BLASTX nr result

ID: Lithospermum22_contig00013733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013733
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   220   2e-55
ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   216   4e-54
ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   215   7e-54
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   215   9e-54

>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  220 bits (561), Expect = 2e-55
 Identities = 101/118 (85%), Positives = 108/118 (91%)
 Frame = +1

Query: 49  MGSGAPPAQIPTSFGHELRACLRCRLVKTYDQFRTNGCENCPFLKMDEDHEHVADCTTPN 228
           MGS A  AQIPTSFGHELRACLRCRLVKTYDQFR +GCENCPF KMDEDHE V DCTTPN
Sbjct: 1   MGSAA--AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 58

Query: 229 FTGIISVMDPSRSWAARWLRIGRFAPGCYTLAVSEELPEEMKNICEEERVTYVPPKRV 402
           FTGIISVMDPSRSWAARWLRIGRF PGCYTLAVSE LPE+++N+CE+ERV Y+PPKRV
Sbjct: 59  FTGIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116


>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  217 bits (553), Expect = 2e-54
 Identities = 100/118 (84%), Positives = 107/118 (90%)
 Frame = +1

Query: 49  MGSGAPPAQIPTSFGHELRACLRCRLVKTYDQFRTNGCENCPFLKMDEDHEHVADCTTPN 228
           MGS A  AQIPTSFGHELRACLRCRLVKTYDQFR +GCENC F KMDEDHE V DCTTPN
Sbjct: 1   MGSAA--AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPN 58

Query: 229 FTGIISVMDPSRSWAARWLRIGRFAPGCYTLAVSEELPEEMKNICEEERVTYVPPKRV 402
           FTGIISVMDPSRSWAARWLRIGRF PGCYTLAVSE LPE+++N+CE+ERV Y+PPKRV
Sbjct: 59  FTGIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  216 bits (550), Expect = 4e-54
 Identities = 96/112 (85%), Positives = 103/112 (91%)
 Frame = +1

Query: 67  PAQIPTSFGHELRACLRCRLVKTYDQFRTNGCENCPFLKMDEDHEHVADCTTPNFTGIIS 246
           PAQIPTSFGHELRACLRCRLVKTYDQFR +GCENCPF KMDEDHE V +CTTPNF GIIS
Sbjct: 5   PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFNGIIS 64

Query: 247 VMDPSRSWAARWLRIGRFAPGCYTLAVSEELPEEMKNICEEERVTYVPPKRV 402
           VMDP+RSWAARWLRIGRF PGCYTLAVSE LPE+++N+CEEERV Y PPKRV
Sbjct: 65  VMDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPKRV 116


>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  215 bits (548), Expect = 7e-54
 Identities = 97/115 (84%), Positives = 104/115 (90%)
 Frame = +1

Query: 58  GAPPAQIPTSFGHELRACLRCRLVKTYDQFRTNGCENCPFLKMDEDHEHVADCTTPNFTG 237
           G+ PAQIPTSFGHELRACLRCRLVKTYDQFR +GCENCPF KMDEDHE V DCTTPNF G
Sbjct: 2   GSVPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNG 61

Query: 238 IISVMDPSRSWAARWLRIGRFAPGCYTLAVSEELPEEMKNICEEERVTYVPPKRV 402
           IISVMDP+RSWAARWLRIGRF PGCYTLAVSE LPE+++ +CEEERV Y PPKRV
Sbjct: 62  IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPKRV 116


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  215 bits (547), Expect = 9e-54
 Identities = 96/110 (87%), Positives = 102/110 (92%)
 Frame = +1

Query: 70  AQIPTSFGHELRACLRCRLVKTYDQFRTNGCENCPFLKMDEDHEHVADCTTPNFTGIISV 249
           AQIPTSFGHELRACLRCRLVKTYDQFR +GCENCPF KMDEDHE V DCTTPNF GIIS+
Sbjct: 5   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISM 64

Query: 250 MDPSRSWAARWLRIGRFAPGCYTLAVSEELPEEMKNICEEERVTYVPPKR 399
           MDPSRSWAARWLRIGRF PGCYTLAVSE LPE+++N+CEEERV YVPPKR
Sbjct: 65  MDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYVPPKR 114


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