BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013869
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   276   7e-72
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   274   3e-71
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   266   9e-69
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...   261   4e-67
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   260   5e-67

>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  276 bits (707), Expect = 7e-72
 Identities = 163/297 (54%), Positives = 194/297 (65%), Gaps = 1/297 (0%)
 Frame = +1

Query: 85  MASSTSSLNILSPTTPQTLYSSKPNTPLTPLNCXXXXXXXXXXXXXXXXXXINHFLVPRL 264
           MASS SSL+ LS  TPQTL   KP +  T L+                    +     R 
Sbjct: 1   MASSASSLHFLS-LTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSS----RF 55

Query: 265 VRNIAVSSEFNQVXXXXXXXSFLSGTMFDSSEDDVQEVPTFSPDLKIFVGNLPFTADSSE 444
           VR + +S +F+Q+               +  +D V+E   FSPDLKIFVGNLPF+ADS+ 
Sbjct: 56  VRKVTLS-DFDQIEDV------------EDGDDGVEEERNFSPDLKIFVGNLPFSADSAA 102

Query: 445 LASLFGRAGNVEMAEVIYDKMSGRSRGFGFVTMSSAKEVEAAVRQFNGYELDGRELRVNS 624
           LA LF RAGNVEM EVIYDK++GRSRGFGFVTMSS +EVEAA +QFNGYELDGR LRVNS
Sbjct: 103 LAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNS 162

Query: 625 GPPPPKRDXXXXXXXXXXXXXXXXXXXXXXXXXVYVGNLSWGVDDLALQNLFRDQGKVME 804
           GPPP KR+                         VYVGNL+WGVD  AL+ LF +QGKV++
Sbjct: 163 GPPPEKRE------NSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVD 216

Query: 805 ARVVYDRNSGRSRGFGFVTFSSAEEVNSAIEALDGADLDGRTIRVSPAESL-QRRQF 972
           A+VVYDR+SGRSRGFGFVT+SSAEEVN+AIE+LDG DL+GR IRVSPAE+   RRQF
Sbjct: 217 AKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  274 bits (701), Expect = 3e-71
 Identities = 160/297 (53%), Positives = 192/297 (64%), Gaps = 1/297 (0%)
 Frame = +1

Query: 85  MASSTSSLNILSPTTPQTLYSSKPNTPLTPLNCXXXXXXXXXXXXXXXXXXINHFLVPRL 264
           MASS SSL+ LS  TPQTL   KP +  T L+                    +     R 
Sbjct: 1   MASSASSLHFLS-LTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFSS----RF 55

Query: 265 VRNIAVSSEFNQVXXXXXXXSFLSGTMFDSSEDDVQEVPTFSPDLKIFVGNLPFTADSSE 444
           VR + +  +F+Q+               +  ++ V+E   FSPDLKIFVGNL F+ADS+ 
Sbjct: 56  VRKVTLP-DFDQIEDV------------EDGDEGVEEERNFSPDLKIFVGNLLFSADSAA 102

Query: 445 LASLFGRAGNVEMAEVIYDKMSGRSRGFGFVTMSSAKEVEAAVRQFNGYELDGRELRVNS 624
           LA LF RAGNVEM EVIYDK++GRSRGFGFVTMSS +EVEAA +QFNGYELDGR LRVNS
Sbjct: 103 LAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNS 162

Query: 625 GPPPPKRDXXXXXXXXXXXXXXXXXXXXXXXXXVYVGNLSWGVDDLALQNLFRDQGKVME 804
           GPPP KR+                         VYVGNL+WGVD  AL+ LF +QGKV++
Sbjct: 163 GPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVD 222

Query: 805 ARVVYDRNSGRSRGFGFVTFSSAEEVNSAIEALDGADLDGRTIRVSPAESL-QRRQF 972
           A+VVYDR+SGRSRGFGFVT+SSAEEVN+AIE+LDG DL+GR IRVSPAE+   RRQF
Sbjct: 223 AKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  266 bits (680), Expect = 9e-69
 Identities = 155/304 (50%), Positives = 190/304 (62%), Gaps = 10/304 (3%)
 Frame = +1

Query: 91  SSTSSLNILSPTTPQTLYSSKPNTPL---TPLNCXXXXXXXXXXXXXXXXXXINHFLVPR 261
           +S SSL + S + P+TL  SKP +      P +C                      L  R
Sbjct: 2   ASASSLVLPSLSLPKTLAISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLT-LSSR 60

Query: 262 LVRNIAVSSEFNQVXXXXXXXSFLSGTMFDSSEDDVQEVPTFSPDLKIFVGNLPFTADSS 441
            VRN+AVSS++ Q              + D  E      P+FSPDLK+FVGNLPF  DS+
Sbjct: 61  FVRNVAVSSDYEQD----------EDVLSDEGE------PSFSPDLKLFVGNLPFNVDSA 104

Query: 442 ELASLFGRAGNVEMAEVIYDKMSGRSRGFGFVTMSSAKEVEAAVRQFNGYELDGRELRVN 621
            LA LF +AGNVEM EVIYDK++GRSRGFGFVTMS+ +EVEAA +QFNGYEL+GR+LRVN
Sbjct: 105 GLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVN 164

Query: 622 SGPPPPKR-------DXXXXXXXXXXXXXXXXXXXXXXXXXVYVGNLSWGVDDLALQNLF 780
           SGPPP +R       +                         +YVGNLSWGVDDLAL+ LF
Sbjct: 165 SGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLF 224

Query: 781 RDQGKVMEARVVYDRNSGRSRGFGFVTFSSAEEVNSAIEALDGADLDGRTIRVSPAESLQ 960
            +QGKV EARV+YDR +GRSRGFGFVT++SAEEVN AIE+LDG DL+GR+IRV+ AE+  
Sbjct: 225 SEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARP 284

Query: 961 RRQF 972
           RRQF
Sbjct: 285 RRQF 288


>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
           Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
           29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score =  261 bits (666), Expect = 4e-67
 Identities = 156/314 (49%), Positives = 191/314 (60%), Gaps = 19/314 (6%)
 Frame = +1

Query: 88  ASSTSSLNILSPTTPQTLYSSKPNTPLTPLNCXXXXXXXXXXXXXXXXXXINHFLVPRLV 267
           +SS SSL  L   TPQT  S KPN+ L+                         F +P   
Sbjct: 3   SSSVSSLQFLF-VTPQTPSSLKPNSTLS------------------------FFSLPSSS 37

Query: 268 RNIAVSSEFNQVXXXXXXXSFLSGTM----FDSSEDDVQ--EVPTFSPDLKIFVGNLPFT 429
            N+++SS    +       S  S  +    FD  EDDV+  E P FS DLK+FVGNLPF+
Sbjct: 38  LNLSLSSSSTGLCSIKPFESSFSTRVALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFS 97

Query: 430 ADSSELASLFGRAGNVEMAEVIYDKMSGRSRGFGFVTMSSAKEVEAAVRQFNGYELDGRE 609
            DS+ LA LF RAGNVEM EVIYDK++GRSRGFGFVTMS+ +EVEAA +QFNGYE+DGR 
Sbjct: 98  VDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRA 157

Query: 610 LRVNSGPPPPKRD-------------XXXXXXXXXXXXXXXXXXXXXXXXXVYVGNLSWG 750
           +RVN+GP P KR+                                      VYVGNLSWG
Sbjct: 158 IRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWG 217

Query: 751 VDDLALQNLFRDQGKVMEARVVYDRNSGRSRGFGFVTFSSAEEVNSAIEALDGADLDGRT 930
           VDDLAL+ LF +QG V++A+VVYDR+SGRSRGFGFVT+SS++EVN AI++L+G DLDGR+
Sbjct: 218 VDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRS 277

Query: 931 IRVSPAESLQRRQF 972
           IRVS AE   RRQF
Sbjct: 278 IRVSAAEERPRRQF 291


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  260 bits (665), Expect = 5e-67
 Identities = 154/301 (51%), Positives = 190/301 (63%), Gaps = 5/301 (1%)
 Frame = +1

Query: 85  MASSTSSLNILSPTTPQTLYSSKPNTPLTPLNCXXXXXXXXXXXXXXXXXXINHFLVP-- 258
           M++S +SL + S T  +TL SS P   L  LN                    +H + P  
Sbjct: 1   MSASAASLTLPSLTL-KTLSSSNPKFKLFSLNPSSSIRLLSNPISISSFLLPSHRVSPPF 59

Query: 259 --RLVRNIAVSSEFNQVXXXXXXXSFLSGTMFDSSEDDVQEVPTFSPDLKIFVGNLPFTA 432
             R VRN+AVSS++ Q            GT+    +D      +++PDLK+FVGNLPFT 
Sbjct: 60  SSRFVRNVAVSSDYGQE----------EGTLEVDGDDS-----SYAPDLKLFVGNLPFTV 104

Query: 433 DSSELASLFGRAGNVEMAEVIYDKMSGRSRGFGFVTMSSAKEVEAAVRQFNGYELDGREL 612
           DS++LA LF  AG VE  EVIYDK +GRSRGFGFVTMS+  EVEAA +QFNGYELDGR L
Sbjct: 105 DSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLL 164

Query: 613 RVNSGPPPPKRDXXXXXXXXXXXXXXXXXXXXXXXXXVYVGNLSWGVDDLALQNLFRDQG 792
           RVN GPPPPKRD                         V+V NL+WGVDDL L+NLFR++G
Sbjct: 165 RVNYGPPPPKRD-------DSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLFREKG 217

Query: 793 KVMEARVVYDRNSGRSRGFGFVTFSSAEEVNSAIEALDGADLDGRTIRVSPAESL-QRRQ 969
            V+EA+VVYDR+SG+SRGFGFVT++SAEEVN AI++LDG DLDGR IRV+ AE+   RRQ
Sbjct: 218 NVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPRRQ 277

Query: 970 F 972
           F
Sbjct: 278 F 278