BLASTX nr result

ID: Lithospermum22_contig00014570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014570
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   140   1e-31
ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cu...   135   4e-30
ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cu...   135   4e-30
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...   134   1e-29
ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Gl...   126   2e-27

>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/104 (68%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
 Frame = +3

Query: 3   AGDSVVFLRAENGDLCVGIRRAKRGFGGGPETSSGWNPAGGNCVVPYGGFSAFLRED--- 173
           +GDS+VFLRAENGDLCVGIRRAKRG GGG E+SSGWNP GGNC VPYGGFSAFLRED   
Sbjct: 201 SGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVPYGGFSAFLREDENK 260

Query: 174 XXXXXXXXXXXXXXXXXXPGRVKPESVLEAATLAENGQPFEVVY 305
                              G+V PESV EAATLA NGQPFEVVY
Sbjct: 261 LMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVY 304


>ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/102 (65%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   AGDSVVFLRAENGDLCVGIRRAKRGFGGGPETSSGWNPAGGNCVVPYGGFSAFLRE-DXX 179
           AGDS+VFLRAENGDLCVGIRRAKRG G GPE+S GWNPAGGNC V YG FSAFLRE D  
Sbjct: 200 AGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLREDDNR 259

Query: 180 XXXXXXXXXXXXXXXXPGRVKPESVLEAATLAENGQPFEVVY 305
                            G+VKPESV EAA LA NGQPFE+++
Sbjct: 260 LTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIF 301


>ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/102 (65%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   AGDSVVFLRAENGDLCVGIRRAKRGFGGGPETSSGWNPAGGNCVVPYGGFSAFLRE-DXX 179
           AGDS+VFLRAENGDLCVGIRRAKRG G GPE+S GWNPAGGNC V YG FSAFLRE D  
Sbjct: 200 AGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLREDDNR 259

Query: 180 XXXXXXXXXXXXXXXXPGRVKPESVLEAATLAENGQPFEVVY 305
                            G+VKPESV EAA LA NGQPFE+++
Sbjct: 260 LTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIF 301


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3   AGDSVVFLRAENGDLCVGIRRAKRGFGGGPETSSGWNPAGGNCVVPYGGFSAFLRED--X 176
           AGDS+VFLRAENGDLC+GIRRAKRG GGGPE+S  WNPAGGNCV+PYGGF++F RED   
Sbjct: 204 AGDSIVFLRAENGDLCIGIRRAKRGVGGGPESS--WNPAGGNCVMPYGGFNSFFREDGNK 261

Query: 177 XXXXXXXXXXXXXXXXXPGRVKPESVLEAATLAENGQPFEVVY 305
                             G+VK ESV+EAATLA NGQPFEVVY
Sbjct: 262 LSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVY 304


>ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/104 (61%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
 Frame = +3

Query: 3   AGDSVVFLRAENGDLCVGIRRAKRGFGGGPETSSGWNPAGGNCVVPYGGFSAFLRED--- 173
           AGDS+VFLRAENGDLCVGIRRAK+G GGG ETSSGWNPAGGN  +PY GFS FLRED   
Sbjct: 197 AGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGFSPFLREDDNR 256

Query: 174 XXXXXXXXXXXXXXXXXXPGRVKPESVLEAATLAENGQPFEVVY 305
                              G+V+PE+++EAA LA N +PFEVVY
Sbjct: 257 ILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVY 300


Top