BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014358
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   344   3e-92
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   328   2e-87
ref|XP_002526239.1| DNA binding protein, putative [Ricinus commu...   316   8e-84
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   310   5e-82
ref|XP_002308125.1| methyl binding domain protein [Populus trich...   303   1e-79

>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  344 bits (883), Expect = 3e-92
 Identities = 176/262 (67%), Positives = 198/262 (75%), Gaps = 10/262 (3%)
 Frame = +1

Query: 313  NANQNPIDVESSEGERDQ--SPQQDDQH-HENANNQIVLYDGPVCGG--EIVPVPDPEQT 477
            +A Q PID+ SSE E +   + + DD H +EN +NQ+V+YD PV     E+ PVPDP Q 
Sbjct: 28   DALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSNQLVVYD-PVANSATEVEPVPDPIQY 86

Query: 478  LLPP---RFSTRFPDRILPAVGAFTIQCANCFKWRLIPTKEKYEQIREHILENPFYCETA 648
             LP      +T  P R+LP+VGAFT+QCANCFKWRLIPTKEKYE+IREHILE PF CETA
Sbjct: 87   RLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEEIREHILEQPFVCETA 146

Query: 649  REWRPEISCDDPTDISQDGSRLWAIDKPNIALPPPGWQRLLRIRAEGGTKFADVYYQAPS 828
            REWRP +SCDDP DISQDGSRLWAIDKPNIA PP GWQRLLRIR EG TKFADVYY APS
Sbjct: 147  REWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRGEGSTKFADVYYVAPS 206

Query: 829  GKRFRSMVEVEKYLSENPRYVEEGVRLSQFSFQIPRPLQENYVRKRPAR--PALLHDGNG 1002
            GKR RSMVEV+KYL E+P Y+  GV LSQFSFQIP+PLQENYVRKRPAR       D   
Sbjct: 207  GKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRKRPARVNAGSYDDTTS 266

Query: 1003 SGASGFAEPSEVNPIAWVGPDE 1068
            SG S   EP EVNP++W GP E
Sbjct: 267  SGMSRPLEPGEVNPLSWAGPAE 288


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  328 bits (841), Expect = 2e-87
 Identities = 165/258 (63%), Positives = 194/258 (75%), Gaps = 6/258 (2%)
 Frame = +1

Query: 322  QNPIDVESSEGE--RDQSPQQDDQHHENANNQIVLYDGPVCG--GEIVPVPDPEQTLLPP 489
            Q PI+V SS  E   D +   DDQ  E+++ Q+VLYD P+    GEI PVP P  +  P 
Sbjct: 33   QEPIEVSSSSNEDNSDDTWDIDDQSIEDSSKQLVLYD-PLANDAGEIEPVPQPILSHHPF 91

Query: 490  R--FSTRFPDRILPAVGAFTIQCANCFKWRLIPTKEKYEQIREHILENPFYCETAREWRP 663
            R       P R+LP+VGAFT+QCA CFKWRLIPTK+KYE++REHILE PF+CETAREWRP
Sbjct: 92   RRYSDLNVPSRVLPSVGAFTVQCAKCFKWRLIPTKQKYEELREHILEEPFFCETAREWRP 151

Query: 664  EISCDDPTDISQDGSRLWAIDKPNIALPPPGWQRLLRIRAEGGTKFADVYYQAPSGKRFR 843
            +ISCDDPTDI QDGSRLWAIDKPNIA PPPGWQRLLRIR EG TKFADVYYQAPSGKR R
Sbjct: 152  DISCDDPTDIDQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYQAPSGKRLR 211

Query: 844  SMVEVEKYLSENPRYVEEGVRLSQFSFQIPRPLQENYVRKRPARPALLHDGNGSGASGFA 1023
            SMVE++KYL E+P Y+ +G+ L+QFSFQIP+PLQENYVRK+  RP L        ++   
Sbjct: 212  SMVEIQKYLIEHPEYMRDGITLTQFSFQIPKPLQENYVRKK--RPRL--------SASCL 261

Query: 1024 EPSEVNPIAWVGPDEDTE 1077
            EP E NP+ WVGP + TE
Sbjct: 262  EPGEANPLKWVGPGDCTE 279


>ref|XP_002526239.1| DNA binding protein, putative [Ricinus communis]
           gi|223534433|gb|EEF36136.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 271

 Score =  316 bits (810), Expect = 8e-84
 Identities = 165/257 (64%), Positives = 192/257 (74%), Gaps = 8/257 (3%)
 Frame = +1

Query: 229 SSEADKTNGIKEEPTNINISSTVSNDPENANQNPIDVESSEGERDQSPQQD--DQHHENA 402
           S   + +  IK+E  + + SS  ++   +  Q+P++V SS  E +    +D  +Q  ENA
Sbjct: 3   SPPGEASLSIKKEAIDYSSSSFAAH---SNLQSPVEVSSSSEEDNSHETEDANEQSTENA 59

Query: 403 NNQIVLYDGPVCG-GEIVPVPDPEQTLLPPRFSTRFP-----DRILPAVGAFTIQCANCF 564
           + QIVLYD    G G+I  VP P Q    P  S R P      R+LP+VGAFT+QCA CF
Sbjct: 60  SKQIVLYDPVANGSGQIEIVPQPLQCR--PHPSARRPGFLMHSRVLPSVGAFTVQCAKCF 117

Query: 565 KWRLIPTKEKYEQIREHILENPFYCETAREWRPEISCDDPTDISQDGSRLWAIDKPNIAL 744
           KWRLIPTKEKYE+IREHILE PFYCETAREWRP+ISC+DP DISQDGSRLWAIDKPNIA 
Sbjct: 118 KWRLIPTKEKYEEIREHILEQPFYCETAREWRPDISCNDPADISQDGSRLWAIDKPNIAQ 177

Query: 745 PPPGWQRLLRIRAEGGTKFADVYYQAPSGKRFRSMVEVEKYLSENPRYVEEGVRLSQFSF 924
           PP GWQRLLRIR EG +KFADVYYQAPSGKR RSMVE+E+YL  NP YV+ GV+LSQFSF
Sbjct: 178 PPRGWQRLLRIRGEGSSKFADVYYQAPSGKRLRSMVEIERYLMANPEYVQNGVKLSQFSF 237

Query: 925 QIPRPLQENYVRKRPAR 975
           QIPRPLQENYVRKRPAR
Sbjct: 238 QIPRPLQENYVRKRPAR 254


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  310 bits (795), Expect = 5e-82
 Identities = 161/274 (58%), Positives = 195/274 (71%), Gaps = 5/274 (1%)
 Frame = +1

Query: 289  STVSNDPENANQNPIDVESSEGERDQSPQQDDQHHENANNQIVLYDGPVCGGE--IVPVP 462
            S++++   ++  +PIDV SS  + +  P  D       +NQ+VLYD PV  G   I   P
Sbjct: 20   SSLTSYKHSSLLDPIDVSSSSDDENDLPNDD------VSNQLVLYD-PVANGNNAIELAP 72

Query: 463  DP---EQTLLPPRFSTRFPDRILPAVGAFTIQCANCFKWRLIPTKEKYEQIREHILENPF 633
            DP   E  LLP    +    R+LP+VGAFT+QCA+CFKWRLIPTKEKYE+IREHILE PF
Sbjct: 73   DPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYEEIREHILEQPF 132

Query: 634  YCETAREWRPEISCDDPTDISQDGSRLWAIDKPNIALPPPGWQRLLRIRAEGGTKFADVY 813
             C+ AREWRP +SCDDP DISQDGSR+WAIDKPNIA PP GW+RLLRIRAEG +KFAD+Y
Sbjct: 133  VCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRIRAEGSSKFADIY 192

Query: 814  YQAPSGKRFRSMVEVEKYLSENPRYVEEGVRLSQFSFQIPRPLQENYVRKRPARPALLHD 993
            Y APSGKR RSMVE++K+L E+P Y  +GV LSQFSFQIPRPLQENYVRKRPAR    ++
Sbjct: 193  YIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYVRKRPARLTSSYE 252

Query: 994  GNGSGASGFAEPSEVNPIAWVGPDEDTEFHDRKL 1095
                  S   E  +V+P+AWV P    E H R+L
Sbjct: 253  -----VSEPVEHEQVSPLAWVDP----EGHGRRL 277


>ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
           gi|222854101|gb|EEE91648.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 328

 Score =  303 bits (775), Expect = 1e-79
 Identities = 151/225 (67%), Positives = 175/225 (77%), Gaps = 4/225 (1%)
 Frame = +1

Query: 322 QNPIDVESS-EGERDQSPQQDDQHHENANNQIVLYDGPVCG-GEIVPVPDPEQTLLPPR- 492
           Q PI+V SS E     +   DD   E+++ Q+VLYD    G G+I PVP P Q   P R 
Sbjct: 33  QEPIEVSSSNEDNSHDTGDIDDPSIEDSSKQLVLYDPVTNGAGQIEPVPQPIQFQRPFRR 92

Query: 493 -FSTRFPDRILPAVGAFTIQCANCFKWRLIPTKEKYEQIREHILENPFYCETAREWRPEI 669
                 P R+LP+VG FT+QCA CFKWRLIPTK+KYE++REHILE PF+CETAR WRP+I
Sbjct: 93  YSDPNVPSRVLPSVGTFTVQCAKCFKWRLIPTKKKYEELREHILEEPFFCETARGWRPDI 152

Query: 670 SCDDPTDISQDGSRLWAIDKPNIALPPPGWQRLLRIRAEGGTKFADVYYQAPSGKRFRSM 849
           SCDDPTDI+QDGSRLWAIDKPNIA PPPGWQRLLRIR EG +KFADVYYQ+PSGKR RSM
Sbjct: 153 SCDDPTDITQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSM 212

Query: 850 VEVEKYLSENPRYVEEGVRLSQFSFQIPRPLQENYVRKRPARPAL 984
           VEV+KYL E+P Y+  GV LSQFSFQIP+PLQENYVRKR  RP++
Sbjct: 213 VEVQKYLIEHPEYMTYGVTLSQFSFQIPKPLQENYVRKR--RPSI 255