BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013751
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...   336   5e-90
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...   279   7e-73
ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816...   266   4e-69
ref|XP_003621961.1| Pentatricopeptide repeat-containing protein ...   229   9e-58
ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat...   223   4e-56

>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
            unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  336 bits (861), Expect = 5e-90
 Identities = 170/306 (55%), Positives = 223/306 (72%), Gaps = 1/306 (0%)
 Frame = -2

Query: 917  NFLSFSIVITNLCKLNALVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIREAFQLL 738
            NFL+FSI + NLC+LN LV + DV   M+RKGY  + E + M+L+CF K GR  EAFQ+L
Sbjct: 190  NFLTFSIALCNLCRLNDLVGVGDVLRMMLRKGYCPSVEIFSMVLNCFCKVGRFAEAFQVL 249

Query: 737  GLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLIKGFLES 558
            GLM +LG  I V  WSILID + + G++  A  LL KMVE+G SPNV TYT LIKGF+ES
Sbjct: 250  GLMATLGIPISVTVWSILIDGYRRIGKIGRAGNLLEKMVETGCSPNVVTYTTLIKGFMES 309

Query: 557  NKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLSPDAYTF 378
               S+A ++L IM +KGC  DLVL NVLI  LSK+GR +DAL +F+SL +R + PD+YTF
Sbjct: 310  GMVSRALDVLRIMGTKGCDYDLVLYNVLIDCLSKVGRYDDALGIFFSLPKRKMVPDSYTF 369

Query: 377  CSMIDVVCSLRQYALLPVIL-DGFTVQPDLVVCNSLINYFCKAGHPVGAIEFYEDMIDRG 201
             S++  +C  ++++LLP +   G  V  DLVVCNSL++YFCKAG P  A+EFY DM+DRG
Sbjct: 370  SSILSAICLSQRFSLLPKLFSSGLEVHTDLVVCNSLLSYFCKAGFPSLAVEFYNDMLDRG 429

Query: 200  YAPDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHTVIVSGLIKSGKFNRAI 21
            +  D+YSF  L+  LC +GR D+AVNVY GI+ +H  LDA  HTVI+ GLIK+GKF+RA+
Sbjct: 430  FMIDQYSFVGLLSGLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHRAV 489

Query: 20   TLFREA 3
             LF++A
Sbjct: 490  RLFKKA 495



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 5/292 (1%)
 Frame = -2

Query: 905  FSIVITNLCKLNALVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIREAFQLLGLMI 726
            +SI+I    ++  +    ++  +M+  G   N  TY  ++  F ++G +  A  +L +M 
Sbjct: 264  WSILIDGYRRIGKIGRAGNLLEKMVETGCSPNVVTYTTLIKGFMESGMVSRALDVLRIMG 323

Query: 725  SLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLIKGFLESNKSS 546
            + G    +  +++LID   K GR D A  +   + +    P+  T++ ++     S +  
Sbjct: 324  TKGCDYDLVLYNVLIDCLSKVGRYDDALGIFFSLPKRKMVPDSYTFSSILSAICLSQR-- 381

Query: 545  KAFELLYIMESKGCYV--DLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLSPDAYTFCS 372
              F LL  + S G  V  DLV+CN L+    K G  + A++ +  + +RG   D Y+F  
Sbjct: 382  --FSLLPKLFSSGLEVHTDLVVCNSLLSYFCKAGFPSLAVEFYNDMLDRGFMIDQYSFVG 439

Query: 371  MIDVVCSLRQYALLPVILDGFTVQP---DLVVCNSLINYFCKAGHPVGAIEFYEDMIDRG 201
            ++  +C   +      +  G  V     D  +   +I    KAG    A+  ++  +   
Sbjct: 440  LLSGLCGSGRVDEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHRAVRLFKKAMVER 499

Query: 200  YAPDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHTVIVSGLIK 45
            Y  D  S+T  I  L K GRT +A  +Y  +  +    +A  + +I+S   K
Sbjct: 500  YTLDAVSYTVAIYGLLKGGRTGEACILYNQMKEAGLAPNAHTYNIILSCFCK 551



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
 Frame = -2

Query: 791  ILSCFGKAGRIREAFQLLGLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESG 612
            +LS F KAG    A +    M+  GF I    +  L+   C  GR+D A  +   ++ + 
Sbjct: 405  LLSYFCKAGFPSLAVEFYNDMLDRGFMIDQYSFVGLLSGLCGSGRVDEAVNVYSGILVNH 464

Query: 611  YSPNVETYTPLIKGFLESNKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDAL 432
               +   +T +I G +++ K  +A  L      +   +D V   V I+ L K GR  +A 
Sbjct: 465  SDLDAHIHTVIIGGLIKAGKFHRAVRLFKKAMVERYTLDAVSYTVAIYGLLKGGRTGEAC 524

Query: 431  DVFYSLQERGLSPDAYTFCSMIDVVCSLRQYALLPVILDGFTVQPDLVVCNSLI---NYF 261
             ++  ++E GL+P+A+T+  ++   C  R   ++  ++         + C++LI   N+ 
Sbjct: 525  ILYNQMKEAGLAPNAHTYNIILSCFCKERDMKMVKQMIQEMIAAGVELECDTLIRITNFL 584

Query: 260  CKAGHPVGAIEFYEDMIDRGYAPDKYSFTTLIGALCKAGRTDD 132
             K+           +M   G  P+K     L+  L    + +D
Sbjct: 585  FKSKFSHSVFNLLIEMWGAGLMPNKAIDALLLNGLSCGVKIND 627


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g16830-like [Cucumis sativus]
          Length = 665

 Score =  279 bits (713), Expect = 7e-73
 Identities = 140/303 (46%), Positives = 205/303 (67%)
 Frame = -2

Query: 917  NFLSFSIVITNLCKLNALVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIREAFQLL 738
            NFL+F+IV+ NL K   L+ I D    M+R GY  N  T+ ++L+   K GR+ EA+Q+ 
Sbjct: 196  NFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLNGLCKLGRLAEAYQVW 255

Query: 737  GLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLIKGFLES 558
            G+M + G  + V  W+I+ID FC+  R + A  L++KM +SG SPN+ TYT LIKG++ +
Sbjct: 256  GIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSPNIVTYTTLIKGYIYA 315

Query: 557  NKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLSPDAYTF 378
             + S AF++L I+ES+G   DL+L NVLI SL+K  R NDAL +F SL +R + PD YTF
Sbjct: 316  QRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNILPDCYTF 375

Query: 377  CSMIDVVCSLRQYALLPVILDGFTVQPDLVVCNSLINYFCKAGHPVGAIEFYEDMIDRGY 198
             S+++ +C  ++  LLP ++DGF V+ DLV CNSL++Y  KAG    A+E Y +M++ G 
Sbjct: 376  SSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFAALALELYNNMVNGGL 435

Query: 197  APDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHTVIVSGLIKSGKFNRAIT 18
             PDKYS   ++  LC++ R  +AV +Y GI+ ++ G+DA  HTVI+ GLIK+GKF+ AI 
Sbjct: 436  MPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLIKAGKFHSAIR 495

Query: 17   LFR 9
            +FR
Sbjct: 496  IFR 498


>ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
          Length = 1122

 Score =  266 bits (681), Expect = 4e-69
 Identities = 144/312 (46%), Positives = 195/312 (62%), Gaps = 7/312 (2%)
 Frame = -2

Query: 917  NFLSFSIVITNLCKLNA------LVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIR 756
            NF +F I++ +L KLN       L  I  +   ++  GY  +  T+ M+L+   K     
Sbjct: 170  NFFTFHILLLHLSKLNNNNLNLYLPHIARILRLLLWAGYSPSPLTFQMLLNSLCKINAFP 229

Query: 755  EAFQLLGLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLI 576
            +A+QLL LM +LG    V  W+ILI  +CK GRL +A  L   M+++G SPNV TYT L 
Sbjct: 230  QAYQLLALMTALGINFSVNIWTILIHNYCKFGRLRLANNLFHNMLQTGCSPNVVTYTILF 289

Query: 575  KGFLESNKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLS 396
            K F++SN  + AF L  IM S G   DL+LCNVLI  LSK GRC DA+ VF SL ER L 
Sbjct: 290  KAFMQSNMPTPAFRLFNIMLSSGQSPDLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLK 349

Query: 395  PDAYTFCSMIDVVCSLRQYALLP-VILDGFTVQPDLVVCNSLINYFCKAGHPVGAIEFYE 219
            PD+YTF S++  +C  R + LLP ++L    +  DLV CN+L++   KA  P  A+ FY+
Sbjct: 350  PDSYTFASLLSTICRSRMFYLLPKLVLVSRHIDADLVFCNALLSSLTKADLPSLAVGFYD 409

Query: 218  DMIDRGYAPDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHTVIVSGLIKSG 39
             MID G+ PDKY+F  L+ ALC AGR D AVNVY G+V S+   DA  HTVI+ GL+K+G
Sbjct: 410  HMIDEGFVPDKYTFAGLLSALCCAGRVDKAVNVYHGVVMSYHDTDAHIHTVIIVGLLKTG 469

Query: 38   KFNRAITLFREA 3
            KF++A+++ R A
Sbjct: 470  KFHKAVSVLRFA 481


>ref|XP_003621961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355496976|gb|AES78179.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  229 bits (583), Expect = 9e-58
 Identities = 125/303 (41%), Positives = 179/303 (59%), Gaps = 1/303 (0%)
 Frame = -2

Query: 917  NFLSFSIVITNLCKLNALVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIREAFQLL 738
            NFL+F+I + +L   N +V++K V   M+R  Y  N  T+  +L+ F K    R+ +Q+L
Sbjct: 143  NFLTFNIALFHLSNFNDIVNVKYVLREMLRLRYCPNASTFSAVLNAFCKMNAFRQVYQIL 202

Query: 737  GLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLIKGFLES 558
            GLMI LG  + V  W++LI  FCK G+LDVA  L  KM++S  SPN  TYTPLIK  +ES
Sbjct: 203  GLMIGLGIELSVNVWTVLIHHFCKLGKLDVADDLFDKMIQSCCSPNSVTYTPLIKAVMES 262

Query: 557  NKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLSPDAYTF 378
            +  + A  L   M S G   DLV  N+LI  LSK G   +A+ VF   +++   PD YTF
Sbjct: 263  DDVTLALRLEQKMNSVGIVPDLVFYNMLIDCLSKSGMHEEAIRVF---EQKNFKPDKYTF 319

Query: 377  CSMIDVVCSLRQYALLPVILDGFT-VQPDLVVCNSLINYFCKAGHPVGAIEFYEDMIDRG 201
             S++  +C   Q+ LLP ++     +  DLV CN+L+  + KAG+   A+E YE MI  G
Sbjct: 320  TSLLSAICRSEQFDLLPKLVQHCKHISRDLVFCNALLISYVKAGYSSRALELYERMISEG 379

Query: 200  YAPDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHTVIVSGLIKSGKFNRAI 21
            + PDKY+F  L+ ALC   R D+AV V++ +   H   D   HTVI + L K+G++ +A 
Sbjct: 380  FKPDKYTFAGLLSALCAENRNDEAVKVWRAVTMDHTD-DVHIHTVISNELKKAGQYEQAS 438

Query: 20   TLF 12
             +F
Sbjct: 439  DVF 441



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 4/283 (1%)
 Frame = -2

Query: 905  FSIVITNLCKLNALVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIREAFQLLGLMI 726
            ++++I + CKL  L    D+  +M++     N  TY  ++    ++  +  A +L   M 
Sbjct: 217  WTVLIHHFCKLGKLDVADDLFDKMIQSCCSPNSVTYTPLIKAVMESDDVTLALRLEQKMN 276

Query: 725  SLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLIKGFLESNKSS 546
            S+G    +  +++LID   K G  + A   +R   +  + P+  T+T L+     S +  
Sbjct: 277  SVGIVPDLVFYNMLIDCLSKSGMHEEA---IRVFEQKNFKPDKYTFTSLLSAICRSEQ-- 331

Query: 545  KAFELL--YIMESKGCYVDLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLSPDAYTFCS 372
              F+LL   +   K    DLV CN L+ S  K G  + AL+++  +   G  PD YTF  
Sbjct: 332  --FDLLPKLVQHCKHISRDLVFCNALLISYVKAGYSSRALELYERMISEGFKPDKYTFAG 389

Query: 371  MIDVVCSLRQYALLPVILDGFTVQ--PDLVVCNSLINYFCKAGHPVGAIEFYEDMIDRGY 198
            ++  +C+  +      +    T+    D+ +   + N   KAG    A + +     + Y
Sbjct: 390  LLSALCAENRNDEAVKVWRAVTMDHTDDVHIHTVISNELKKAGQYEQASDVFISEAVKKY 449

Query: 197  APDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHT 69
              D  ++   I A  ++GRT +A  +Y  + ++  GL+  F T
Sbjct: 450  PLDSIAYGVGIDAHLRSGRTLEARTLYDQMKKN--GLEPNFQT 490


>ref|XP_003574395.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g16830-like [Brachypodium distachyon]
          Length = 623

 Score =  223 bits (569), Expect = 4e-56
 Identities = 115/305 (37%), Positives = 176/305 (57%)
 Frame = -2

Query: 917  NFLSFSIVITNLCKLNALVSIKDVHTRMMRKGYYLNGETYLMILSCFGKAGRIREAFQLL 738
            N+L+++IV+T+LC+      ++     M+++G   +  +   + +C  KAG + E  QL 
Sbjct: 166  NYLTYAIVLTHLCRAGDWSGVRTCFRAMLQQGLIPSSASLASVFACCSKAGTMSELLQLF 225

Query: 737  GLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESGYSPNVETYTPLIKGFLES 558
               +  G +I    WS LI   C  GRLD A ++L  MV  G SP V TYTPL++G   +
Sbjct: 226  SYALVSGRQITSVMWSCLIARICSEGRLDEACIILENMVRCGSSPTVVTYTPLVRGLFRA 285

Query: 557  NKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDALDVFYSLQERGLSPDAYTF 378
             +  K  ELL  M S GC  DLVL NVL+  + K  R ++ALD++ +L +  + PDAYT 
Sbjct: 286  GRHDKVSELLGSMASNGCNPDLVLYNVLMDCMMKERRYDEALDIYLNLHQSQIKPDAYTL 345

Query: 377  CSMIDVVCSLRQYALLPVILDGFTVQPDLVVCNSLINYFCKAGHPVGAIEFYEDMIDRGY 198
             +++ V+       LLP ++ G  +  DLV CNS+++  CK+G P  A++FY D I  G 
Sbjct: 346  STLVHVLQLSHNIDLLPRLILGSDISYDLVACNSVLSALCKSGFPSEALQFYIDKIGLGI 405

Query: 197  APDKYSFTTLIGALCKAGRTDDAVNVYKGIVRSHCGLDARFHTVIVSGLIKSGKFNRAIT 18
             PD YS+  L+ +LC+ GR D A+NVY+ ++ S+   DA  H+ I+ GL+   + N A  
Sbjct: 406  RPDSYSYVGLLDSLCQLGRIDHAINVYRSVLASNPDSDAYIHSSILRGLVSRRQNNMAFA 465

Query: 17   LFREA 3
            +FREA
Sbjct: 466  IFREA 470



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 3/200 (1%)
 Frame = -2

Query: 791 ILSCFGKAGRIREAFQLLGLMISLGFRICVRHWSILIDMFCKCGRLDVAYLLLRKMVESG 612
           +LS   K+G   EA Q     I LG R     +  L+D  C+ GR+D A  + R ++ S 
Sbjct: 380 VLSALCKSGFPSEALQFYIDKIGLGIRPDSYSYVGLLDSLCQLGRIDHAINVYRSVLASN 439

Query: 611 YSPNVETYTPLIKGFLESNKSSKAFELLYIMESKGCYVDLVLCNVLIHSLSKMGRCNDAL 432
              +   ++ +++G +   +++ AF +      +   +D+V   +++H L +     +A 
Sbjct: 440 PDSDAYIHSSILRGLVSRRQNNMAFAIFREAVRQNYALDVVCYTIVLHGLFRAHLIEEAC 499

Query: 431 DVFYSLQERGLSPDAYTFCSMIDVVCSLRQYALLPVIL---DGFTVQPDLVVCNSLINYF 261
           D+F  ++  G++P+  T+  M+  +C  +    +  +L   +   VQ D +  N ++   
Sbjct: 500 DLFDKMKHSGIAPNTCTYNVMLRGLCRTQDMHAVTQLLGEMECTNVQMDSISFNVVVVLL 559

Query: 260 CKAGHPVGAIEFYEDMIDRG 201
            K  H   AI    +M + G
Sbjct: 560 VKLQHISSAIGLIREMHNLG 579