BLASTX nr result
ID: Lithospermum22_contig00013876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00013876
(903 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003601131.1| Rab5 GDP/GTP exchange factor [Medicago trunc... 144 4e-38
ref|XP_002285827.1| PREDICTED: vacuolar protein sorting-associat... 121 6e-36
ref|XP_003526606.1| PREDICTED: vacuolar protein sorting-associat... 125 4e-35
ref|XP_003522593.1| PREDICTED: vacuolar protein sorting-associat... 128 9e-35
ref|XP_002513841.1| Vacuolar protein sorting-associated protein ... 122 5e-34
>ref|XP_003601131.1| Rab5 GDP/GTP exchange factor [Medicago truncatula]
gi|355490179|gb|AES71382.1| Rab5 GDP/GTP exchange factor
[Medicago truncatula]
Length = 478
Score = 144 bits (363), Expect(3) = 4e-38
Identities = 80/147 (54%), Positives = 100/147 (68%)
Frame = +3
Query: 36 RQTRLVGETSYFFTNVLSAGSFILNIDAKAISLDETEFEQNMESARALLFGLSXXXXXXX 215
RQ+RLVGE SY+FTN+LSA SFI NIDA AIS+DETEFE+NME ARALL GLS
Sbjct: 215 RQSRLVGEASYYFTNMLSAESFISNIDANAISMDETEFERNMEFARALLSGLS-VDTQDP 273
Query: 216 XXXXXNLAETDMQKSMSPESSGAESRSDELQIRGRESLGKIPSASDLESKGATIIMKHED 395
N + D K+ SS A+ S ++ S+ K+PS SDLE+KGA +I+K +
Sbjct: 274 NSPYQNHVQHDKNKA---PSSDAKLESKKVTFASESSIAKVPSLSDLENKGACMIIKEDK 330
Query: 396 INQVFQEFPYFLSRAGDLTISDVEDLL 476
+N VF+EFPY + GDLT+SDVEDLL
Sbjct: 331 LNDVFREFPYMFASVGDLTVSDVEDLL 357
Score = 37.4 bits (85), Expect(3) = 4e-38
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 478 NYKQLVFRYICLSKGLGIPNPSPPRSKRPGESQHSCQTVEVSGAEK 615
NYK+LV +Y+CLSKGLG+ + S P Q++ Q V K
Sbjct: 359 NYKRLVSKYVCLSKGLGVSS----SSHHPSNPQNNAQQDHVETLSK 400
Score = 23.9 bits (50), Expect(3) = 4e-38
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 2 LHSNLLYVQR 31
LHSNLLY+QR
Sbjct: 203 LHSNLLYIQR 212
>ref|XP_002285827.1| PREDICTED: vacuolar protein sorting-associated protein 9A isoform 1
[Vitis vinifera]
Length = 463
Score = 121 bits (303), Expect(3) = 6e-36
Identities = 68/153 (44%), Positives = 96/153 (62%), Gaps = 6/153 (3%)
Frame = +3
Query: 36 RQTRLVGETSYFFTNVLSAGSFILNIDAKAISLDETEFEQNMESARALLFGLSXXXXXXX 215
RQ+R+V E +YFFTN+LSA SFI NI+A+++S+DE EFE NMESARALL GLS
Sbjct: 221 RQSRMVAEAAYFFTNMLSAESFISNINAESLSMDEREFEMNMESARALLSGLSSDLDGVL 280
Query: 216 XXXXXNLAETDMQKSMSPES-----SGAESRSDELQIRGRESL-GKIPSASDLESKGATI 377
+ +K S S S + +L+ ++ L K+PS SDLE+KGA +
Sbjct: 281 KEPQQKSLYSTKEKDPSIGSDLSLLSSEATSGAKLEPHAKDQLITKVPSISDLENKGAAM 340
Query: 378 IMKHEDINQVFQEFPYFLSRAGDLTISDVEDLL 476
++K + + F+E+PY + GDLT++DVEDLL
Sbjct: 341 LLKEDQASLAFREYPYLYANVGDLTVNDVEDLL 373
Score = 55.8 bits (133), Expect(3) = 6e-36
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +1
Query: 475 SNYKQLVFRYICLSKGLGIPNPSPPRSKRPGESQHSCQTVEVSGAEKTEDEINETLGD-- 648
++YKQLVF+++CLSKGLG+P P P S ++Q +T++ S + + + TL D
Sbjct: 374 NHYKQLVFKHVCLSKGLGVPAPPLPLSISQTQAQKHAETMKDSADTRAAEVKDNTLNDIG 433
Query: 649 ATNNL-NGLLPPDVEESEFKLERQQ 720
+TN++ N + +VE SE KL +++
Sbjct: 434 STNDVSNQVSLFEVETSESKLPQEE 458
Score = 21.2 bits (43), Expect(3) = 6e-36
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 2 LHSNLLYVQR 31
LHSNLLY+ R
Sbjct: 209 LHSNLLYILR 218
>ref|XP_003526606.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
[Glycine max]
Length = 467
Score = 125 bits (314), Expect(3) = 4e-35
Identities = 71/158 (44%), Positives = 98/158 (62%), Gaps = 12/158 (7%)
Frame = +3
Query: 39 QTRLVGETSYFFTNVLSAGSFILNIDAKAISLDETEFEQNMESARALLFGLSXXXXXXXX 218
Q+RLV E +Y+FTN+LSA SFI NIDAKAIS++E EF+ NME ARA+L G+S
Sbjct: 216 QSRLVAEAAYYFTNMLSAESFISNIDAKAISMEEAEFDGNMEFARAMLSGISADTQDPGS 275
Query: 219 XXXXN----LAETDMQKSMSPE--------SSGAESRSDELQIRGRESLGKIPSASDLES 362
+ AE K+++ SS A+S S ++ + K+PS SDLE+
Sbjct: 276 PYQNDGQHPRAEPTKHKALNDNNDPALRTPSSVAKSESKKVTFANESLITKVPSLSDLEN 335
Query: 363 KGATIIMKHEDINQVFQEFPYFLSRAGDLTISDVEDLL 476
KGA++I+K + +N+VF EFPY + GDL + DVEDLL
Sbjct: 336 KGASMILKEDKLNEVFGEFPYLFASVGDLMVGDVEDLL 373
Score = 46.2 bits (108), Expect(3) = 4e-35
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 475 SNYKQLVFRYICLSKGLGI-PNPSPPRSKRPGESQHSCQTVEVSGAEKTEDEINETLGDA 651
+NYKQLVF+Y+ LSKGLGI P PP + + H+ T++ S N L D
Sbjct: 374 NNYKQLVFKYVSLSKGLGISPTSLPPSNSQNNSEDHAETTIDSSD--------NGPLDDN 425
Query: 652 TNNLNGLLPPDVEESEFKLERQQV 723
+ + + D + LE Q++
Sbjct: 426 SKSEESIDTTDDSSDKVTLEEQKI 449
Score = 23.9 bits (50), Expect(3) = 4e-35
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 2 LHSNLLYVQR 31
LHSNLLY+QR
Sbjct: 203 LHSNLLYIQR 212
>ref|XP_003522593.1| PREDICTED: vacuolar protein sorting-associated protein 9A-like
[Glycine max]
Length = 465
Score = 128 bits (321), Expect(3) = 9e-35
Identities = 74/158 (46%), Positives = 96/158 (60%), Gaps = 12/158 (7%)
Frame = +3
Query: 39 QTRLVGETSYFFTNVLSAGSFILNIDAKAISLDETEFEQNMESARALLFGLSXXXXXXXX 218
Q+RLV E +Y+FTN+LSA SFI NIDAKAIS+DE EFE NME ARA+L G+S
Sbjct: 216 QSRLVAEAAYYFTNMLSAESFISNIDAKAISMDEAEFEGNMEFARAMLSGISADTQDPGS 275
Query: 219 XXXXN----LAETDMQK--------SMSPESSGAESRSDELQIRGRESLGKIPSASDLES 362
N AE K ++ SS +S S ++ + K+PS SDLE+
Sbjct: 276 PYQNNGHHTRAEPTKHKALIDHNDPALRTPSSVVKSESKKVTFADESLITKVPSLSDLEN 335
Query: 363 KGATIIMKHEDINQVFQEFPYFLSRAGDLTISDVEDLL 476
KGA++I+K + +N VF EFPY + GDLT+ DVEDLL
Sbjct: 336 KGASMILKEDKLNAVFGEFPYLFASVGDLTVGDVEDLL 373
Score = 42.4 bits (98), Expect(3) = 9e-35
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +1
Query: 475 SNYKQLVFRYICLSKGLGIPNPSPPRSKRPGESQHSCQTVEVSGAEKTEDEINETLGDAT 654
+NYKQLVF+Y+ LSKGLGI S P S S+ + G ++ +E D T
Sbjct: 374 NNYKQLVFKYVSLSKGLGISPTSLPPSNSQDNSEGHAEVDSSDGGPLDDNNKSEESIDTT 433
Query: 655 NN 660
+
Sbjct: 434 ED 435
Score = 23.9 bits (50), Expect(3) = 9e-35
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 2 LHSNLLYVQR 31
LHSNLLY+QR
Sbjct: 203 LHSNLLYIQR 212
>ref|XP_002513841.1| Vacuolar protein sorting-associated protein VPS9, putative [Ricinus
communis] gi|223546927|gb|EEF48424.1| Vacuolar protein
sorting-associated protein VPS9, putative [Ricinus
communis]
Length = 477
Score = 122 bits (306), Expect(3) = 5e-34
Identities = 75/169 (44%), Positives = 100/169 (59%), Gaps = 23/169 (13%)
Frame = +3
Query: 39 QTRLVGETSYFFTNVLSAGSFILNIDAKAISLDETEFEQNMESARALLFGLSXXXXXXXX 218
Q+RLVGE +YFFTN+LSA SFI NIDA ++S++E EFE+NMESARALL GLS
Sbjct: 216 QSRLVGEAAYFFTNMLSAVSFISNIDANSLSMEEAEFEKNMESARALLSGLS-----TDW 270
Query: 219 XXXXNLAETDMQKSMSPE----------------------SSGAESRSDELQIRGRES-L 329
N ++ + + PE SS A S S LQ ES +
Sbjct: 271 DSLSNQSDQSARNNFKPEVMESQPRAVDSKKARESLIGSKSSEARSGSKNLQYAKDESFM 330
Query: 330 GKIPSASDLESKGATIIMKHEDINQVFQEFPYFLSRAGDLTISDVEDLL 476
K+ S SD+E++GA +++K + + VF+E+PY + AGDLTI DVEDLL
Sbjct: 331 TKVSSLSDIENRGAVMLLKEDLASSVFREYPYLFAHAGDLTIHDVEDLL 379
Score = 47.4 bits (111), Expect(3) = 5e-34
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +1
Query: 478 NYKQLVFRYICLSKGLGIPNPSPPRSKRPGESQHSCQTV----EVSGAEKTEDEINETLG 645
NYKQLVF+Y+CLSKGLG PS S QH+ +T+ E E ++ +T
Sbjct: 381 NYKQLVFKYVCLSKGLGGTTPSLRLSNSQTHFQHATETIKEHLETRSVEANDESQKQT-- 438
Query: 646 DATNNLNGLLPPDVEES-EFKLERQQVPTRDELGE 747
A N +G EE+ E K +++ E G+
Sbjct: 439 -AKTNSSGTFSLVSEENFESKSPQEEAIALQEEGK 472
Score = 21.9 bits (45), Expect(3) = 5e-34
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 2 LHSNLLYVQRLAS 40
L+SNLLY+QR S
Sbjct: 203 LNSNLLYIQRYRS 215