BLASTX nr result

ID: Lithospermum22_contig00014692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014692
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298678.1| serine hydroxymethyltransferase 1 [Populus t...   332   2e-89
gb|ABO61376.1| serine hydroxymethyltransferase [Populus tremuloi...   331   5e-89
ref|XP_002328910.1| serine hydroxymethyltransferase 6 [Populus t...   330   9e-89
gb|ABK94226.1| unknown [Populus trichocarpa]                          330   9e-89
gb|ABO61381.1| serine hydroxymethyltransferase [Populus tremuloi...   328   4e-88

>ref|XP_002298678.1| serine hydroxymethyltransferase 1 [Populus trichocarpa]
           gi|118481215|gb|ABK92558.1| unknown [Populus
           trichocarpa] gi|222845936|gb|EEE83483.1| serine
           hydroxymethyltransferase 1 [Populus trichocarpa]
          Length = 471

 Score =  332 bits (851), Expect = 2e-89
 Identities = 161/180 (89%), Positives = 165/180 (91%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNQETGYIDYDKLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN ++GYIDYDKLEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQSGYIDYDKLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYKKFREVADKIGAYLLCDMAHISGLVAAQEAADPFEYCDIVTTTTHKSL 362
           CGGSAYPRDWDYKKFR VADK GA LLCDMAHISGLVAAQEAA+PFEYCDIVTTTTHKSL
Sbjct: 187 CGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTTTTHKSL 246

Query: 363 RGPRAGMIFYRXXXXXXXXXXXEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQV 542
           RGPRAGMIFYR           E+AVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQV
Sbjct: 247 RGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQV 306


>gb|ABO61376.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 471

 Score =  331 bits (848), Expect = 5e-89
 Identities = 159/180 (88%), Positives = 165/180 (91%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNQETGYIDYDKLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN +TGYIDYD+LEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGYIDYDRLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYKKFREVADKIGAYLLCDMAHISGLVAAQEAADPFEYCDIVTTTTHKSL 362
           CGGSAYPRDWDYK+FR VADK GA LLCDMAHISGLVAAQEAA+PFEYCDIVTTTTHKSL
Sbjct: 187 CGGSAYPRDWDYKRFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTTTTHKSL 246

Query: 363 RGPRAGMIFYRXXXXXXXXXXXEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQV 542
           RGPRAGMIFYR           E+AVYDFEDK+NFAVFPSLQGGPHNHQIGALAVALKQV
Sbjct: 247 RGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKVNFAVFPSLQGGPHNHQIGALAVALKQV 306


>ref|XP_002328910.1| serine hydroxymethyltransferase 6 [Populus trichocarpa]
           gi|222839340|gb|EEE77677.1| serine
           hydroxymethyltransferase 6 [Populus trichocarpa]
          Length = 471

 Score =  330 bits (846), Expect = 9e-89
 Identities = 159/179 (88%), Positives = 164/179 (91%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNQETGYIDYDKLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN +TG++DYD+LEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNPQTGFLDYDRLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYKKFREVADKIGAYLLCDMAHISGLVAAQEAADPFEYCDIVTTTTHKSL 362
           CGGSAYPRDWDYKKFR VADK GA LLCDMAHISGLVAAQEAA+PFEYCDIVTTTTHKSL
Sbjct: 187 CGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTTTTHKSL 246

Query: 363 RGPRAGMIFYRXXXXXXXXXXXEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 539
           RGPRAGMIFYR           EDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ
Sbjct: 247 RGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305


>gb|ABK94226.1| unknown [Populus trichocarpa]
          Length = 471

 Score =  330 bits (846), Expect = 9e-89
 Identities = 159/179 (88%), Positives = 164/179 (91%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNQETGYIDYDKLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN +TG++DYD+LEEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNPQTGFLDYDRLEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYKKFREVADKIGAYLLCDMAHISGLVAAQEAADPFEYCDIVTTTTHKSL 362
           CGGSAYPRDWDYKKFR VADK GA LLCDMAHISGLVAAQEAA+PFEYCDIVTTTTHKSL
Sbjct: 187 CGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTTTTHKSL 246

Query: 363 RGPRAGMIFYRXXXXXXXXXXXEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 539
           RGPRAGMIFYR           EDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ
Sbjct: 247 RGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305


>gb|ABO61381.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 471

 Score =  328 bits (840), Expect = 4e-88
 Identities = 158/179 (88%), Positives = 163/179 (91%)
 Frame = +3

Query: 3   LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNQETGYIDYDKLEEKALDFRPKLII 182
           LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN +TG++DYD+ EEKALDFRPKLII
Sbjct: 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNPQTGFLDYDRWEEKALDFRPKLII 186

Query: 183 CGGSAYPRDWDYKKFREVADKIGAYLLCDMAHISGLVAAQEAADPFEYCDIVTTTTHKSL 362
           CGGSAYPRDWDYKKFR VADK GA LLCDMAHISGLVAAQEAA+PFEYCDIVTTTTHKSL
Sbjct: 187 CGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTTTTHKSL 246

Query: 363 RGPRAGMIFYRXXXXXXXXXXXEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 539
           RGPRAGMIFYR           EDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ
Sbjct: 247 RGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305


Top