BLASTX nr result

ID: Lithospermum22_contig00013834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013834
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              191   2e-46
ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|1...   189   5e-46
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   189   7e-46
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   189   9e-46
gb|AFK42989.1| unknown [Lotus japonicus]                              187   3e-45

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  191 bits (484), Expect = 2e-46
 Identities = 94/97 (96%), Positives = 96/97 (98%)
 Frame = -2

Query: 787 KMKLVRFLMKLNNETVSIELKNGTIVHGTILGVDVSMNTHLKTVKLTLKGKNPVTLDHLS 608
           KMKLVRFLMKLNNETVSIELKNGT+VHGTI GVD+SMNTHLKTVKLTLKGKNPVTLDHLS
Sbjct: 30  KMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLS 89

Query: 607 VRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 497
           VRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 90  VRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 126


>ref|XP_002302121.1| predicted protein [Populus trichocarpa] gi|118482633|gb|ABK93236.1|
           unknown [Populus trichocarpa]
           gi|118488779|gb|ABK96200.1| unknown [Populus
           trichocarpa] gi|222843847|gb|EEE81394.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score =  189 bits (481), Expect = 5e-46
 Identities = 93/98 (94%), Positives = 97/98 (98%)
 Frame = -2

Query: 784 MKLVRFLMKLNNETVSIELKNGTIVHGTILGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 605
           MKLVRFLMKLNNETVSIELKNGT+VHGTI GVD+SMNTHLKTVKLT+KGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSV 60

Query: 604 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAV 491
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRA+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAL 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  189 bits (480), Expect = 7e-46
 Identities = 94/96 (97%), Positives = 95/96 (98%)
 Frame = -2

Query: 784 MKLVRFLMKLNNETVSIELKNGTIVHGTILGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 605
           MKLVRFLMKLNNETVSIELKNGTIVHGTI GVD+SMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 604 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 497
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  189 bits (479), Expect = 9e-46
 Identities = 93/96 (96%), Positives = 95/96 (98%)
 Frame = -2

Query: 784 MKLVRFLMKLNNETVSIELKNGTIVHGTILGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 605
           MKLVRFLMKLNNETVSIELKNGT+VHGTI GVD+SMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 604 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 497
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGR 96


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score =  187 bits (475), Expect = 3e-45
 Identities = 93/95 (97%), Positives = 94/95 (98%)
 Frame = -2

Query: 784 MKLVRFLMKLNNETVSIELKNGTIVHGTILGVDVSMNTHLKTVKLTLKGKNPVTLDHLSV 605
           MKLVRFLMKLNNETVSIELKNGTIVHGTI GVD+SMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 604 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 500
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 95


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