BLASTX nr result

ID: Lithospermum22_contig00014372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014372
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233966.1| TCP transcription factor 13 [Solanum lycoper...    86   5e-15
ref|NP_001233806.1| TCP transcription factor 12 [Solanum lycoper...    85   6e-15
ref|XP_002327254.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002526804.1| transcription factor, putative [Ricinus comm...    62   8e-08

>ref|NP_001233966.1| TCP transcription factor 13 [Solanum lycopersicum]
           gi|306416837|gb|ADM87262.1| TCP transcription factor 13
           [Solanum lycopersicum]
          Length = 325

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 51/98 (52%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = +3

Query: 96  MPRVGGFEFPGGGRFSPVQLGSMVXXXXXXXXXXXXVTETTNMGMFASLNNAYGGGG--G 269
           M R+GGFE PGGGRFSPVQLGSM                 TNMGM AS+ NAY      G
Sbjct: 233 MQRIGGFELPGGGRFSPVQLGSMFLQQPQPVQQLGLGVTETNMGMLASM-NAYNSSSSRG 291

Query: 270 SRVDLGMNLEXXXXXXXXXXXXXPQGSDSGDENKNDTQ 383
           S +DLGMNLE             PQGSDSGDEN  D+Q
Sbjct: 292 SGIDLGMNLE-----QHHHHQNQPQGSDSGDENHKDSQ 324


>ref|NP_001233806.1| TCP transcription factor 12 [Solanum lycopersicum]
           gi|306416835|gb|ADM87261.1| TCP transcription factor 12
           [Solanum lycopersicum]
          Length = 374

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 58/129 (44%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   FWMLPXXXXXXXXXXXXQHDQA--QPWQYKAPGMPRVGGFEFPGGGRFSPVQLGSMVXXX 176
           FWMLP               Q+  Q WQYK+    R+GG EFPGGGRFSPVQLGSMV   
Sbjct: 263 FWMLPVSGGTGSTAVSVGAGQSDHQLWQYKSS---RIGGLEFPGGGRFSPVQLGSMVLQQ 319

Query: 177 XXXXXXXXXVTETTNMGMFASLNNAYGGGGGSRVDLGMNLEXXXXXXXXXXXXXPQGSDS 356
                        +NMGM  + NN       SRVDLGMNLE              Q SDS
Sbjct: 320 SHPVQQLG-----SNMGMLNAYNN---NNNNSRVDLGMNLEHHNQTQH-------QDSDS 364

Query: 357 GDENKNDTQ 383
           GDEN ND+Q
Sbjct: 365 GDENHNDSQ 373


>ref|XP_002327254.1| predicted protein [Populus trichocarpa] gi|222835624|gb|EEE74059.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 50/130 (38%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
 Frame = +3

Query: 3   FWMLPXXXXXXXXXXXXQHDQAQPWQYKAPGMPRVGGFEFPGGGR--FSPVQLGSMVXXX 176
           FWMLP            Q  Q   +   A G+P +    F GGG    SPVQLGSM+   
Sbjct: 232 FWMLPVGGGATPTSSV-QEPQMWTFPAAAAGVPSMQRVNFGGGGGRVSSPVQLGSMIVQQ 290

Query: 177 XXXXXXXXXV-TETTNMGMFASLNNAYGGGGGSRVDLGMNLEXXXXXXXXXXXXXPQGSD 353
                    +    +NMGM     N Y     SRV LGMNLE             PQGSD
Sbjct: 291 QVGANQQLGLGISESNMGMILGGVNPYSS---SRVGLGMNLEHHNQDNQ------PQGSD 341

Query: 354 SGDENKNDTQ 383
           SGDEN ND+Q
Sbjct: 342 SGDENPNDSQ 351


>ref|XP_002526804.1| transcription factor, putative [Ricinus communis]
           gi|223533808|gb|EEF35539.1| transcription factor,
           putative [Ricinus communis]
          Length = 444

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 48/129 (37%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   FWMLPXXXXXXXXXXXXQHDQAQPWQYKAPGMPRVGGFEFPGGGRFSPVQLGSMVXXXXX 182
           FWMLP            +    Q W + A G+  +    F GGGR SPVQLGSM+     
Sbjct: 330 FWMLPVGGGTATTAAVPE---PQMWTFPAAGVTSMQRVNFSGGGRLSPVQLGSMIVQQQV 386

Query: 183 XXXXXXXV-TETTNMGMFASLNNAYGGGGGSRVDLGMNLEXXXXXXXXXXXXXPQGSDSG 359
                  +    +NMG+  S+ NAY     SRV LGMNLE              QGSDSG
Sbjct: 387 GGGQQLGLGVAESNMGLLGSV-NAY----NSRVGLGMNLE------QHNQESHQQGSDSG 435

Query: 360 -DENKNDTQ 383
            D+N  D+Q
Sbjct: 436 DDQNPTDSQ 444


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