BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013906
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312663.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-13
gb|ADU56213.1| gag-pol polyprotein [Solanum lycopersicum]              79   9e-13
gb|AAT39954.1| Putative integrase, identical [Solanum demissum]        73   4e-11
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...    69   7e-10
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...    69   7e-10

>ref|XP_002312663.1| predicted protein [Populus trichocarpa] gi|222852483|gb|EEE90030.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = +1

Query: 331 GRGQINAVTQQQALDTPRVVTGTLLLCDTETRVLFDSRATHSFISQSFADVLSLCRESLL 510
           G+ ++ A+TQQ A  +  VV+GTLL+C  E RVLFD+ ATHSF+S  FA  L   ++ +L
Sbjct: 418 GQARVFAITQQDAQTSNIVVSGTLLICSFEARVLFDTGATHSFVSSYFA--LRFTKQPIL 475

Query: 511 V--PLMIMTPVGRLVEVRYAYRDCPLSVNNQLLIVDLLPFELVDFDL 645
           +  PL +  P   ++   Y Y DC + V  + L+ DL+  E+V FD+
Sbjct: 476 LESPLCVAIPSDEVMFGEYVYVDCEVQVQGRNLLGDLVILEIVGFDV 522


>gb|ADU56213.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 329

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 53/151 (35%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
 Frame = +1

Query: 256 GHASMTYVSSLGCLYR*ERSNESGAGRGQINAVTQQ---------------------QAL 372
           GH    Y    G   R    +++G G GQ  A T Q                     +A 
Sbjct: 89  GHGRGRYSGGRGG--RGNGGHQNGRGDGQTGATTSQHGRGNEQTNERAHCYAFPGRSEAE 146

Query: 373 DTPRVVTGTLLLCDTETRVLFDSRATHSFISQSFADVLSLCRESLLVPLMIMTPVGRLVE 552
            +  V+TG LL+CD  T VLFD  +T S++S SFA+ L+L  E L +P+ + TPVG  V 
Sbjct: 147 TSDTVITGNLLVCDCMTSVLFDPGSTFSYVSSSFANGLNLHCELLDMPIRVSTPVGESVV 206

Query: 553 VRYAYRDCPLSVNNQLLIVDLLPFELVDFDL 645
           V   YR C ++       VDL+  E+VDFD+
Sbjct: 207 VEKVYRSCLVNFVGSNTYVDLVILEMVDFDV 237


>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
          Length = 1609

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
 Frame = +1

Query: 313 SNESGAGRGQ----INAVTQQQALDTPRVVTGTLLLCDTETRVLFDSRATHSFISQSFAD 480
           S E G GRG+      A T+ +A  +  V+T T+LLC      LFD  +T S++S  +A 
Sbjct: 548 SREYGVGRGRHIHFFAAPTRTEAEASDDVITCTILLCQKPALALFDPGSTFSYVSVYYAS 607

Query: 481 VLSLCRESLLVPLMIMTPVGRLVEVRYAYRDCPLSVNNQLLIVDLLPFELVDFDL 645
            LS+  E L+ PL + TPVG  + V   +R C +++  +    DL+  ++VDFD+
Sbjct: 608 RLSMMSEPLVAPLRVSTPVGESLVVDQVFRSCLVTIQGRDTWADLILLDMVDFDV 662


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +1

Query: 313 SNESGAGRGQINAVTQQQALD-TPRVVTGTLLLCDTETRVLFDSRATHSFISQSFADVLS 489
           ++ +G G  ++ A+T +   + +P VVT  + +       L D  A+ SF++   A+   
Sbjct: 444 TSSTGGGANRLYAITSRHEQENSPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFD 503

Query: 490 LCRESLLVPLMIMTPVGRLVEVRYAYRDCPLSVNNQLLIVDLLPFELVDFDL 645
           +  E L  P  + TPVG  +     YRDCP+S+N++  +VDL+  ++VDFD+
Sbjct: 504 VLPERLCEPFCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMVDFDV 555


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +1

Query: 313 SNESGAGRGQINAVTQQQALD-TPRVVTGTLLLCDTETRVLFDSRATHSFISQSFADVLS 489
           ++ +G G  ++ A+T +   + +P VVT  + +       L D  A+ SF++   A+   
Sbjct: 438 TSSTGGGANRLYAITSRHEQENSPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFD 497

Query: 490 LCRESLLVPLMIMTPVGRLVEVRYAYRDCPLSVNNQLLIVDLLPFELVDFDL 645
           +  E L  P  + TPVG  +     YRDCP+S+N++  +VDL+  ++VDFD+
Sbjct: 498 VLPERLCEPFCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMVDFDV 549