BLASTX nr result

ID: Lithospermum22_contig00013952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013952
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320393.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002516785.1| conserved hypothetical protein [Ricinus comm...    55   7e-06

>ref|XP_002320393.1| predicted protein [Populus trichocarpa] gi|222861166|gb|EEE98708.1|
           predicted protein [Populus trichocarpa]
          Length = 64

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -2

Query: 498 MAENPLSLRSSRFRLAQRCTKQLQQQRARLYIIWRCTMMLLSWQD 364
           MA + LS+RS + R  QRC+KQ+++QR RLYIIWRCT+MLL W D
Sbjct: 20  MAADALSMRSMKLRSWQRCSKQIREQRTRLYIIWRCTVMLLCWHD 64


>ref|XP_002516785.1| conserved hypothetical protein [Ricinus communis]
           gi|223543873|gb|EEF45399.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 66

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 22/38 (57%), Positives = 31/38 (81%)
 Frame = -2

Query: 477 LRSSRFRLAQRCTKQLQQQRARLYIIWRCTMMLLSWQD 364
           +R  +FR  QRC++ +++QR RLYIIWRCT++LLSW D
Sbjct: 9   IRFPKFRSWQRCSRLVKEQRTRLYIIWRCTVILLSWDD 46


Top