BLASTX nr result

ID: Lithospermum22_contig00014702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014702
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20234.3| unnamed protein product [Vitis vinifera]              278   2e-79
ref|XP_002282870.1| PREDICTED: RNA exonuclease 4-like [Vitis vin...   278   2e-79
ref|NP_566499.1| exonuclease-like protein [Arabidopsis thaliana]...   279   1e-78
gb|ADN33800.1| RNA exonuclease [Cucumis melo subsp. melo]             273   9e-77
ref|XP_004146040.1| PREDICTED: RNA exonuclease 4-like [Cucumis s...   272   2e-76

>emb|CBI20234.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  278 bits (711), Expect(2) = 2e-79
 Identities = 145/214 (67%), Positives = 170/214 (79%), Gaps = 11/214 (5%)
 Frame = -1

Query: 932 QLNPNWAQLLQKL----------NTNSYTKRVPQTILGKRKARSIEEPIAPKPNPLLPTS 783
           QLNPNW QL QKL          ++N    +  +TILGKRK R   EP A + N L+PT+
Sbjct: 33  QLNPNWTQLQQKLKIHASRPSQKSSNGAEPQTSKTILGKRKERPDAEPDASQRNILIPTN 92

Query: 782 TDCSITNVLAMDCEMVGVGPLGNKNALGRVTLINKWGNVIYDEFVRPIEHVVNFRSEISG 603
           TD S+T+ +AMDCEMVGVG  GNK+ALGRVTL+NKWGNVIYDE+VRP+E VV+FR+EISG
Sbjct: 93  TDSSLTDAVAMDCEMVGVGSEGNKSALGRVTLVNKWGNVIYDEYVRPVEWVVDFRTEISG 152

Query: 602 IRSSDLRKAKNFNVVQKKVAELIKGRILVGHALHNDLKALLLSHPKNDIRDTSEYQPLLK 423
           IR  DL+KAK+F  VQ++VAELIKGR+LVGHAL NDLKALLLSHPK D+RDTSE +  LK
Sbjct: 153 IRPRDLKKAKDFQTVQRQVAELIKGRLLVGHALRNDLKALLLSHPKVDMRDTSECELFLK 212

Query: 422 EGQRR-GLRHLAAEILGVEIQNGEHCPVEDARAA 324
           E +RR  LRHLAAE LGV+IQNGEHCPVEDARAA
Sbjct: 213 EERRRVALRHLAAEFLGVKIQNGEHCPVEDARAA 246



 Score = 45.1 bits (105), Expect(2) = 2e-79
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 262 VEDARAAMVLYQKYRKQWEKSFKDYI 185
           VEDARAAM+LYQ+ RKQWEK+ KD I
Sbjct: 240 VEDARAAMLLYQRNRKQWEKNIKDQI 265


>ref|XP_002282870.1| PREDICTED: RNA exonuclease 4-like [Vitis vinifera]
          Length = 277

 Score =  278 bits (711), Expect(2) = 2e-79
 Identities = 145/214 (67%), Positives = 170/214 (79%), Gaps = 11/214 (5%)
 Frame = -1

Query: 932 QLNPNWAQLLQKL----------NTNSYTKRVPQTILGKRKARSIEEPIAPKPNPLLPTS 783
           QLNPNW QL QKL          ++N    +  +TILGKRK R   EP A + N L+PT+
Sbjct: 15  QLNPNWTQLQQKLKIHASRPSQKSSNGAEPQTSKTILGKRKERPDAEPDASQRNILIPTN 74

Query: 782 TDCSITNVLAMDCEMVGVGPLGNKNALGRVTLINKWGNVIYDEFVRPIEHVVNFRSEISG 603
           TD S+T+ +AMDCEMVGVG  GNK+ALGRVTL+NKWGNVIYDE+VRP+E VV+FR+EISG
Sbjct: 75  TDSSLTDAVAMDCEMVGVGSEGNKSALGRVTLVNKWGNVIYDEYVRPVEWVVDFRTEISG 134

Query: 602 IRSSDLRKAKNFNVVQKKVAELIKGRILVGHALHNDLKALLLSHPKNDIRDTSEYQPLLK 423
           IR  DL+KAK+F  VQ++VAELIKGR+LVGHAL NDLKALLLSHPK D+RDTSE +  LK
Sbjct: 135 IRPRDLKKAKDFQTVQRQVAELIKGRLLVGHALRNDLKALLLSHPKVDMRDTSECELFLK 194

Query: 422 EGQRR-GLRHLAAEILGVEIQNGEHCPVEDARAA 324
           E +RR  LRHLAAE LGV+IQNGEHCPVEDARAA
Sbjct: 195 EERRRVALRHLAAEFLGVKIQNGEHCPVEDARAA 228



 Score = 45.1 bits (105), Expect(2) = 2e-79
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -2

Query: 262 VEDARAAMVLYQKYRKQWEKSFKDYI 185
           VEDARAAM+LYQ+ RKQWEK+ KD I
Sbjct: 222 VEDARAAMLLYQRNRKQWEKNIKDQI 247


>ref|NP_566499.1| exonuclease-like protein [Arabidopsis thaliana]
           gi|21593535|gb|AAM65502.1| exonuclease, putative
           [Arabidopsis thaliana] gi|90186238|gb|ABD91495.1|
           At3g15080 [Arabidopsis thaliana]
           gi|110737668|dbj|BAF00773.1| putative exonuclease
           [Arabidopsis thaliana] gi|195971099|gb|ACG60894.1|
           exonuclease domain-containing protein [Arabidopsis
           thaliana] gi|332642093|gb|AEE75614.1| exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 275

 Score =  279 bits (713), Expect(2) = 1e-78
 Identities = 141/223 (63%), Positives = 170/223 (76%), Gaps = 7/223 (3%)
 Frame = -1

Query: 971 EEKGEEYLVFEAAQLNPNWAQLLQKLNTNSY-------TKRVPQTILGKRKARSIEEPIA 813
           + K ++ +  +  QLNPNW+ L QKL ++S+           P +ILGKRK R   E   
Sbjct: 6   KRKPKKKITPKPVQLNPNWSLLQQKLKSDSHGNTRKSSNPENPSSILGKRKERPDSEVDV 65

Query: 812 PKPNPLLPTSTDCSITNVLAMDCEMVGVGPLGNKNALGRVTLINKWGNVIYDEFVRPIEH 633
           PK NPL P + D S+T+ +AMDCEMVGV   G K+ALGRVTL+NKWGNV+YDEFVRP+EH
Sbjct: 66  PKINPLAPVNDDSSLTDEVAMDCEMVGVSQ-GTKSALGRVTLVNKWGNVLYDEFVRPVEH 124

Query: 632 VVNFRSEISGIRSSDLRKAKNFNVVQKKVAELIKGRILVGHALHNDLKALLLSHPKNDIR 453
           VV+FR+ ISGIR  DLRKAK+F V Q KVAELIKG+ILVGHALHNDLKALLL+HPK DIR
Sbjct: 125 VVDFRTSISGIRPRDLRKAKDFRVAQTKVAELIKGKILVGHALHNDLKALLLTHPKKDIR 184

Query: 452 DTSEYQPLLKEGQRRGLRHLAAEILGVEIQNGEHCPVEDARAA 324
           DT EYQP LK   R+ L+HLA+EILG +IQNGEHCP++DARAA
Sbjct: 185 DTGEYQPFLKGKTRKSLKHLASEILGADIQNGEHCPIDDARAA 227



 Score = 42.0 bits (97), Expect(2) = 1e-78
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -2

Query: 262 VEDARAAMVLYQKYRKQWEKSFKD 191
           ++DARAAM+LYQK RK+WEK+ KD
Sbjct: 221 IDDARAAMMLYQKNRKEWEKTVKD 244


>gb|ADN33800.1| RNA exonuclease [Cucumis melo subsp. melo]
          Length = 265

 Score =  273 bits (698), Expect(2) = 9e-77
 Identities = 145/212 (68%), Positives = 168/212 (79%), Gaps = 10/212 (4%)
 Frame = -1

Query: 929 LNPNWAQLLQKL----NTNSYTKRVPQ------TILGKRKARSIEEPIAPKPNPLLPTST 780
           LNPNWA L QKL    + +S    VP+      T+LGKRK RS  E    + N L+P + 
Sbjct: 14  LNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVND 73

Query: 779 DCSITNVLAMDCEMVGVGPLGNKNALGRVTLINKWGNVIYDEFVRPIEHVVNFRSEISGI 600
           D S+T+ +AMDCEMVGVG  GNK+ALGRVTL+NKWGNVIYDEFVRPIE VV+FR++ISGI
Sbjct: 74  DFSLTDEVAMDCEMVGVGQ-GNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGI 132

Query: 599 RSSDLRKAKNFNVVQKKVAELIKGRILVGHALHNDLKALLLSHPKNDIRDTSEYQPLLKE 420
           R  DL+KAK+F  VQK+VAELIKG+ILVGHAL NDLKALLLSHPKND+RDTSEYQ   KE
Sbjct: 133 RPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKE 192

Query: 419 GQRRGLRHLAAEILGVEIQNGEHCPVEDARAA 324
           G +R LRHLAAE LGV+IQNGEHCPVEDAR+A
Sbjct: 193 GCKRALRHLAAEFLGVQIQNGEHCPVEDARSA 224



 Score = 41.2 bits (95), Expect(2) = 9e-77
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -2

Query: 262 VEDARAAMVLYQKYRKQWEKSFK 194
           VEDAR+AM+LYQK RK+WEKS K
Sbjct: 218 VEDARSAMLLYQKKRKEWEKSVK 240


>ref|XP_004146040.1| PREDICTED: RNA exonuclease 4-like [Cucumis sativus]
           gi|449510336|ref|XP_004163636.1| PREDICTED: RNA
           exonuclease 4-like [Cucumis sativus]
          Length = 263

 Score =  272 bits (695), Expect(2) = 2e-76
 Identities = 142/210 (67%), Positives = 166/210 (79%), Gaps = 8/210 (3%)
 Frame = -1

Query: 929 LNPNWAQLLQKLNTNSY--------TKRVPQTILGKRKARSIEEPIAPKPNPLLPTSTDC 774
           LNPNWA L QKLN +          ++   +T+LGKRK RS  E    + N L+P + D 
Sbjct: 14  LNPNWALLQQKLNPHGSNHSNTVLKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDF 73

Query: 773 SITNVLAMDCEMVGVGPLGNKNALGRVTLINKWGNVIYDEFVRPIEHVVNFRSEISGIRS 594
           S+T+ +AMDCEMVGVG  GNK+ALGRVTL+NKWGNVIYDEFVRPIE VV+FR++ISGIR 
Sbjct: 74  SLTDEVAMDCEMVGVGQ-GNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRP 132

Query: 593 SDLRKAKNFNVVQKKVAELIKGRILVGHALHNDLKALLLSHPKNDIRDTSEYQPLLKEGQ 414
            DL+KAK+F  VQK+VAELIKG++LVGHAL NDLKALLLSHPKND+RDTSEYQ   KEG 
Sbjct: 133 CDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGC 192

Query: 413 RRGLRHLAAEILGVEIQNGEHCPVEDARAA 324
           +R LRHLAAE L VEIQNGEHCPVEDAR+A
Sbjct: 193 KRALRHLAAEFLSVEIQNGEHCPVEDARSA 222



 Score = 41.2 bits (95), Expect(2) = 2e-76
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -2

Query: 262 VEDARAAMVLYQKYRKQWEKSFK 194
           VEDAR+AM+LYQK RK+WEKS K
Sbjct: 216 VEDARSAMLLYQKKRKEWEKSVK 238


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