BLASTX nr result
ID: Lithospermum22_contig00014557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00014557
(1685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201386.1| F-box protein [Arabidopsis thaliana] gi|7517065... 102 3e-19
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-19
ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arab... 96 3e-17
ref|NP_199833.1| putative F-box protein [Arabidopsis thaliana] g... 93 2e-16
ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana] g... 93 2e-16
>ref|NP_201386.1| F-box protein [Arabidopsis thaliana]
gi|75170652|sp|Q9FHP3.1|FB300_ARATH RecName: Full=F-box
protein At5g65850 gi|9759569|dbj|BAB11132.1| unnamed
protein product [Arabidopsis thaliana]
gi|50253490|gb|AAT71947.1| At5g65850 [Arabidopsis
thaliana] gi|51972136|gb|AAU15172.1| At5g65850
[Arabidopsis thaliana] gi|332010731|gb|AED98114.1| F-box
protein [Arabidopsis thaliana]
Length = 392
Score = 102 bits (254), Expect = 3e-19
Identities = 110/418 (26%), Positives = 178/418 (42%), Gaps = 18/418 (4%)
Frame = +2
Query: 128 PSKEAATQVIPIDVIFDILVRVPVKSLVRFKCVSKAWLSLILSALFATTFNTRVLKNPSD 307
P+K + IP+D+I +IL+R+P KS+ +CVSK W+S+I F F TR L P
Sbjct: 26 PNKTEKSVQIPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSLHRPQ- 84
Query: 308 RYSLLVIAKDKSTSQRHF----LSAPYQSGSTTQLLTLPNIPSEKTEVDILNGLVLFHPQ 475
L+ K + F L PY++ S ++L N +NGL+ F +
Sbjct: 85 ----LLFCCKKDGNLFFFSSPQLQNPYENSSA---ISLKNFSLCYKISRPVNGLICFKRK 137
Query: 476 NGYLKHNFAFIINPNTHEVMKLLGKAAQPRFSYGNVHICYFFGFDPSTRGFKVLNTRIIG 655
+ I NP+T + L P+ ++ FF ++P + FKVL +
Sbjct: 138 E--MNETVTVICNPSTGHTLSL------PKPMKTSIGPSRFFVYEPIQKQFKVL----LS 185
Query: 656 LRTPKKRKIECGLFDLSSCSWKRINPVFPFDIMGDDWLYWLRDNVCIDGVIY----XXXX 823
++ + + + G +L SW+ I P I+G +CI+GV+Y
Sbjct: 186 YKSDEHQVLTLGTGEL---SWRIIECSMP-HILG-------MSEICINGVLYYPAINLSS 234
Query: 824 XXXXXXXXXXREESFSLIPFPQGAIPTDIVTNYDHEGRPGICFNYPYMINYNGLLAFICI 1003
R E F I + I H+G +INYNG LA +
Sbjct: 235 GDYIIVCFDVRSEKFRFITVMEEFIKA------AHDGT---------LINYNGKLASLVS 279
Query: 1004 EKI----HHHKTVEIWILEDPKNQEWVKETIILP---ENCGGSGSQRPRNAIFTGEIMFT 1162
E+ K++E+W+L+D + +EW K T +LP ++ G+ + R T EIM +
Sbjct: 280 ERYCFVDGRSKSIELWVLQDAEKKEWSKHTYVLPAWWQHRIGTLNLRFVGVTRTNEIMLS 339
Query: 1163 PKMISKECMQ-IPF--YDMNKRCFRVIEISMPSWMASDDMEVSCFGGYVENIMRLRGM 1327
P C Q +PF Y N ++ +++ A V + +VEN+ L M
Sbjct: 340 P------CYQTVPFDVYYFNIERKTMMSVAIQGMEAFQGHLVFTYLDHVENVKLLHNM 391
>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
predicted protein [Populus trichocarpa]
Length = 433
Score = 102 bits (253), Expect = 4e-19
Identities = 98/344 (28%), Positives = 152/344 (44%), Gaps = 29/344 (8%)
Frame = +2
Query: 155 IPIDVIFDILVRVPVKSLVRFKCVSKAWLSLILSALFATTFNTRVLKNPSDRYSLLVIAK 334
IP DVI DIL R+P KS+VRF+CVS+ W S FA+ + R L + +LL+
Sbjct: 26 IPDDVILDILTRLPAKSVVRFRCVSRTWCSFTHDPFFASLHHARSLTRDNGS-ALLLSYP 84
Query: 335 DKSTSQRHFLSAPYQSGSTTQLLTLPNIPSEKTEV-DILNGLVLFHPQNGYLKHNFAFII 511
D S+S F + G L + ++ + T + +I+ G++ + Y + + I
Sbjct: 85 DPSSSSTSFSFFERKQGFRN--LQISHVDQQYTHLSEIIRGILCIN----YRRSHRVDIC 138
Query: 512 NPNTHEVMKLLGKAAQPRFSYGNVHI------CYFFGFDPSTRGFKVLN----TRI---- 649
N T E + L P S V Y FGF+ STR +KVLN TR
Sbjct: 139 NITTQETITLPRSTNIPIRSDAGVDFDIVYEPRYSFGFNSSTRDYKVLNICSITRYKLQV 198
Query: 650 -----IGLRTPKKRKIECGLF----DLSSCSWKRINPVFPFDIMGDDWLYWLR-DNVCID 799
+ R +R +E +F D + SW++I+P +P+ D L+ L ++VC D
Sbjct: 199 NPNNGLSTREVSQRTVEFEIFTIGCDRGAGSWRKIDPGYPY----DQELHGLSCESVCAD 254
Query: 800 GVIY--XXXXXXXXXXXXXXREESFSLIPFPQGAIPTDIVTNYDHEGRPGICFNYPYMIN 973
GVI+ ++E F +I P+ A+ + M
Sbjct: 255 GVIHWRHRFFDQEILLAFDLKQEKFQIIQVPKEAL------------------EFHLMKQ 296
Query: 974 YNGLLAFI--CIEKIHHHKTVEIWILEDPKNQEWVKETIILPEN 1099
G L + I + +K V +WILED NQ W+KE ++ P +
Sbjct: 297 VKGCLVLMGHVISGYNRNKIV-LWILEDRLNQIWMKENVVFPSH 339
>ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arabidopsis lyrata subsp.
lyrata] gi|297319926|gb|EFH50348.1| hypothetical protein
ARALYDRAFT_910273 [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 95.9 bits (237), Expect = 3e-17
Identities = 103/412 (25%), Positives = 165/412 (40%), Gaps = 23/412 (5%)
Frame = +2
Query: 143 ATQVIPIDVIFDILVRVPVKSLVRFKCVSKAWLSLILSALFATTFNTRVLKNPSDRYSLL 322
+T IP+D+ +IL R+P KSL+RF+ VSK W S+I S F +F TR P L
Sbjct: 18 STPNIPLDLTLEILSRLPAKSLIRFQAVSKFWFSIIRSKDFVDSFLTRSKTRP----RFL 73
Query: 323 VIAKDKSTSQRHFLSAPYQSGSTTQLLTLPNIPSEKTEVDILNGLVLFHPQNGYL---KH 493
+ K+ + +R SAP + + + + + P NG++ +
Sbjct: 74 LTFKNFDSRKRFIFSAPEHQKNDKSSTVFARHDMTISADRVYH--IRCRPVNGFVCCTRG 131
Query: 494 NFAFIINPNTHEVMKLLGKAAQPRFSYGNVHICYFFGFDPSTRGFKVLNTRIIGLRTPKK 673
+ + NP T +++KL P H+ G+DP +KVL + K
Sbjct: 132 DSIAVCNPTTRQIVKL------PDVESNGRHVYARLGYDPVEDQYKVLCVMFYDPYSAKC 185
Query: 674 RK----IECGLFDLSS--CSWKRINPVFPFDIMGDDWLYWLRDNVCIDGVIYXXXXXXXX 835
++ E +F L S W++I D +CIDG IY
Sbjct: 186 KRQGTQPEPYVFTLQSQQKEWRKIEITQGVAYRSVD------GGICIDGAIY-FGDGRSR 238
Query: 836 XXXXXXREESFSLIPFPQGAIPTDIVTNYDHEGRPGICFNYPYMINYNGLLAFICIEKIH 1015
R E+ LI P+ ++ T+ + ++NYNG L + +
Sbjct: 239 IVRFDVRSETLELIQAPENSLITETSDS--------------ALLNYNGKLGGV---DYN 281
Query: 1016 HHKTVEIWILEDPKNQEWVKETIILPENCGG--SGSQRPRNAIFTGE-IMFTPKMISKEC 1186
+ + +WILED + QEW + P TGE IM ++IS E
Sbjct: 282 YTRETILWILEDAEKQEWSELRFARPSEWDDLLEDYFTSEGESHTGELIMVDSRLISSEP 341
Query: 1187 MQIPFYDMNKRCFRVIEISMPSWMASDDM-----------EVSCFGGYVENI 1309
+ +YD ++ R +E+ +A D+ E+ F GYVENI
Sbjct: 342 FSVCYYDFHRESLRRVEV---QGIADDEFRRVHGIGKRTREILGFPGYVENI 390
>ref|NP_199833.1| putative F-box protein [Arabidopsis thaliana]
gi|75262452|sp|Q9FGS3.1|FB287_ARATH RecName:
Full=Putative F-box protein At5g50220
gi|9759024|dbj|BAB09393.1| unnamed protein product
[Arabidopsis thaliana] gi|332008530|gb|AED95913.1|
putative F-box protein [Arabidopsis thaliana]
Length = 357
Score = 93.2 bits (230), Expect = 2e-16
Identities = 113/427 (26%), Positives = 181/427 (42%), Gaps = 17/427 (3%)
Frame = +2
Query: 89 KSTDECVEGINQLPSKE--------AATQVIPIDVIFDILVRVPVKSLVRFKCVSKAWLS 244
+ ++E E + LP+K A IPID++ +IL ++P KSL++F+CVSK W S
Sbjct: 3 RGSEEIKEETSPLPAKHFQRREVSIAEDIGIPIDLMVEILKKLPAKSLIKFQCVSKQWSS 62
Query: 245 LILSAL-FATTFNTRVLKNPSDRYSLLVIAKDKSTSQRHFLSAPYQSGSTTQLLTLPNIP 421
+I S+ F + TR L PS R L+ + + S + Q S+ L TL +
Sbjct: 63 IIGSSRDFIDSIVTRSLSQPS-RDILISFSTTLTNSLK-------QISSSFPLRTLDILT 114
Query: 422 SEKTEVDILNGLVLFHPQNGYLKHNFAFIINPNTHEVMKLLGKAAQPRFSYGNVHI-CYF 598
++ + A I NP T + + L P + G+ H+ F
Sbjct: 115 KNQSYTE-------------------AAIYNPTTRQSLSL------PETTAGHSHVSTSF 149
Query: 599 FGFDPSTRGFKVLNTRIIGLRTPKKRKIECGLFDLSSC--SWKRINPVFPFDIMGDDWLY 772
G+DP +KV I L K+R C +F L W++I F LY
Sbjct: 150 LGYDPFKNQYKV-----ICLDNYKRRC--CHVFTLGDAIRKWRKIQYNF--------GLY 194
Query: 773 W-LRDNVCIDGVIYXXXXXXXXXXXXXXREESFSLIPFPQGAIPTDIVT-NYDHEGRPGI 946
+ L VCI G IY ++ L+ F D+++ +D P
Sbjct: 195 FPLLPPVCIKGTIYYQAKQYG---------STYVLLCF-------DVISEKFDQVEAPKT 238
Query: 947 CFNYPY-MINYNGLLAFICIEKIHHHKTVEIWILE-DPKNQEWVKETIILPENCGGSGSQ 1120
++ Y +INY G L F+C + VEIW+++ D K QEW K I G
Sbjct: 239 MMDHRYTLINYQGKLGFMCCQ-----NRVEIWVMKNDEKKQEWSK---IFFYEMAGFEKW 290
Query: 1121 RPRNAIFTGEIMFTPK-MISKECMQIPFYDMNKRCFRVIEISMPSWMASDDMEVSCFGGY 1297
A +GEI+F + ++S + + + +Y + R +E+ + + + +
Sbjct: 291 HIARATPSGEIVFVNRLLLSCQTLYVYYYGPKRNSMRRVEVEGTKYRRKHLVHICPVPDH 350
Query: 1298 VENIMRL 1318
VEN MRL
Sbjct: 351 VENTMRL 357
>ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana]
gi|75263267|sp|Q9FZF8.1|FB44_ARATH RecName: Full=Putative
F-box protein At1g47790
gi|9802587|gb|AAF99789.1|AC012463_6 T2E6.11 [Arabidopsis
thaliana] gi|332194093|gb|AEE32214.1| putative F-box
protein [Arabidopsis thaliana]
Length = 389
Score = 92.8 bits (229), Expect = 2e-16
Identities = 99/387 (25%), Positives = 159/387 (41%), Gaps = 21/387 (5%)
Frame = +2
Query: 146 TQVIPIDVIFDILVRVPVKSLVRFKCVSKAWLSLILSALFATTFNTRVLKNPSDRYSLLV 325
T P+D+ +IL+R+PVKS+VRF+CVSK W S+I F T+ T+ S R SLL
Sbjct: 22 TSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQ----SSTRQSLLF 77
Query: 326 IAKDKSTSQRHFLSAP---YQSGSTTQL------LTLPNIPSEKTEVDILNGLVLFHPQN 478
K + + S P Y S S++Q + LP S + + ++GL+ FH
Sbjct: 78 CF--KQSDKLFVFSIPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLA 135
Query: 479 GYLKHNFAFIINPNTHEVMKLLGKAAQPRFSYGNVHICYFFGFDPSTRGFKVLNTRIIGL 658
+ + NP+ + + L +PR S+ + + F G+DP KV +
Sbjct: 136 TVI------VWNPSMRQFLTL----PKPRKSWKELTV--FLGYDPIEGKHKV-------V 176
Query: 659 RTPKKRKI-ECGLFDLSSC--SWKRINPVFPFDIMGDDWLYWLRDNVCIDGVI----YXX 817
P+ R EC + L S SW+ + D W CI GV+ Y
Sbjct: 177 CLPRNRTCDECQVLTLGSAQKSWRTVKTKHKHRSTNDTW------GRCIKGVVYYIAYVY 230
Query: 818 XXXXXXXXXXXXREESFSLIPFPQGAIPTDIVTNYDHEGRPGICFNYPYMINYNGLLAFI 997
+ E F +I P I D+ MINY G LA
Sbjct: 231 HTRVWCIMSFHVKSEKFDMIKLPLENIYRDV------------------MINYEGRLA-- 270
Query: 998 CIEKIH--HHKTVEIWILEDPKNQEWVKETII---LPENCGGSGSQRPRNAIFTGEIMFT 1162
C++K++ ++ + +WILED + +W + + + + + + GE ++
Sbjct: 271 CVDKLYTLNNDGIRLWILEDAEKHKWSSKQFLARYVHNDLRTNTISKLTGVTHAGEFVYI 330
Query: 1163 PKMISKECMQIPFYDMNKRCFRVIEIS 1243
K + F D K FR +E +
Sbjct: 331 STQYLKSF--VLFCDPKKNRFRKVEFN 355