BLASTX nr result

ID: Lithospermum22_contig00014204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014204
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511974.1| DNA binding protein, putative [Ricinus commu...    75   6e-12
emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid c...    70   1e-10
gb|AFK46047.1| unknown [Lotus japonicus]                               65   6e-09
emb|CBI15416.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245...    65   6e-09

>ref|XP_002511974.1| DNA binding protein, putative [Ricinus communis]
           gi|223549154|gb|EEF50643.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 297

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/68 (57%), Positives = 43/68 (63%)
 Frame = -3

Query: 206 HDITSVNDGEVAAHQAPITGQQSTNPXXXXXXXXXXAMKHRNSPAMHGAGMYGGQAVGHP 27
           HDITSVN+GEV++HQAPITGQQ              A+KHR    M   GMYG   VGHP
Sbjct: 194 HDITSVNNGEVSSHQAPITGQQGNTNPAAGAPAMGSAVKHRAQHHMPSIGMYGA-PVGHP 252

Query: 26  VTAPPGHM 3
           V APPGHM
Sbjct: 253 VAAPPGHM 260


>emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 302

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
 Frame = -3

Query: 206 HDITSVNDG-EVAAHQAPITGQQSTNPXXXXXXXXXXAMKHR-NSPAMHGAGMYGGQAVG 33
           HDITSVN+G +V +HQAPITGQQS             ++KHR + P M G GMYG   +G
Sbjct: 194 HDITSVNNGGDVPSHQAPITGQQSNAYAPSAAAIGPPSVKHRPHQPHMAGLGMYGA-PMG 252

Query: 32  HPVTAPPGHM 3
           HPV+APPGHM
Sbjct: 253 HPVSAPPGHM 262


>gb|AFK46047.1| unknown [Lotus japonicus]
          Length = 309

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/72 (55%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
 Frame = -3

Query: 206 HDITSVNDGEVAAHQAPITGQQ-STNPXXXXXXXXXXAMKHRNSP--AMHGAGMYGGQAV 36
           HDITSVN+G+VA++QAPITGQ  ST P          ++KHR  P     G GMY G  V
Sbjct: 197 HDITSVNNGDVASNQAPITGQHGSTIPPSTMGVGVGHSLKHRVQPHHIPGGLGMY-GTPV 255

Query: 35  GHP-VTAPPGHM 3
           GHP V APPGHM
Sbjct: 256 GHPVVAAPPGHM 267


>emb|CBI15416.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = -3

Query: 206 HDITSVNDGEVAAHQAPITGQQST-NPXXXXXXXXXXAMK-HRNSPAMHGA--GMYGGQA 39
           HDITSVN+G+V+  QAPITGQQ   NP           +K HR  P+M     GMY G  
Sbjct: 148 HDITSVNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMY-GTP 206

Query: 38  VGHPVTAPPGHM 3
           +GHPV APPGHM
Sbjct: 207 MGHPVAAPPGHM 218


>ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245771 [Vitis vinifera]
          Length = 296

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = -3

Query: 206 HDITSVNDGEVAAHQAPITGQQST-NPXXXXXXXXXXAMK-HRNSPAMHGA--GMYGGQA 39
           HDITSVN+G+V+  QAPITGQQ   NP           +K HR  P+M     GMY G  
Sbjct: 192 HDITSVNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMY-GTP 250

Query: 38  VGHPVTAPPGHM 3
           +GHPV APPGHM
Sbjct: 251 MGHPVAAPPGHM 262


Top