BLASTX nr result

ID: Lithospermum22_contig00014289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014289
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525395.1| conserved hypothetical protein [Ricinus comm...    77   3e-12
ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...    72   7e-11
emb|CAN74182.1| hypothetical protein VITISV_034260 [Vitis vinifera]    72   9e-11
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...    72   1e-10

>ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
           gi|223535358|gb|EEF37033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 561

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = -1

Query: 644 ESGKALMLDEINLGPDELLAEVEQFASASQATVHSYPALILPSKVGLSGSSEHF-DDEAP 468
           ES KA++LD+I+LGPD+LL +VE+F   SQAT HSYPA+IL S+ G + +   F DD   
Sbjct: 452 ESSKAILLDQIDLGPDDLLRKVEEFECISQATEHSYPAVILSSEDGANNTVAAFGDDSLS 511

Query: 467 WXXXXXXXXXXXXXXXXXXXXXXXSFEEVASAVPFGALPVDFIATEM 327
                                   SFEEV +AVP G+LPVD +A  +
Sbjct: 512 GSFTEEDDTYTDDEYEDDEYYDSDSFEEVDTAVPLGSLPVDRLAERL 558


>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/106 (40%), Positives = 61/106 (57%)
 Frame = -1

Query: 644 ESGKALMLDEINLGPDELLAEVEQFASASQATVHSYPALILPSKVGLSGSSEHFDDEAPW 465
           ES KA++LDEI+LGPD LL +VE+F   SQAT HSYPAL++ S+ G S S   F+D++  
Sbjct: 403 ESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYPALVMSSEDGSSNSISTFEDDS-- 460

Query: 464 XXXXXXXXXXXXXXXXXXXXXXXSFEEVASAVPFGALPVDFIATEM 327
                                  SFEE+ ++ P G+L +D IA ++
Sbjct: 461 ---HSENFSEDDMYSDDEYYDSESFEELETSAPPGSLSIDLIAEKL 503


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 42/106 (39%), Positives = 56/106 (52%)
 Frame = -1

Query: 644 ESGKALMLDEINLGPDELLAEVEQFASASQATVHSYPALILPSKVGLSGSSEHFDDEAPW 465
           ES KAL+LDE  LGPD LL  VE+F   SQAT HSYPAL++ S+ G  G+   ++    +
Sbjct: 456 ESSKALLLDETGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEYEG---Y 512

Query: 464 XXXXXXXXXXXXXXXXXXXXXXXSFEEVASAVPFGALPVDFIATEM 327
                                  S EE+ S VP G+LPVD +A ++
Sbjct: 513 NSEDYSEDEMYNDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 558


>emb|CAN74182.1| hypothetical protein VITISV_034260 [Vitis vinifera]
          Length = 306

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 44/106 (41%), Positives = 56/106 (52%)
 Frame = -1

Query: 644 ESGKALMLDEINLGPDELLAEVEQFASASQATVHSYPALILPSKVGLSGSSEHFDDEAPW 465
           ES KAL+LDEI LGPD LL  VE+F   SQAT HSYPAL++ S+ G  G+    + E   
Sbjct: 200 ESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKA--EXEGYN 257

Query: 464 XXXXXXXXXXXXXXXXXXXXXXXSFEEVASAVPFGALPVDFIATEM 327
                                  S EE+ S VP G+LPVD +A ++
Sbjct: 258 SEDYSEDEMYNDDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 303


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Vitis vinifera]
          Length = 560

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/106 (41%), Positives = 55/106 (51%)
 Frame = -1

Query: 644 ESGKALMLDEINLGPDELLAEVEQFASASQATVHSYPALILPSKVGLSGSSEHFDDEAPW 465
           ES KAL+LDEI LGPD LL  VE+F   SQAT HSYPAL++ S+ G  G+      E   
Sbjct: 456 ESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKA----EHEG 511

Query: 464 XXXXXXXXXXXXXXXXXXXXXXXSFEEVASAVPFGALPVDFIATEM 327
                                  S EE+ S VP G+LPVD +A ++
Sbjct: 512 YNSEDYSEDEMYNDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQL 557


Top