BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013942
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa...   113   2e-23
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]          112   4e-23
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B...   110   1e-22
gb|AFW64137.1| 60S ribosomal protein L39, partial [Zea mays]          110   1e-22
emb|CBI21094.3| unnamed protein product [Vitis vinifera]              110   1e-22

>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
          Length = 118

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/71 (78%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = +3

Query: 48  ILSFFSKLGFTQPS-PAAATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAK 224
           +L  F+ LGF +     AATMPSHK+F IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAK
Sbjct: 48  LLPPFTHLGFRRRLFVPAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAK 107

Query: 225 RRHWRRTKLGF 257
           RRHWRRTKLGF
Sbjct: 108 RRHWRRTKLGF 118


>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
          Length = 99

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/57 (89%), Positives = 52/57 (91%)
 Frame = +3

Query: 87  SPAAATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 257
           SP A  MPSHK+F IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 43  SPPAEAMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 99


>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
          Length = 97

 Score =  110 bits (276), Expect = 1e-22
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = +3

Query: 93  AAATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 257
           +AATMPSHK+F IK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 43  SAATMPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 97


>gb|AFW64137.1| 60S ribosomal protein L39, partial [Zea mays]
          Length = 77

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = +3

Query: 93  AAATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 257
           +AA MPSHK+F IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 23  SAAAMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 77


>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/77 (72%), Positives = 61/77 (79%), Gaps = 6/77 (7%)
 Frame = +3

Query: 45  YILSF--FSKLGFTQPSPAA----ATMPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNT 206
           + LSF  FS    + P  AA    A MPSHK+F+IKKKLAKK RQNRPIP+WIRMRTDNT
Sbjct: 36  WFLSFLGFSPTSLSSPDLAADLSTAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNT 95

Query: 207 IRYNAKRRHWRRTKLGF 257
           IRYNAKRRHWRRTKLGF
Sbjct: 96  IRYNAKRRHWRRTKLGF 112