BLASTX nr result

ID: Lithospermum22_contig00014514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014514
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|1...   191   7e-47
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   191   9e-47
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   191   1e-46
gb|AFK42989.1| unknown [Lotus japonicus]                              189   3e-46

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  192 bits (489), Expect = 3e-47
 Identities = 94/97 (96%), Positives = 97/97 (100%)
 Frame = -1

Query: 573 KMKLVRFLMKLNNETVSIELKNGTIVHGTVTGVDVSMNTHLKTVKLTLKGKNPVTLDHLS 394
           KMKLVRFLMKLNNETVSIELKNGT+VHGT+TGVD+SMNTHLKTVKLTLKGKNPVTLDHLS
Sbjct: 30  KMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLS 89

Query: 393 VRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 283
           VRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 90  VRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 126


>ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|118482633|gb|ABK93236.1|
           unknown [Populus trichocarpa]
           gi|118488779|gb|ABK96200.1| unknown [Populus
           trichocarpa] gi|222843847|gb|EEE81394.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score =  191 bits (486), Expect = 7e-47
 Identities = 93/98 (94%), Positives = 98/98 (100%)
 Frame = -1

Query: 570 MKLVRFLMKLNNETVSIELKNGTIVHGTVTGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 391
           MKLVRFLMKLNNETVSIELKNGT+VHGT+TGVD+SMNTHLKTVKLT+KGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSV 60

Query: 390 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAV 277
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRA+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAL 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  191 bits (485), Expect = 9e-47
 Identities = 94/96 (97%), Positives = 96/96 (100%)
 Frame = -1

Query: 570 MKLVRFLMKLNNETVSIELKNGTIVHGTVTGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 391
           MKLVRFLMKLNNETVSIELKNGTIVHGT+TGVD+SMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 390 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 283
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/96 (96%), Positives = 96/96 (100%)
 Frame = -1

Query: 570 MKLVRFLMKLNNETVSIELKNGTIVHGTVTGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 391
           MKLVRFLMKLNNETVSIELKNGT+VHGT+TGVD+SMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 390 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 283
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score =  189 bits (480), Expect = 3e-46
 Identities = 93/95 (97%), Positives = 95/95 (100%)
 Frame = -1

Query: 570 MKLVRFLMKLNNETVSIELKNGTIVHGTVTGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 391
           MKLVRFLMKLNNETVSIELKNGTIVHGT+TGVD+SMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 390 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 286
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 95


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