BLASTX nr result

ID: Lithospermum22_contig00014010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00014010
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003378060.1| histone H3 [Trichinella spiralis] gi|3169730...    66   2e-24
ref|XP_002809382.1| PREDICTED: histone H3.1t-like isoform 1 [Pon...    66   2e-23
ref|XP_004002474.1| PREDICTED: histone H3.2-like [Ovis aries]          66   2e-23
gb|EGV98928.1| Histone H3.1t [Cricetulus griseus]                      64   4e-23
ref|NP_001103112.1| uncharacterized protein LOC691496 [Rattus no...    64   4e-23

>ref|XP_003378060.1| histone H3 [Trichinella spiralis] gi|316973063|gb|EFV56695.1|
           histone H3 [Trichinella spiralis]
          Length = 154

 Score = 65.9 bits (159), Expect(3) = 2e-24
 Identities = 35/41 (85%), Positives = 35/41 (85%), Gaps = 6/41 (14%)
 Frame = +1

Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAP------KPHR 165
           MARTKQTARKSTGGKAPRKQLATKAARKSAP      KPHR
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHR 41



 Score = 55.8 bits (133), Expect(3) = 2e-24
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 210 ELLIRKLPFQRLVREITQDFKTDLRFQS 293
           ELLIRKLPFQRLVREI QDFKTDLRFQS
Sbjct: 78  ELLIRKLPFQRLVREIAQDFKTDLRFQS 105



 Score = 35.4 bits (80), Expect(3) = 2e-24
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 158 LIGTVALREIRKYQKSTRVI 217
           L+GTVALREIR+YQKST ++
Sbjct: 61  LVGTVALREIRRYQKSTELL 80


>ref|XP_002809382.1| PREDICTED: histone H3.1t-like isoform 1 [Pongo abelii]
          Length = 149

 Score = 65.9 bits (159), Expect(3) = 2e-23
 Identities = 35/42 (83%), Positives = 35/42 (83%), Gaps = 6/42 (14%)
 Frame = +1

Query: 58  LMARTKQTARKSTGGKAPRKQLATKAARKSAP------KPHR 165
           LMARTKQTARKSTGGKAPRKQLATK ARKSAP      KPHR
Sbjct: 13  LMARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHR 54



 Score = 55.8 bits (133), Expect(3) = 2e-23
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 210 ELLIRKLPFQRLVREITQDFKTDLRFQS 293
           ELLIRKLPFQRLVREI QDFKTDLRFQS
Sbjct: 73  ELLIRKLPFQRLVREIAQDFKTDLRFQS 100



 Score = 32.7 bits (73), Expect(3) = 2e-23
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 164 GTVALREIRKYQKSTRVI 217
           GTVALREIR+YQKST ++
Sbjct: 58  GTVALREIRRYQKSTELL 75


>ref|XP_004002474.1| PREDICTED: histone H3.2-like [Ovis aries]
          Length = 139

 Score = 65.9 bits (159), Expect(3) = 2e-23
 Identities = 35/41 (85%), Positives = 35/41 (85%), Gaps = 6/41 (14%)
 Frame = +1

Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAP------KPHR 165
           MARTKQTARKSTGGKAPRKQLATKAARKSAP      KPHR
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR 41



 Score = 57.0 bits (136), Expect(3) = 2e-23
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +3

Query: 201 NRQELLIRKLPFQRLVREITQDFKTDLRFQS 293
           N  ELLIRKLPFQRLVREI QDFKTDLRFQS
Sbjct: 60  NPPELLIRKLPFQRLVREIAQDFKTDLRFQS 90



 Score = 31.6 bits (70), Expect(3) = 2e-23
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 164 GTVALREIRKYQKST 208
           GTVALREIR+YQKST
Sbjct: 45  GTVALREIRRYQKST 59


>gb|EGV98928.1| Histone H3.1t [Cricetulus griseus]
          Length = 320

 Score = 64.3 bits (155), Expect(3) = 4e-23
 Identities = 34/41 (82%), Positives = 34/41 (82%), Gaps = 6/41 (14%)
 Frame = +1

Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAP------KPHR 165
           MARTKQTARKSTGGKAPRKQLATK ARKSAP      KPHR
Sbjct: 185 MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGLKKPHR 225



 Score = 55.8 bits (133), Expect(3) = 4e-23
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 210 ELLIRKLPFQRLVREITQDFKTDLRFQS 293
           ELLIRKLPFQRLVREI QDFKTDLRFQS
Sbjct: 244 ELLIRKLPFQRLVREIAQDFKTDLRFQS 271



 Score = 32.7 bits (73), Expect(3) = 4e-23
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 164 GTVALREIRKYQKSTRVI 217
           GTVALREIR+YQKST ++
Sbjct: 229 GTVALREIRRYQKSTELL 246


>ref|NP_001103112.1| uncharacterized protein LOC691496 [Rattus norvegicus]
           gi|148675749|gb|EDL07696.1| mCG140136 [Mus musculus]
           gi|149052754|gb|EDM04571.1| rCG33140 [Rattus norvegicus]
          Length = 136

 Score = 64.3 bits (155), Expect(3) = 4e-23
 Identities = 34/41 (82%), Positives = 34/41 (82%), Gaps = 6/41 (14%)
 Frame = +1

Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAP------KPHR 165
           MARTKQTARKSTGGKAPRKQLATK ARKSAP      KPHR
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHR 41



 Score = 55.8 bits (133), Expect(3) = 4e-23
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 210 ELLIRKLPFQRLVREITQDFKTDLRFQS 293
           ELLIRKLPFQRLVREI QDFKTDLRFQS
Sbjct: 60  ELLIRKLPFQRLVREIAQDFKTDLRFQS 87



 Score = 32.7 bits (73), Expect(3) = 4e-23
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +2

Query: 164 GTVALREIRKYQKSTRVI 217
           GTVALREIR+YQKST ++
Sbjct: 45  GTVALREIRRYQKSTELL 62


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