BLASTX nr result

ID: Lithospermum22_contig00013825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013825
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273204.1| PREDICTED: copper transporter 6 [Vitis vinif...    69   4e-10
emb|CAN63587.1| hypothetical protein VITISV_004791 [Vitis vinifera]    64   1e-08
emb|CAN81722.1| hypothetical protein VITISV_001182 [Vitis vinifera]    64   1e-08
gb|AFK49213.1| unknown [Medicago truncatula]                           59   4e-07
ref|XP_002309099.1| copper transporter [Populus trichocarpa] gi|...    58   7e-07

>ref|XP_002273204.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496074|gb|ADW93914.1| copper transporter [Vitis
           vinifera]
          Length = 139

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
 Frame = +1

Query: 34  PPRSVNQ----QHSSYWASYLMTFFQGWPMIQEFSSYCFSICLVFFLGFAVEICSVLRTK 201
           PP   N     Q+S YW+   +  F GWP    F  Y  ++  VF L  AVE+ S+  T 
Sbjct: 10  PPSDDNMMMMMQNSFYWSKDAIILFSGWPNHSPFM-YILALLFVFLLAVAVEVLSIPPTL 68

Query: 202 QPPRGVFRAYIWDSLIHGTRMCLGYLIIVAIVSTDYSFLVAAALGHAIGNFMVNVYQYYS 381
           +       A +  +++H  RM LGYL+++A++S +   L+ A  GHA+G F +N Y+  S
Sbjct: 69  KQGTIPTVAALTQTVVHAVRMGLGYLVMLAVMSFNVGVLLVAIAGHAVG-FFLNKYRALS 127


>emb|CAN63587.1| hypothetical protein VITISV_004791 [Vitis vinifera]
          Length = 256

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
 Frame = +1

Query: 58  HSSYWA-SYLMTFFQGWPMIQEFSSYCFSICLVFFLGFAVEICSVLRTKQPPRGVFRAYI 234
           H+S+W  + +M  F GWP       Y  ++ LVF L     IC +       +      +
Sbjct: 19  HTSFWVGTNVMVLFPGWPGNYSLLHYYLALLLVFVLALLTPICGMCSMPANEQMAPMTLL 78

Query: 235 WDSLIHGTRMCLGYLIIVAIVSTDYSFLVAAALGHAIGNFMVNVYQ 372
             ++ HG R CL YL+++++V+ +    +AA  GH IG F ++ YQ
Sbjct: 79  LYAMRHGLRKCLFYLVVLSVVTFNVGVFLAAIAGHVIGYFALSTYQ 124


>emb|CAN81722.1| hypothetical protein VITISV_001182 [Vitis vinifera]
          Length = 136

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = +1

Query: 58  HSSYWA-SYLMTFFQGWPMIQEFSSYCFSICLVFFLGFAVEICSVLRTKQPPRGVFRAYI 234
           H+S+W  + +M  F GWP       Y  ++ LVF L     IC +       +      +
Sbjct: 19  HTSFWVGTNVMVLFPGWPGNYILLHYYLALLLVFVLALLTPICGMCSMPANKQMAPMTLL 78

Query: 235 WDSLIHGTRMCLGYLIIVAIVSTDYSFLVAAALGHAIGNFMVNVYQYYSNKTEGNT 402
             ++ HG R CL YL+++++V+ +    +AA  GH IG F ++    Y ++T  +T
Sbjct: 79  LYAMRHGLRKCLFYLVVLSVVTFNVGVFLAAIAGHVIGYFALSACMLYHHRTTTDT 134


>gb|AFK49213.1| unknown [Medicago truncatula]
          Length = 137

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/111 (27%), Positives = 53/111 (47%)
 Frame = +1

Query: 67  YWASYLMTFFQGWPMIQEFSSYCFSICLVFFLGFAVEICSVLRTKQPPRGVFRAYIWDSL 246
           YW    +  F GWP  Q    Y  ++  VFFL   VE      T +      +  +  ++
Sbjct: 18  YWGKDAIILFPGWPN-QSLGMYILALSFVFFLALVVEFLPNKSTIKQGTNHIKGGLIQAI 76

Query: 247 IHGTRMCLGYLIIVAIVSTDYSFLVAAALGHAIGNFMVNVYQYYSNKTEGN 399
           I+  R+   YL+++A++S +    +AA +GH IG F+V  +  ++   E N
Sbjct: 77  IYFFRISFLYLVMLAVMSFNIGIFIAAVVGHTIGFFLVKSHDIFAANKEQN 127


>ref|XP_002309099.1| copper transporter [Populus trichocarpa]
           gi|222855075|gb|EEE92622.1| copper transporter [Populus
           trichocarpa]
          Length = 148

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
 Frame = +1

Query: 37  PRSVNQQHSSYWASYLMTFFQGWPMIQEFSSYCFSICLVFFLGFAVEICSVLRT-KQPPR 213
           P  +    S YW    +  F GWP       Y  +   VF L  A+EI SV  T K+   
Sbjct: 24  PSDMMMHMSFYWGKDAIILFSGWPN-GSLGMYMLAFFCVFLLAAAIEIFSVSPTAKRGTH 82

Query: 214 GVFRAYIWDSLIHGTRMCLGYLIIVAIVSTDYSFLVAAALGHAIGNFMVNVYQY---YSN 384
                 +  + ++  RM   Y++++A++S +    +AA  GH +G F+V V      Y N
Sbjct: 83  NPIAGALIQTCVYAVRMGFAYMVMLAVMSFNLGIFIAAVAGHTVGFFLVKVRALAIAYKN 142

Query: 385 KT 390
           +T
Sbjct: 143 ET 144


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