BLASTX nr result

ID: Lithospermum22_contig00013897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013897
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001030692.1| Ribosomal protein L34 [Arabidopsis thaliana]...   103   6e-20
ref|XP_002882857.1| structural constituent of ribosome [Arabidop...   103   7e-20
ref|XP_004141160.1| PREDICTED: uncharacterized protein LOC101210...    99   2e-18
emb|CAG23918.1| LIN1 protein [Cicer arietinum]                         99   2e-18
ref|XP_003529768.1| PREDICTED: uncharacterized protein LOC100809...    97   4e-18

>ref|NP_001030692.1| Ribosomal protein L34 [Arabidopsis thaliana]
           gi|29824329|gb|AAP04125.1| unknown protein [Arabidopsis
           thaliana] gi|110739249|dbj|BAF01538.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332641910|gb|AEE75431.1| Ribosomal protein L34
           [Arabidopsis thaliana]
          Length = 147

 Score =  103 bits (257), Expect = 6e-20
 Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
 Frame = -1

Query: 792 SSKTLIKSGLSLMTR-LTNPLKPHLNPTPSSSSDLRHLHRTQFTLFSPPPRSSDAIVVSH 616
           ++KTLI+SG SLM R LT P          +++ +++  R+ F   +P  +     +  +
Sbjct: 2   AAKTLIRSGASLMNRFLTKP----------TTNIVQNNLRSSFQYIAPQGQE----IPPY 47

Query: 615 LFPSLNH--TCLNTTDNDV--IPDVSKLGLLYPTGFXXXXXXXXXXXXXXXXXPIMLLPK 448
            FPSL++  + L +  ND   + ++++ G LYP+G                   ++L PK
Sbjct: 48  FFPSLSNLQSSLISRPNDTASLQELNERGFLYPSGLPSLEFFLPEVDPSSEP--LLLFPK 105

Query: 447 RTYQPSIIKRKRNHGFFARKATKGGKRVIARRIAKGRFRITA 322
           RT+QPS I+RKRNHGFFARKATKGG+RVIARRIAKGR R+TA
Sbjct: 106 RTFQPSTIRRKRNHGFFARKATKGGRRVIARRIAKGRHRVTA 147


>ref|XP_002882857.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297328697|gb|EFH59116.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 147

 Score =  103 bits (256), Expect = 7e-20
 Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 4/161 (2%)
 Frame = -1

Query: 792 SSKTLIKSGLSLMTRLTNPLKPHLNPTPSSSSDLRHLHRTQFTLFSPPPRSSDAIVVSHL 613
           ++KTLI+SG SLM R  +  KP  N   ++        R+ F   +P  +     +  + 
Sbjct: 2   AAKTLIRSGASLMNRFLS--KPTTNLVQNNL-------RSSFQQIAPQGQE----IPPYF 48

Query: 612 FPSLNH--TCLNTTDNDV--IPDVSKLGLLYPTGFXXXXXXXXXXXXXXXXXPIMLLPKR 445
           FPSL++  + L +  ND   + ++++ G LYP+G                   ++L PKR
Sbjct: 49  FPSLSNLQSSLISRPNDTASLQELNERGFLYPSGLPSLEFFLPEVDPSSEP--LLLFPKR 106

Query: 444 TYQPSIIKRKRNHGFFARKATKGGKRVIARRIAKGRFRITA 322
           T+QPS I+RKRNHGFFARKATKGG+RVIARRIAKGR R+TA
Sbjct: 107 TFQPSTIRRKRNHGFFARKATKGGRRVIARRIAKGRHRVTA 147


>ref|XP_004141160.1| PREDICTED: uncharacterized protein LOC101210601 [Cucumis sativus]
          Length = 147

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 67/161 (41%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
 Frame = -1

Query: 792 SSKTLIKSGLSLMTRLTNPLKPHLNPTPSSSSDLRHLHRTQFTLFSPPPRSSDAIVVSHL 613
           +SK LI++G SLM RL      H N     S  L H H  + T                L
Sbjct: 2   ASKLLIRTGSSLMNRLRLS-SAHQNNRIWGSQALSHGHGVEVTPM--------------L 46

Query: 612 FPSLN-HTC---LNTTDNDVIPDVSKLGLLYPTGFXXXXXXXXXXXXXXXXXPIMLLPKR 445
           FPS++ H     L   D + +  +   G+ +P G                  P++L PKR
Sbjct: 47  FPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKR 106

Query: 444 TYQPSIIKRKRNHGFFARKATKGGKRVIARRIAKGRFRITA 322
           T+QPS I+RKRNHGFFARKATKGG++VIARRIAKGR RITA
Sbjct: 107 TFQPSTIRRKRNHGFFARKATKGGRKVIARRIAKGRSRITA 147


>emb|CAG23918.1| LIN1 protein [Cicer arietinum]
          Length = 134

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
 Frame = -1

Query: 792 SSKTLIKSGLSLMTRLTNPLKPHLNPTPSSSSDLRHLHRTQFTLFSPPPRSSDAIVVSHL 613
           +SKTL+++G++L+ RL+           S+S  L + +  Q                 ++
Sbjct: 2   ASKTLLRNGVALLNRLSL----------SNSKSLLNSNNPQ----------------PYI 35

Query: 612 FPSLNHTCLNTTDNDVIPD---VSKLGLLYPTGFXXXXXXXXXXXXXXXXXPIMLLPKRT 442
           FPSL+    N   ND       +S  G LYP G                  P++L PKRT
Sbjct: 36  FPSLSKL-QNFPQNDAESAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRT 94

Query: 441 YQPSIIKRKRNHGFFARKATKGGKRVIARRIAKGRFRITA 322
           +QPS I+RKRNHGFFARKATKGG++VIARR+AKGRFRITA
Sbjct: 95  FQPSTIRRKRNHGFFARKATKGGRKVIARRVAKGRFRITA 134


>ref|XP_003529768.1| PREDICTED: uncharacterized protein LOC100809386 [Glycine max]
          Length = 131

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 64/155 (41%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
 Frame = -1

Query: 777 IKSGLS-LMTRLTNPLKPHLNPTPSSSSDLRHLHRTQFTLFSPPPRSSDAIVVSHLFPSL 601
           ++SG S L+ RL+  L  H N  P+  S L                         L PSL
Sbjct: 4   LRSGASSLLNRLSKSLLLHSNKNPNPQSQL-------------------------LLPSL 38

Query: 600 NHT--CLNTTDNDVIPDVSKLGLLYPTGFXXXXXXXXXXXXXXXXXPIMLLPKRTYQPSI 427
           +     ++  ++   P     G LYP G                  P++L PKRTYQPS+
Sbjct: 39  SRLPGAISPQNDAEFPHTQ--GFLYPCGLPSLRFFLPHGEAPSSDDPMLLFPKRTYQPSV 96

Query: 426 IKRKRNHGFFARKATKGGKRVIARRIAKGRFRITA 322
           I+RKRNHGFFARKATKGG+RVIARR+AKGRFRITA
Sbjct: 97  IRRKRNHGFFARKATKGGRRVIARRLAKGRFRITA 131


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