BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013731
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            69   6e-22
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    69   5e-21
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript...    86   2e-19
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    71   7e-18
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript...    72   3e-17

>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 68.6 bits (166), Expect(3) = 6e-22
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -2

Query: 522 FTVKSMWQQIRYVRGNSLWHKLVWFKGNVPKFGFTAWLLCKRRLPTRDRLQAWGIVDDNS 343
           F  K  W   R  +    W+K VWF    PK+   AW+  K RL T DR+ +W    D+S
Sbjct: 294 FNTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSS 353

Query: 342 CVLCGE-QEDIHHLFFSCQFSS 280
           CVLC    E   HLFF+C +S+
Sbjct: 354 CVLCHHLVETRDHLFFTCPYSA 375



 Score = 52.8 bits (125), Expect(3) = 6e-22
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
 Frame = -3

Query: 1001 AKVSWKEVNVPRY*GMEQCLHAKHI*NICVGK--------DTLWIRWLHSYRLKGVSIWG 846
            AKV+W +V  P+  G       K    + + K         +LW++WL  Y L+  S W 
Sbjct: 114  AKVAWSDVCTPKDEGGLGIRSLKEANKVSLLKLIWRMLSSTSLWVQWLRLYLLRKGSFWS 173

Query: 845  VHKRSVDTNTWSKMLNLILKMRPL----IVSKVGDGQHTSFLFDNWYPMGILDEVLSKRS 678
            +   S +T   S M   ILK R L    +   + +G +TSF FDNW  +G L +V   R 
Sbjct: 174  I---SGNTTLGSWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRG 230

Query: 677  VQILLIVL*RLSEEANGQVANQPIQKSRH 591
               + I L     EA   V N   ++ RH
Sbjct: 231  CIDMGITLHASVAEA---VVNHRPRRHRH 256



 Score = 30.0 bits (66), Expect(3) = 6e-22
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -3

Query: 275 IWRTLLMYLKDFHPPLNWRDELQWLLGVALGNSFKTRLRKLTSTCVVYNIWKERN 111
           +W TL   L   H    W   L+ L   +LG+     L + T    ++++WKERN
Sbjct: 377 VWSTLTRKLLSQHFTNRWEAILKLLTNKSLGHEVPF-LTRYTFQLTLHSLWKERN 430


>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 68.6 bits (166), Expect(4) = 5e-21
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -2

Query: 522 FTVKSMWQQIRYVRGNSLWHKLVWFKGNVPKFGFTAWLLCKRRLPTRDRLQAWGIVDDNS 343
           F  K  W   R  +    W+K VWF    PK+   AW+  K RL T DR+ +W    D+S
Sbjct: 266 FNTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSS 325

Query: 342 CVLCGE-QEDIHHLFFSCQFSS 280
           CVLC    E   HLFF+C +S+
Sbjct: 326 CVLCHHLVETRDHLFFTCPYSA 347



 Score = 41.6 bits (96), Expect(4) = 5e-21
 Identities = 26/78 (33%), Positives = 36/78 (46%)
 Frame = -1

Query: 1168 ARQLSYASRLSLLKAVIFGVYNF*CQTVFLPKLMIKEINGILQNVLWCDKCEGKEEQK*A 989
            AR LS+A RL L+ +VI  + NF      LP   IKEI+ I  + LW       ++ K A
Sbjct: 58   ARHLSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVA 117

Query: 988  GRKSMSQDIEEWNNACMP 935
                       W++ C P
Sbjct: 118  -----------WSDVCTP 124



 Score = 36.6 bits (83), Expect(4) = 5e-21
 Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
 Frame = -3

Query: 923 NICVGKDT--LWIRWLHSYRLKGVSIWGVHKRSVDTNTWSKMLNLILKMRPL----IVSK 762
           ++C  KD   L IR L     KG S W +   S +T   S M   ILK R L    +   
Sbjct: 120 DVCTPKDEGGLGIRSLKEAN-KG-SFWSI---SGNTTLGSWMWKKILKHRALASGFVKHD 174

Query: 761 VGDGQHTSFLFDNWYPMGILDEVLSKRSVQILLIVL*RLSEEANGQVANQPIQKSRH 591
           + +G +TSF FDNW  +G L +V   R    + I L     EA   V N   ++ RH
Sbjct: 175 IHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEA---VVNHRPRRHRH 228



 Score = 21.2 bits (43), Expect(4) = 5e-21
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 164 LRKLTSTCVVYNIWKERN 111
           L + T    ++++WKERN
Sbjct: 352 LTRYTFQLTLHSLWKERN 369


>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 295

 Score = 86.3 bits (212), Expect(3) = 2e-19
 Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
 Frame = -2

Query: 657 VVEVVRRGKW--PSSKSTNTEI--QACXXXXXXXXXXXXXXXVWFNAR-----RFTVKSM 505
           VVE  R G W  P+++S N+++   A                +W NA       F+ +  
Sbjct: 55  VVEASRNGDWFLPAARSDNSQLFLAALTMAPVPHESRGQDSFLWRNAAGSYLPSFSSRDT 114

Query: 504 WQQIRYVRGNSLWHKLVWFKGNVPKFGFTAWLLCKRRLPTRDRLQAWGIVDDNSCVLCGE 325
           W+QIR       W K+VWFK  +P+F    W+    RLPTRDRL+ WG+   +S VLC  
Sbjct: 115 WEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSN 174

Query: 324 QEDIH-HLFFSCQFS 283
            ++ H HLFF C FS
Sbjct: 175 GDETHAHLFFECSFS 189



 Score = 32.7 bits (73), Expect(3) = 2e-19
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 236 PPLNWRDELQWLLGVALGNSFKTRLRKLTSTCVVYNIWKERNDCIYNN 93
           PP        W+L + L  S  T + KL     VY++WKERN  I+ +
Sbjct: 204 PPFGLPAASSWILQLPL-RSHSTTILKLLLQSAVYHVWKERNARIFTS 250



 Score = 23.9 bits (50), Expect(3) = 2e-19
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -3

Query: 794 ILKMRPLIVS----KVGDGQHTSFLFDNWYPMGIL 702
           +++++P IV      +G+G+  SF +D W   G L
Sbjct: 1   MIQLKPSIVEFMRCDMGNGESASFWYDAWTDFGQL 35


>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 71.2 bits (173), Expect(2) = 7e-18
 Identities = 36/80 (45%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -2

Query: 522 FTVKSMWQQIRYVRGNSLWHKLVWFKGNVPKFGFTAWLLCKRRLPTRDRLQAWGIVDDNS 343
           F++ S W+ IR       W  L+W  GN+PK  F AWL  + RL TR RL  W      S
Sbjct: 108 FSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLGTRGRLSRWDRSIPLS 167

Query: 342 CVLC-GEQEDIHHLFFSCQF 286
           C+LC G  E   HLFFSC F
Sbjct: 168 CLLCGGNYESRDHLFFSCHF 187



 Score = 46.6 bits (109), Expect(2) = 7e-18
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -3

Query: 275 IWRTLLMYLKDFHPPLNWRDELQWLLGVALGNSFKTRLRKLTSTCVVYNIWKERNDCIYN 96
           IW  +L+     H    W  EL W+    +G S + +L +L     +Y IW+ERN  ++ 
Sbjct: 191 IWSRILLLKSSSHRTGYWGVELSWIYNQGIGKSVRRKLWRLLWCATIYFIWQERNHRLHG 250

Query: 95  NHHSEPDIIYIFYKS 51
               EP +++   +S
Sbjct: 251 GSIREPLVVFQLIRS 265


>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 289

 Score = 72.4 bits (176), Expect(2) = 3e-17
 Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = -2

Query: 522 FTVKSMWQQIRYVRGNSLWHKLVWFKGNVPKFGFTAWLLCKRRLPTRDRLQAWGIVDDNS 343
           F+    W  IR       W K VWFKG VPK  F  W+    RLPTR RL +WG +    
Sbjct: 109 FSSARTWDAIRPRAPELDWAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFD 168

Query: 342 CVLCG-EQEDIHHLFFSCQFSSR 277
           C LC  E E   HL FSC+F+++
Sbjct: 169 CCLCTIETESRDHLLFSCEFAAQ 191



 Score = 43.5 bits (101), Expect(2) = 3e-17
 Identities = 18/54 (33%), Positives = 35/54 (64%)
 Frame = -3

Query: 227 NWRDELQWLLGVALGNSFKTRLRKLTSTCVVYNIWKERNDCIYNNHHSEPDIIY 66
           +W + L W+   +  +S  + LRK+++  ++YNIW++RN+ ++NN    P II+
Sbjct: 209 SWAELLSWMRSSS--SSAPSLLRKVSAHAIIYNIWRQRNNVLHNNLRIAPIIIF 260