BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013755
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   238   1e-60
ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   230   3e-58
pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1...   229   7e-58

>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  238 bits (608), Expect = 1e-60
 Identities = 120/184 (65%), Positives = 141/184 (76%), Gaps = 5/184 (2%)
 Frame = +1

Query: 391 DQMSNKARKKARKELPEFVLKHKLDLCSKNGDFDEGIRLYEEAKLNCTSINIYHYNALLY 570
           + MSNKARKKAR+E PE VL+ KLD+CSK GD  E +RLY+EA+     ++ +HYN LLY
Sbjct: 27  ETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSRGVPLSQHHYNVLLY 86

Query: 571 LCSCS-----EGVDNWGLDKGFEIFKQMGIDKVVPNEATFTSAARLAAKKEDPEMAFELV 735
           LCSCS     E V N  L +GFEIFKQMG+D + PNEATFTSAARLA   EDPEMAF LV
Sbjct: 87  LCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLV 146

Query: 736 KRMKGCGIEPKLRSYGPALFGFCKKGLSDKAYEVDRHMVESGVEAEEGEISALLKVSADM 915
           K+MK CGI PKLRSYGP LFGFCKKG +D+AYEVD HM+ESGV AEE E+ ALL +S + 
Sbjct: 147 KQMKSCGIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALLGLSVES 206

Query: 916 KRAD 927
           +R D
Sbjct: 207 RRVD 210


>ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|222848225|gb|EEE85772.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  234 bits (598), Expect = 2e-59
 Identities = 120/208 (57%), Positives = 151/208 (72%), Gaps = 4/208 (1%)
 Frame = +1

Query: 316 VKKRSNFCTITAVIKDPXXXXXXXXDQMSNKARKKARKELPEFVLKHKLDLCSKNGDFDE 495
           +KK++ FC                 + +S + +KKAR++ PE VL+ KLD+CSK GD  E
Sbjct: 1   MKKKATFCNSAISATSQSDEKAVGGNVVSKRLKKKARRDAPEGVLRFKLDMCSKVGDVVE 60

Query: 496 GIRLYEEAKLNCTSINIYHYNALLYLCSCSEGVDNWGLD----KGFEIFKQMGIDKVVPN 663
           G+RLY+EA+ N   +N +HYN +LYLCS + G +   L     +GFEIF+QM IDKV PN
Sbjct: 61  GLRLYDEARRNGVELNQHHYNVMLYLCSQNRGENGSDLKLACKRGFEIFQQMIIDKVPPN 120

Query: 664 EATFTSAARLAAKKEDPEMAFELVKRMKGCGIEPKLRSYGPALFGFCKKGLSDKAYEVDR 843
           EATFT+AARLA+  EDPEMAF+LVK+MKG GI PKLRSYGP LFGFCKKG+ DKAYEVD 
Sbjct: 121 EATFTNAARLASVMEDPEMAFDLVKQMKGFGIMPKLRSYGPPLFGFCKKGMVDKAYEVDA 180

Query: 844 HMVESGVEAEEGEISALLKVSADMKRAD 927
           HM+ESGV AEE E+S+LLK+SAD+  AD
Sbjct: 181 HMIESGVVAEEPELSSLLKLSADVNNAD 208


>ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|222836038|gb|EEE74459.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  234 bits (598), Expect = 2e-59
 Identities = 122/178 (68%), Positives = 142/178 (79%), Gaps = 1/178 (0%)
 Frame = +1

Query: 397 MSNKARKKARKELPEFVLKHKLDLCSKNGDFDEGIRLYEEAKLNCTSINIYHYNALLYLC 576
           MS + +KKAR+E PE VLK KLD CSK GD  EG+RLY+EA+ N   +N +HYN LLYLC
Sbjct: 1   MSLREKKKARREAPEGVLKFKLDTCSKRGDVVEGLRLYDEARKNGVELNQHHYNVLLYLC 60

Query: 577 SCSEGVDNWGLDK-GFEIFKQMGIDKVVPNEATFTSAARLAAKKEDPEMAFELVKRMKGC 753
           S + G +   L K GFEIF+QM IDKV PNEATFT+AARLA+  EDPEMAF+LVK+MKG 
Sbjct: 61  SQNGGENVSDLRKQGFEIFQQMIIDKVPPNEATFTNAARLASAMEDPEMAFDLVKQMKGF 120

Query: 754 GIEPKLRSYGPALFGFCKKGLSDKAYEVDRHMVESGVEAEEGEISALLKVSADMKRAD 927
           GI PKLRSYGP LFGFCKKG++DKAYEVD HM+E GV AEE E+SALLKVSAD+  AD
Sbjct: 121 GILPKLRSYGPPLFGFCKKGMADKAYEVDAHMIEYGVVAEEPELSALLKVSADVNNAD 178


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  230 bits (587), Expect = 3e-58
 Identities = 118/182 (64%), Positives = 139/182 (76%), Gaps = 5/182 (2%)
 Frame = +1

Query: 397 MSNKARKKARKELPEFVLKHKLDLCSKNGDFDEGIRLYEEAKLNCTSINIYHYNALLYLC 576
           MSNKARKKAR+E PE VL+ KLD+CSK GD  E +RLY+EA+     ++ ++YN LLYLC
Sbjct: 398 MSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSLGVPLSQHNYNVLLYLC 457

Query: 577 SCS-----EGVDNWGLDKGFEIFKQMGIDKVVPNEATFTSAARLAAKKEDPEMAFELVKR 741
           SCS     E V N  L +GFEIFKQMG+D + PNEATFTSAARLA   EDPEMAF LVK+
Sbjct: 458 SCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLVKQ 517

Query: 742 MKGCGIEPKLRSYGPALFGFCKKGLSDKAYEVDRHMVESGVEAEEGEISALLKVSADMKR 921
           MK CGI PKLRSYGP LFGFCKKG +++AYEVD HMVESGV AEE E+ ALL +S + + 
Sbjct: 518 MKSCGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALLGLSVESRW 577

Query: 922 AD 927
            D
Sbjct: 578 VD 579


>pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
           A. Thaliana With Mn gi|406855805|pdb|4G26|A Chain A,
           Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1)
           From A. Thaliana With Ca
          Length = 501

 Score =  229 bits (584), Expect = 7e-58
 Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 4/183 (2%)
 Frame = +1

Query: 391 DQMSNKARKKARKELPEFVLKHKLDLCSKNGDFDEGIRLYEEAKLNCTSINIYHYNALLY 570
           + +S KA+KKA ++ PE +LK KLD+CSK GD  E +RLY+EA+ N   ++ YHYN LLY
Sbjct: 10  ENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLY 69

Query: 571 LCSCSEGVD----NWGLDKGFEIFKQMGIDKVVPNEATFTSAARLAAKKEDPEMAFELVK 738
           +CS +E       N GL +GF+IFKQM +DKVVPNEATFT+ ARLA  K+DPEMAF++VK
Sbjct: 70  VCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVK 129

Query: 739 RMKGCGIEPKLRSYGPALFGFCKKGLSDKAYEVDRHMVESGVEAEEGEISALLKVSADMK 918
           +MK  GI+P+LRSYGPALFGFC+KG +DKAYEVD HMVES V  EE E++ALLKVS D K
Sbjct: 130 QMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTK 189

Query: 919 RAD 927
            AD
Sbjct: 190 NAD 192