BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014628
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   605   e-170
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              605   e-170
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   593   e-167
ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]              584   e-164

>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  605 bits (1560), Expect = e-170
 Identities = 311/386 (80%), Positives = 337/386 (87%)
 Frame = +2

Query: 149  HNGPRLKPKLSVRSELNGKINGALSTESDPRFLDRQKALEAAMSDINNSFGKGSVTRLGS 328
            H G + + ++ +R E   K+NGALS++ DPRFLDRQKALEAAM+DIN+SFGKGSVTRLGS
Sbjct: 31   HMGAK-RQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGS 89

Query: 329  AGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAML 508
            AGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAML
Sbjct: 90   AGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAML 149

Query: 509  VDAEHAFDPSYSKAVGVDVENLIVCQPDTGEMALEIADRMCRSGAVDLICIDSVSALTPR 688
            VDAEHAFDP+YSKA+GVDVENLIVCQPD GEMALEIADRMCRSGA+DLIC+DSVSALTPR
Sbjct: 150  VDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPR 209

Query: 689  AEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGG 868
            AEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGG
Sbjct: 210  AEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGG 269

Query: 869  IALKFFASVRLEIRSIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEITFGEGVSK 1048
            IALKFFAS+RLEIR IGKIKS KGDEDIGL             PYKQAEFEI FGEGVSK
Sbjct: 270  IALKFFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSK 329

Query: 1049 LGCILDCAELMGVVQKKGSWYSYEDHRLGQGREKAMQYLRENLPLSEEIEKIVRSMAVDG 1228
            LGCILDCAELM VV KKGSWYSY D+RLGQGR++A+QYLREN  +  EIEKIVR M  +G
Sbjct: 330  LGCILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEG 389

Query: 1229 GGLVGASVIKYSTPEHPDEDTLLEMQ 1306
             G +GA  ++ S     DED L E++
Sbjct: 390  IGQLGAPHVRLSPTSPEDEDILEEIR 415


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  605 bits (1559), Expect = e-170
 Identities = 309/380 (81%), Positives = 334/380 (87%)
 Frame = +2

Query: 167  KPKLSVRSELNGKINGALSTESDPRFLDRQKALEAAMSDINNSFGKGSVTRLGSAGGALV 346
            + ++ +R E   K+NGALS++ DPRFLDRQKALEAAM+DIN+SFGKGSVTRLGSAGGALV
Sbjct: 5    RQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALV 64

Query: 347  ETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 526
            ETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA
Sbjct: 65   ETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 124

Query: 527  FDPSYSKAVGVDVENLIVCQPDTGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGE 706
            FDP+YSKA+GVDVENLIVCQPD GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGE
Sbjct: 125  FDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGE 184

Query: 707  IGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 886
            IGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF
Sbjct: 185  IGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 244

Query: 887  ASVRLEIRSIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEITFGEGVSKLGCILD 1066
            AS+RLEIR IGKIKS KGDEDIGL             PYKQAEFEI FGEGVSKLGCILD
Sbjct: 245  ASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILD 304

Query: 1067 CAELMGVVQKKGSWYSYEDHRLGQGREKAMQYLRENLPLSEEIEKIVRSMAVDGGGLVGA 1246
            CAELM VV KKGSWYSY D+RLGQGR++A+QYLREN  +  EIEKIVR M  +G G +GA
Sbjct: 305  CAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGA 364

Query: 1247 SVIKYSTPEHPDEDTLLEMQ 1306
              ++ S     DED L E++
Sbjct: 365  PHVRLSPTSPEDEDILEEIR 384


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  593 bits (1529), Expect = e-167
 Identities = 308/419 (73%), Positives = 340/419 (81%), Gaps = 12/419 (2%)
 Frame = +2

Query: 80   MDLLCPLKSPILSTNDCVLVKFSHNGPRLKP------------KLSVRSELNGKINGALS 223
            MDL+ PLK        CV++K   +   L P              +++ EL G+ NGALS
Sbjct: 1    MDLMFPLKP------HCVILKAPLSSSLLFPFPLRFRAVTAFKHANIQCELEGRPNGALS 54

Query: 224  TESDPRFLDRQKALEAAMSDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLP 403
             + DPRF+DRQKALEAAM+DINN+FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP
Sbjct: 55   GDFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLP 114

Query: 404  KGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAVGVDVENLIVC 583
            KGRI+EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKA+GVDVENLIVC
Sbjct: 115  KGRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVC 174

Query: 584  QPDTGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRK 763
            QPD GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRK
Sbjct: 175  QPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 234

Query: 764  MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSIGKIKSVKGD 943
            MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLE+R  GKIKS KGD
Sbjct: 235  MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAKGD 294

Query: 944  EDIGLXXXXXXXXXXXXXPYKQAEFEITFGEGVSKLGCILDCAELMGVVQKKGSWYSYED 1123
            E+IGL             PYK AEFEI FGEG+SKLGCILDCAE+  +V KKGSWYSY D
Sbjct: 295  EEIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGD 354

Query: 1124 HRLGQGREKAMQYLRENLPLSEEIEKIVRSMAVDGGGLVGASVIKYSTPEHPDEDTLLE 1300
            HRLGQGR+KA+QYL+EN  L EEIEK+VRS  +DG        +K S+  H D+D   E
Sbjct: 355  HRLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEE 413


>ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|222875295|gb|EEF12426.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  587 bits (1513), Expect = e-165
 Identities = 301/367 (82%), Positives = 322/367 (87%), Gaps = 1/367 (0%)
 Frame = +2

Query: 131  VLVKFSHNGPRLKPKLSVRSELNGKINGA-LSTESDPRFLDRQKALEAAMSDINNSFGKG 307
            V  K SH     K    +R E + K+NG+ LS++ D RFLD+QKALEAAM+DINNSFGKG
Sbjct: 14   VCFKTSHFAAVKKKPKEIRCEFDSKVNGSPLSSDLDARFLDKQKALEAAMNDINNSFGKG 73

Query: 308  SVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQK 487
            SVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQK
Sbjct: 74   SVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQK 133

Query: 488  LGGNAMLVDAEHAFDPSYSKAVGVDVENLIVCQPDTGEMALEIADRMCRSGAVDLICIDS 667
             GG+AMLVDAEHAFDP+YSKA+GVDVENLIVCQPD GEMALEIADRMCRSGAVDLIC+DS
Sbjct: 134  FGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDS 193

Query: 668  VSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGN 847
            VSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGN
Sbjct: 194  VSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGN 253

Query: 848  PEVTSGGIALKFFASVRLEIRSIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIT 1027
            PEVTSGGIALKFFASVRLEIRS GKIKSVKGDED+G+             PYKQAEFEI 
Sbjct: 254  PEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEII 313

Query: 1028 FGEGVSKLGCILDCAELMGVVQKKGSWYSYEDHRLGQGREKAMQYLRENLPLSEEIEKIV 1207
            FGEGVS+LGCILDCAE+M VV KKGSWYSY DHRLGQGR+KA+QYLR+N  L EEIEK V
Sbjct: 314  FGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDHRLGQGRDKALQYLRDNPHLQEEIEKKV 373

Query: 1208 RSMAVDG 1228
            RS   DG
Sbjct: 374  RSTMTDG 380


>gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]
          Length = 438

 Score =  584 bits (1506), Expect = e-164
 Identities = 304/380 (80%), Positives = 327/380 (86%), Gaps = 5/380 (1%)
 Frame = +2

Query: 182  VRSELNGKINGALSTESDPRFLDRQKALEAAMSDINNSFGKGSVTRLGSAGGALVETFPS 361
            + SE + +INGALS ++D RFLDRQKALEAAM+DIN+SFGKGSVTRLGSAGGALVETF S
Sbjct: 59   ISSEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSS 118

Query: 362  GCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSY 541
            G LTLD ALGGGLPKGR+VEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+Y
Sbjct: 119  GILTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAY 178

Query: 542  SKAVGVDVENLIVCQPDTGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQ 721
            SKA+GVDVENLIVCQPD GEMALE ADRMCRSGAVDLIC+DSVSALTPRAEIEGEIGMQQ
Sbjct: 179  SKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQ 238

Query: 722  MGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRL 901
            MGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRL
Sbjct: 239  MGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRL 298

Query: 902  EIRSIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEITFGEGVSKLGCILDCAELM 1081
            EIRS GKIKS KGDEDIGL             PYKQAEFEI FGEGVSKLGC+LDCAE+M
Sbjct: 299  EIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIM 358

Query: 1082 GVVQKKGSWYSYEDHRLGQGREKAMQYLRENLPLSEEIEKIVRSMAVDG-----GGLVGA 1246
             VV KKGSWYSYED RLGQGREKA+Q+LREN  L +EIEK VR + +DG       L+ +
Sbjct: 359  EVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSS 418

Query: 1247 SVIKYSTPEHPDEDTLLEMQ 1306
            S    S  E  +ED+L + Q
Sbjct: 419  SSSSASHREEEEEDSLDDFQ 438