BLASTX nr result

ID: Lithospermum22_contig00014153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014153
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV59393.1| GAGA-binding transcriptional activator [Solanum l...    70   3e-10
ref|XP_002334054.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>gb|ADV59393.1| GAGA-binding transcriptional activator [Solanum lycopersicum]
           gi|319718185|gb|ADV59394.1| GAGA-binding transcriptional
           activator [Solanum lycopersicum]
          Length = 311

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
 Frame = -1

Query: 408 MDGHGNENIKNWSFLETSPIPLKGHLGLQLMSSTVDDNPLMHGASGGSIXXXXXXXXXXX 229
           MDG+G  +I+NWS+ E +P   KGHLGLQ +SS  +  P                     
Sbjct: 1   MDGNGGMHIRNWSYFEPTPTVPKGHLGLQFVSSMNEKPPHFRNIHDN------------- 47

Query: 228 XXXXXXXXXXXXXHGYPALMTTPTNGGLFYQHLMGGIMESSVGMGYIRDPWIN--FCKEL 55
                          +P++M + TNGG F+ H + G+ ES + M Y+RD W+N    +E 
Sbjct: 48  ----HQQQQQSHQPDHPSVMAS-TNGGAFHHHRVCGLSESPMPMEYMRDSWVNQKDYREK 102

Query: 54  NLNLVSNNNQHHANYG 7
            LN++S N+ +   +G
Sbjct: 103 YLNVLSANHPYLPGFG 118


>ref|XP_002334054.1| predicted protein [Populus trichocarpa]
           gi|224125910|ref|XP_002329747.1| predicted protein
           [Populus trichocarpa] gi|222839564|gb|EEE77901.1|
           predicted protein [Populus trichocarpa]
           gi|222870655|gb|EEF07786.1| predicted protein [Populus
           trichocarpa] gi|319718095|gb|ADV59349.1| GAGA-binding
           transcriptional activator [Populus trichocarpa]
           gi|319718097|gb|ADV59350.1| GAGA-binding transcriptional
           activator [Populus trichocarpa]
          Length = 284

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 39/131 (29%), Positives = 64/131 (48%)
 Frame = -1

Query: 408 MDGHGNENIKNWSFLETSPIPLKGHLGLQLMSSTVDDNPLMHGASGGSIXXXXXXXXXXX 229
           MD   + NI+NW + E  P P+KG+LGLQLMS T+ + P++   S               
Sbjct: 1   MDEDNSLNIRNWGYYE--PTPVKGNLGLQLMSPTMPEKPILGSRS--------------- 43

Query: 228 XXXXXXXXXXXXXHGYPALMTTPTNGGLFYQHLMGGIMESSVGMGYIRDPWINFCKELNL 49
                           PA+MT+  N G +++ +  GI +  + M Y++D WI   ++L L
Sbjct: 44  ----------------PAIMTS-MNAGFYHRDI--GISQPLMPMEYVKDAWIGQREKL-L 83

Query: 48  NLVSNNNQHHA 16
           N++  N+ + A
Sbjct: 84  NVLPGNHDYAA 94


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