BLASTX nr result

ID: Lithospermum22_contig00014563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014563
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330570.1| high mobility group family [Populus trichoca...   136   2e-30
ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   134   6e-30
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   134   1e-29
gb|AFK40606.1| unknown [Medicago truncatula]                          121   5e-26
ref|XP_003598285.1| AT-rich interactive domain-containing protei...   121   5e-26

>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/95 (63%), Positives = 77/95 (81%)
 Frame = +2

Query: 119 KPYPKAEINYQEIAQNPDLFWEKVRSFHQYFGTKFKVPIIGGKPVDLHHLFVEVTSRGGI 298
           + YP A   Y++IAQ+ DLFWEK+++FHQ FGTKF VP +GGK +DLHHLFVEVTSRGGI
Sbjct: 29  RSYPPATAKYEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGI 88

Query: 299 EKVVGDRRWREVTATFKFPSSLTSGTYSLRKCYLS 403
           EKV+ DR+W+EV   F FP+++TS ++ LRK YLS
Sbjct: 89  EKVITDRKWKEVITAFNFPTTITSASFVLRKHYLS 123


>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  134 bits (338), Expect = 6e-30
 Identities = 58/95 (61%), Positives = 76/95 (80%)
 Frame = +2

Query: 119 KPYPKAEINYQEIAQNPDLFWEKVRSFHQYFGTKFKVPIIGGKPVDLHHLFVEVTSRGGI 298
           +PYP+A   YQE+ Q+ DLFW+ ++ FH+ FGTKF VP  GGK +DLH LFVEVTSRGG+
Sbjct: 38  RPYPEAAAQYQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALDLHRLFVEVTSRGGL 97

Query: 299 EKVVGDRRWREVTATFKFPSSLTSGTYSLRKCYLS 403
           EKV+ DR+W+EVT  FKFP+++TS ++ LRK YLS
Sbjct: 98  EKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLS 132


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/95 (61%), Positives = 76/95 (80%)
 Frame = +2

Query: 119 KPYPKAEINYQEIAQNPDLFWEKVRSFHQYFGTKFKVPIIGGKPVDLHHLFVEVTSRGGI 298
           + YP     ++++ Q+ DLFWEK++SFH+ FGTKF VP +GGK +DLHHLFVEVTSRGG+
Sbjct: 28  RSYPSPTAQFEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGL 87

Query: 299 EKVVGDRRWREVTATFKFPSSLTSGTYSLRKCYLS 403
           EKVV DR+W+EV A F FPS++TS ++ LRK YLS
Sbjct: 88  EKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLS 122


>gb|AFK40606.1| unknown [Medicago truncatula]
          Length = 234

 Score =  121 bits (304), Expect = 5e-26
 Identities = 53/96 (55%), Positives = 73/96 (76%)
 Frame = +2

Query: 116 SKPYPKAEINYQEIAQNPDLFWEKVRSFHQYFGTKFKVPIIGGKPVDLHHLFVEVTSRGG 295
           + PYP     Y ++ ++ +LF +K++SFH   GTK K+P IGGKP+DLHHLFVEVTSRGG
Sbjct: 26  TNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSLGTKLKIPTIGGKPLDLHHLFVEVTSRGG 85

Query: 296 IEKVVGDRRWREVTATFKFPSSLTSGTYSLRKCYLS 403
           IEKV+ DR+W+EV  +F F  ++TSG++ +RK YLS
Sbjct: 86  IEKVIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLS 121


>ref|XP_003598285.1| AT-rich interactive domain-containing protein [Medicago truncatula]
           gi|355487333|gb|AES68536.1| AT-rich interactive
           domain-containing protein [Medicago truncatula]
          Length = 274

 Score =  121 bits (304), Expect = 5e-26
 Identities = 53/96 (55%), Positives = 73/96 (76%)
 Frame = +2

Query: 116 SKPYPKAEINYQEIAQNPDLFWEKVRSFHQYFGTKFKVPIIGGKPVDLHHLFVEVTSRGG 295
           + PYP     Y ++ ++ +LF +K++SFH   GTK K+P IGGKP+DLHHLFVEVTSRGG
Sbjct: 26  TNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSLGTKLKIPTIGGKPLDLHHLFVEVTSRGG 85

Query: 296 IEKVVGDRRWREVTATFKFPSSLTSGTYSLRKCYLS 403
           IEKV+ DR+W+EV  +F F  ++TSG++ +RK YLS
Sbjct: 86  IEKVIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLS 121


Top