKHGSNCRYFHGQSLPENYSHMFGPNANEFGYE 1397
+ R + ++ E VK CHYFNKGFCKHG+NCRYFHG +PE++S + N+NE +
Sbjct: 156 RTSRRSPSLP---EFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIAND 212
Query: 1396 DQVFSPGSLERLEMEITELLKSRGGSAISIASLPMLYFEMYGKTLQAEGYLTESQRHGKA 1217
+ SPGSLE+LE+E+TELLKSR G +SIASLPM+Y+E YG+ LQAEGYLTESQRHGKA
Sbjct: 213 EHFISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKA 272
Query: 1216 GFSLTKLLARLNNTIRLIDRPHGQHAVLLAEDAPSYVGVRAERNDPGPIVSGSRQIYLTF 1037
G+SLTKLLARL N+IRLIDRPHGQH+V+L ED P Y+ ERNDPG IV+GSRQIYLTF
Sbjct: 273 GYSLTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTF 332
Query: 1036 PAESTFTEEDVSNYFSTFGPVQDVRIPCQQKRMFGFVTFVSSDTVKNILEKGNPHYVCGA 857
PAESTFTE+DVSNYFS FGPVQDVRIPCQQKRMFGFVTFV ++TVK IL KGNPH+VCGA
Sbjct: 333 PAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGA 392
Query: 856 RVLVKPYREKCRLFERKYHDKFDPSMYSSQ------------------ARFLREQLIEEH 731
RVLVKPYREK RL +RKY +K + SQ +R LR+QL+EEH
Sbjct: 393 RVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEEH 452
Query: 730 EKALENEMRRLNNLKLSQNSNANQSY-------FDRSQDHHNKFPSAEQLNYMRNVLSGG 572
E+ALE E RRL+ +L+ A +Y F S++ ++FPSAE NY +VL+ G
Sbjct: 453 EQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSEEQADQFPSAEHFNYWFDVLNNG 512
Query: 571 QAT-DNHR-AEIKYTDPDS----NLPDSPFAPVVASNVSPVM 464
+ + HR ++ DS NLP+SPFA + +S V+
Sbjct: 513 STSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGISTVI 554
>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein, putative
[Ricinus communis]
Length = 551
Score = 482 bits (1241), Expect = e-133
Identities = 281/563 (49%), Positives = 350/563 (62%), Gaps = 16/563 (2%)
Frame = -3
Query: 2104 MDTFQAAKVVHERILKLETEQIARKVVGYVYLQDNPDQEMIRLAMGPDYIIQNWIXXXXX 1925
MD + +VV +I K+E E + K++GY+ LQD DQEMI LAM PD +IQ+ I
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVT-KIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKA 59
Query: 1924 XXXXXXXXXXXXXXXXXXXXXXXPDPLL-QYARFPSHSPRYRVLPPRLAGARRWEHWQTE 1748
Q+ F S R + P + W+++
Sbjct: 60 ELNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPSTY--WESQ 117
Query: 1747 HQAVHNSDFEPLPYTDSVLDDYRLQRQLMGSEDQFEPVDSAASGF-SDYFCNEGGVNNIS 1571
+ H+SDF P+ Y DS + + + Q Q + EDQ E V+ +GF SD F ++ + +
Sbjct: 118 VASKHSSDFVPMTYQDS-MTELQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAALGSFR 176
Query: 1570 QRHNQNVQGGLEGQVKTCHYFNKGFCKHGSNCRYFHGQSLPENYSHMFGPNANEFGYEDQ 1391
R + E +K CHYFNKG+CKHGSNCRYFHGQ S F P + EDQ
Sbjct: 177 ARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQ-----ISDSF-PRTFDAINEDQ 230
Query: 1390 VFSPGSLERLEMEITELLKSRGGSAISIASLPMLYFEMYGKTLQAEGYLTESQRHGKAGF 1211
+FSPGSLE+LE+EI ELLKSR G+ +SIASLPMLY+E YGK LQA+GYLTESQRHGKAG+
Sbjct: 231 IFSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGKAGY 290
Query: 1210 SLTKLLARLNNTIRLIDRPHGQHAVLLAEDAPSYVGVRAERNDPGPIVSGSRQIYLTFPA 1031
SLTKLLARL N+IRLIDRPHGQHAV+LAED P Y+ R +RNDPGPIVSGSRQIYLTFPA
Sbjct: 291 SLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPGPIVSGSRQIYLTFPA 350
Query: 1030 ESTFTEEDVSNYFSTFGPVQDVRIPCQQKRMFGFVTFVSSDTVKNILEKGNPHYVCGARV 851
ESTFTE+DVSNYF+ FGPV+DVRIPCQQKRMFGFVTF S+DTVK IL KGNPH+VC ARV
Sbjct: 351 ESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFVCNARV 410
Query: 850 LVKPYREKCRL---FERKYHDKFDPSMYS-----SQARFLREQLIEEHEKALENEMR-RL 698
LVKPYRE L F Y D D ++S +R LR+QL+EE E+ALE E R RL
Sbjct: 411 LVKPYRENQSLLXYFSSHYVD-MDAELHSMSRGYETSRLLRKQLLEEQEQALELERRQRL 469
Query: 697 NNLKLSQNSNANQSYFDRSQDHHNKFPSAEQLNYMRNVLSGGQATDN--HRAEIKYTDPD 524
L++ + ++ SYFD D +L Y G D+ E Y D D
Sbjct: 470 AELRI-RKPVSHHSYFDYPMDGFKVSEDNFELPYHVLDFINGSGNDDKIRHIETNYADQD 528
Query: 523 S---NLPDSPFAPVVASNVSPVM 464
S NLP+SPFA + S++S ++
Sbjct: 529 SQGLNLPESPFASAIPSSISTII 551
>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
product [Vitis vinifera]
Length = 544
Score = 480 bits (1235), Expect = e-133
Identities = 285/582 (48%), Positives = 357/582 (61%), Gaps = 36/582 (6%)
Frame = -3
Query: 2104 MDTFQAAKVVHERILKLETEQIARKVVGYVYLQDNPDQEMIRLAMGPDYIIQNWIXXXXX 1925
MD ++ VV RI KLE E ++ K++GY+ ++ EMIRLA GPD I+ I
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVS-KIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVK- 58
Query: 1924 XXXXXXXXXXXXXXXXXXXXXXXPDPLLQYARFPSH-SPRYRVLPPRLAGARRWEHWQTE 1748
++ P+ SP PP W + +
Sbjct: 59 ---------------------------IELGLIPNPPSPISPHFPPLSPSTGSW--FPSS 89
Query: 1747 HQAVHNSDFEPLPYTDSVLDDYRLQRQLMGSEDQFEPVDSAASGFS-DYFCNEGGVNNIS 1571
+ N + T+ + DY LQ Q +G E+Q E V+ A G S DY+ E V N+S
Sbjct: 90 SPSPVNRYLQHA--TEQLPKDYSLQSQPLGLEEQLEQVNPAILGVSGDYYYPETAVENLS 147
Query: 1570 QRHNQNVQGGLEGQVKTCHYFNKGFCKHGSNCRYFHGQSLPENYSHMFGPNANEFGYEDQ 1391
R G E VK CHYFNKGFCKHG+NCRY H Q PE + P AN+ +D
Sbjct: 148 VRTGPRSLIGSEFPVKVCHYFNKGFCKHGNNCRYLHAQVFPE----VLSPIANDLANDDH 203
Query: 1390 VFSPGSLERLEMEITELLKSRGGSAISIASLPMLYFEMYGKTLQAEGYLTESQRHGKAGF 1211
+FSPGS+E+LE+E+TELLKSR G+ +SIASLPM+Y+E YG+ LQAEGYLTESQRHGKAG+
Sbjct: 204 IFSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGY 263
Query: 1210 SLTKLLARLNNTIRLIDRPHGQHAVLLAEDAPSYVGVRAERNDPGPIVSGSRQIYLTFPA 1031
SLTKLLARL TIRLIDRPHGQH+V+LAED P Y+ R+ER+DPGPIVSGSRQIYLTFPA
Sbjct: 264 SLTKLLARLR-TIRLIDRPHGQHSVILAEDVPKYMESRSERSDPGPIVSGSRQIYLTFPA 322
Query: 1030 ESTFTEEDVSNYFSTFGPVQDVRIPCQQKRMFGFVTFVSSDTVKNILEKGNPHYVCGARV 851
ESTFTEEDVS+YFSTFG V+DVRIPCQQKRMFGFVTF SSDTVK+IL KG+PHYVCGARV
Sbjct: 323 ESTFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARV 382
Query: 850 LVKPYREKCRLFERKYHDKFDPSMY------------------SSQARFLREQLIEEHEK 725
LVKPYREK R +RKY +KF+ SMY +R LR+Q++EE E
Sbjct: 383 LVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIMEEQEF 442
Query: 724 A--LENEMRRLNNLKLSQNSNANQSYFDRSQD---------HHNKFPSAEQLNYMRNVLS 578
A LE E RRL+ L+L++N ANQ + S D +H+KFP+ NY +V +
Sbjct: 443 AQDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAHANHSKFPTVVHSNYPLDVSN 502
Query: 577 GGQATDNH-----RAEIKYTDPDSNLPDSPFAPVVASNVSPV 467
G +D+ I + LPDSPFA + S++S +
Sbjct: 503 NGSTSDDKPWRAVNNPIDHKSSGLELPDSPFAFPIGSSISTI 544