BLASTX nr result
ID: Lithospermum22_contig00013669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00013669
(3321 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1368 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1367 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1364 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1363 0.0
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 1362 0.0
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1368 bits (3540), Expect = 0.0
Identities = 678/882 (76%), Positives = 746/882 (84%), Gaps = 2/882 (0%)
Frame = -1
Query: 3315 DESSEIQELLEEVNKE--ALKAVKESNFRGKKQPMKTIGGMGLGKYNILRKRQIKMETEA 3142
++ EIQEL+EE++KE ALKA + KQP KTIGGMG+GKYN LR+RQIK+ETEA
Sbjct: 127 EDIDEIQELIEEMDKENEALKANLQP-----KQP-KTIGGMGVGKYNFLRRRQIKVETEA 180
Query: 3141 WEAAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIGAEQDLCKEGKNRNAYAP 2962
WE AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAI AEQ LC EGKNR AYAP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 240
Query: 2961 FFDQLPADMMAVIXXXXXXXXXXXXXXXGSARVVQAACSIGEAIEHEARIYHFLXXXXXX 2782
FFDQLPA+MMAVI GSARVVQAA IGEAIEHEARI+ FL
Sbjct: 241 FFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKS 300
Query: 2781 XXXXXXXXXEPDPAEIQEAKVRKKVTMLMKKQKVHQVRKIVEHHDDVKPWGQDAQVKVGC 2602
P + ++RKKV +LMKKQK+ QVRKIV+ DD KPWGQD VKVGC
Sbjct: 301 NALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2601 RLIQILIETAYIQPPLDQIGDGPPDIRPAFMHTLRTVETPRGNRRYGIIECDPLVRKGLE 2422
RLIQIL+ETAYIQPP DQ+ DGPPDIRPAF+HTL+TVET +G+RRYG+I+CDPLVRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2421 KTARHMVIPYMPMLVPPQNWTGYDKGAYLFLRSYIMRTHGAKQQREAVKMVQKNQLEPVF 2242
KTARHMVIPYMPMLVPPQ+W GYDKG YLFL SYIMRTHGAKQQREAVK V K QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 2241 QALNTLGGTKWRINTKILSVIGRIWASGGGVAXXXXXXXXXXXXXXXXXXXXEIRXXXXX 2062
QAL+TLG TKWR+N K+L ++ RIWASGG +A EIR
Sbjct: 481 QALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWK 540
Query: 2061 XXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDL 1882
KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1881 CRGILEFAEGRLLGKSGLRWLKIHLANIYASGVDKLSYEGRIAFTEGHLDDIFDSADRPL 1702
CRGILEFAEGR LG SGLRWLKIHLAN+Y GVDKLSYEGR+AF+E HL+DIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPL 660
Query: 1701 DGRRWWLKAEDPFQCLATCFNLTEALRSPSPETTLSHIPIHQDGSCNGLQHYAALGRDKL 1522
+G+RWWL AEDPFQCLATC N+ EALRSPSPET +S++PIHQDGSCNGLQHYAALGRDKL
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKL 720
Query: 1521 GAVAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPADEPNALTAKRLLSQVDRKLVKQT 1342
GA AVNLVAG+KPADVYSGIAARVLDIM+RDA KDPA++PN + A+ L++QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 1341 VMTSVYGVTYIGARDQIKRRLKERSAIDDEAELFSAACYTAKTTLTALGEMFEAARDIMN 1162
VMTSVYGVTYIGARDQIK+RLKER I+D+ ELF+AACY AKTTLTALGEMFEAAR IM+
Sbjct: 781 VMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 1161 WLGECAKVISMENQPVRWTTPLGLPVVQPYRKLGRHAIKTSLQVLTLQRETDKVMVKRQR 982
WLG+CAK+I+MEN PVRWTTPLGLPVVQPYRKLGRH IKTSLQ+LTLQRETDKVMVKRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 981 TAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYE 802
TAFPPNFVHSLDGSHMMMTAIACKE+GLSFAGVHDSYWTHACDVDQMN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYD 960
Query: 801 APVLENLLESFQQSFPKLKFPPLPERGDFDLKEVAESPYFFN 676
AP+LENLLESFQQSFP L+FPPLPERGDFDL+EV ESPYFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1367 bits (3539), Expect = 0.0
Identities = 678/882 (76%), Positives = 746/882 (84%), Gaps = 2/882 (0%)
Frame = -1
Query: 3315 DESSEIQELLEEVNKE--ALKAVKESNFRGKKQPMKTIGGMGLGKYNILRKRQIKMETEA 3142
++ EIQEL+EE++KE ALKA + KQP KTIGGMG+GKYN LR+RQIK+ETEA
Sbjct: 127 EDIDEIQELIEEMDKENEALKANLQP-----KQP-KTIGGMGVGKYNFLRRRQIKVETEA 180
Query: 3141 WEAAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIGAEQDLCKEGKNRNAYAP 2962
WE AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAI AEQ LC EGKNR AYAP
Sbjct: 181 WEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAP 240
Query: 2961 FFDQLPADMMAVIXXXXXXXXXXXXXXXGSARVVQAACSIGEAIEHEARIYHFLXXXXXX 2782
FFDQLPA+MMAVI GSARVVQAA IGEAIEHEARI+ FL
Sbjct: 241 FFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKS 300
Query: 2781 XXXXXXXXXEPDPAEIQEAKVRKKVTMLMKKQKVHQVRKIVEHHDDVKPWGQDAQVKVGC 2602
P + ++RKKV +LMKKQK+ QVRKIV+ DD KPWGQD VKVGC
Sbjct: 301 NALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGC 360
Query: 2601 RLIQILIETAYIQPPLDQIGDGPPDIRPAFMHTLRTVETPRGNRRYGIIECDPLVRKGLE 2422
RLIQIL+ETAYIQPP DQ+ DGPPDIRPAF+HTL+TVET +G+RRYG+I+CDPLVRKGL+
Sbjct: 361 RLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLD 420
Query: 2421 KTARHMVIPYMPMLVPPQNWTGYDKGAYLFLRSYIMRTHGAKQQREAVKMVQKNQLEPVF 2242
KTARHMVIPYMPMLVPPQ+W GYDKG YLFL SYIMRTHGAKQQREAVK V K QLEPVF
Sbjct: 421 KTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVF 480
Query: 2241 QALNTLGGTKWRINTKILSVIGRIWASGGGVAXXXXXXXXXXXXXXXXXXXXEIRXXXXX 2062
QAL+TLG TKWR+N K+L ++ RIWASGG +A EIR
Sbjct: 481 QALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWK 540
Query: 2061 XXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDL 1882
KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDL
Sbjct: 541 VKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDL 600
Query: 1881 CRGILEFAEGRLLGKSGLRWLKIHLANIYASGVDKLSYEGRIAFTEGHLDDIFDSADRPL 1702
CRGILEFAEGR LG SGLRWLKIHLAN+Y GVDKLSYEGR+AF+E HL+DIFDSA+RPL
Sbjct: 601 CRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPL 660
Query: 1701 DGRRWWLKAEDPFQCLATCFNLTEALRSPSPETTLSHIPIHQDGSCNGLQHYAALGRDKL 1522
+G+RWWL AEDPFQCLATC N+ EALRSPSPET +S++PIHQDGSCNGLQHYAALGRDKL
Sbjct: 661 EGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKL 720
Query: 1521 GAVAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPADEPNALTAKRLLSQVDRKLVKQT 1342
GA AVNLVAG+KPADVYSGIAARVLDIM+RDA KDPA++PN + A+ L++QVDRKLVKQT
Sbjct: 721 GAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQT 780
Query: 1341 VMTSVYGVTYIGARDQIKRRLKERSAIDDEAELFSAACYTAKTTLTALGEMFEAARDIMN 1162
VMTSVYGVTYIGARDQIK+RLKER I+D+ ELF+AACY AKTTLTALGEMFEAAR IM+
Sbjct: 781 VMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMS 840
Query: 1161 WLGECAKVISMENQPVRWTTPLGLPVVQPYRKLGRHAIKTSLQVLTLQRETDKVMVKRQR 982
WLG+CAK+I+MEN PVRWTTPLGLPVVQPYRKLGRH IKTSLQ+LTLQRETDKVMVKRQR
Sbjct: 841 WLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQR 900
Query: 981 TAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYE 802
TAFPPNFVHSLDGSHMMMTAIACKE+GLSFAGVHDSYWTHACDVDQMN+ILREKFVELY+
Sbjct: 901 TAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYD 960
Query: 801 APVLENLLESFQQSFPKLKFPPLPERGDFDLKEVAESPYFFN 676
AP+LENLLESFQQSFP L+FPPLPERGDFDL+EV ESPYFFN
Sbjct: 961 APILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1364 bits (3530), Expect = 0.0
Identities = 677/880 (76%), Positives = 748/880 (85%)
Frame = -1
Query: 3315 DESSEIQELLEEVNKEALKAVKESNFRGKKQPMKTIGGMGLGKYNILRKRQIKMETEAWE 3136
++ EIQEL+EE+NKE +A+K +N + KQP KTIGGMG+GKYN+LR+RQIK+ETEAWE
Sbjct: 127 EDIDEIQELIEEMNKEN-EALK-TNLQ-PKQP-KTIGGMGVGKYNLLRRRQIKVETEAWE 182
Query: 3135 AAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIGAEQDLCKEGKNRNAYAPFF 2956
AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAI AEQ LC EGKNR AYAPFF
Sbjct: 183 EAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFF 242
Query: 2955 DQLPADMMAVIXXXXXXXXXXXXXXXGSARVVQAACSIGEAIEHEARIYHFLXXXXXXXX 2776
DQLPA+MMAVI GSARVVQAA IGEAIEHEARI+ FL
Sbjct: 243 DQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNA 302
Query: 2775 XXXXXXXEPDPAEIQEAKVRKKVTMLMKKQKVHQVRKIVEHHDDVKPWGQDAQVKVGCRL 2596
P + +VRKKV +LMKKQK+ QVRKIV+ DD KPWGQD VKVGCRL
Sbjct: 303 LSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRL 362
Query: 2595 IQILIETAYIQPPLDQIGDGPPDIRPAFMHTLRTVETPRGNRRYGIIECDPLVRKGLEKT 2416
IQIL+ETAYIQPP DQ+ D PPDIRPAF+HTL+TVET +G+RRYG+I+CDPLVRKGL+KT
Sbjct: 363 IQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKT 422
Query: 2415 ARHMVIPYMPMLVPPQNWTGYDKGAYLFLRSYIMRTHGAKQQREAVKMVQKNQLEPVFQA 2236
ARHMVIPYMPMLVPPQ+W GYDKGAYLFL SYIMRTHGAKQQREAVK V K QLEPVFQA
Sbjct: 423 ARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQA 482
Query: 2235 LNTLGGTKWRINTKILSVIGRIWASGGGVAXXXXXXXXXXXXXXXXXXXXEIRXXXXXXX 2056
L+TLG TKWR+N K+L ++ RIWASGG +A +IR
Sbjct: 483 LDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWKVK 542
Query: 2055 XXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCR 1876
KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCR
Sbjct: 543 GVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 602
Query: 1875 GILEFAEGRLLGKSGLRWLKIHLANIYASGVDKLSYEGRIAFTEGHLDDIFDSADRPLDG 1696
GILEFAEGR LGKSGLRWLKIHLAN+Y GVDKLSYEGR+AF+E H++DIFDSA+RPL+G
Sbjct: 603 GILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEG 662
Query: 1695 RRWWLKAEDPFQCLATCFNLTEALRSPSPETTLSHIPIHQDGSCNGLQHYAALGRDKLGA 1516
+RWWL AEDPFQCLATC N+ EALRSPSPET +S++PIHQDGSCNGLQHYAALGRD LGA
Sbjct: 663 KRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGA 722
Query: 1515 VAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPADEPNALTAKRLLSQVDRKLVKQTVM 1336
AVNLVAG+KPADVYSGIAARVLDIM+RDA KDPA++PN + A+ L++QVDRKLVKQTVM
Sbjct: 723 AAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVM 782
Query: 1335 TSVYGVTYIGARDQIKRRLKERSAIDDEAELFSAACYTAKTTLTALGEMFEAARDIMNWL 1156
TSVYGVTYIGARDQIKRRLKER I+D+ ELF+AACY AKTTLTALGEMFEAAR IM+WL
Sbjct: 783 TSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWL 842
Query: 1155 GECAKVISMENQPVRWTTPLGLPVVQPYRKLGRHAIKTSLQVLTLQRETDKVMVKRQRTA 976
G+CAK+I+MEN PVRWTTPLGLPVVQPYRKLGRH IKTSLQ+LTLQRETDKVMVKRQRTA
Sbjct: 843 GDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTA 902
Query: 975 FPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYEAP 796
FPPNFVHSLDGSHMMMTAIACKE+GLSFAGVHDSYWTHA DVDQMN+ILREKFVELY+AP
Sbjct: 903 FPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAP 962
Query: 795 VLENLLESFQQSFPKLKFPPLPERGDFDLKEVAESPYFFN 676
+LENLLESFQQSFP L+FPPLPERGDFDL+EV ESPYFFN
Sbjct: 963 ILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1363 bits (3527), Expect = 0.0
Identities = 676/880 (76%), Positives = 748/880 (85%)
Frame = -1
Query: 3315 DESSEIQELLEEVNKEALKAVKESNFRGKKQPMKTIGGMGLGKYNILRKRQIKMETEAWE 3136
++ EIQEL+EE+NKE +A+K +N + KQP KTIGGMG+GKYN+LR+RQIK+ETEAWE
Sbjct: 127 EDIDEIQELIEEMNKEN-EALK-TNLQ-PKQP-KTIGGMGVGKYNLLRRRQIKVETEAWE 182
Query: 3135 AAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIGAEQDLCKEGKNRNAYAPFF 2956
AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAI AEQ LC EGKNR AYAPFF
Sbjct: 183 EAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFF 242
Query: 2955 DQLPADMMAVIXXXXXXXXXXXXXXXGSARVVQAACSIGEAIEHEARIYHFLXXXXXXXX 2776
DQLPA+MMAVI GSARVVQAA IGEAIEHEARI+ FL
Sbjct: 243 DQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNA 302
Query: 2775 XXXXXXXEPDPAEIQEAKVRKKVTMLMKKQKVHQVRKIVEHHDDVKPWGQDAQVKVGCRL 2596
P + ++RKKV +LMKKQK+ QVRKIV+ DD KPWGQD VKVGCRL
Sbjct: 303 LSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRL 362
Query: 2595 IQILIETAYIQPPLDQIGDGPPDIRPAFMHTLRTVETPRGNRRYGIIECDPLVRKGLEKT 2416
IQIL+ETAYIQPP DQ+ D PPDIRPAF+HTL+TVET +G+RRYG+I+CDPLVRKGL+KT
Sbjct: 363 IQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKT 422
Query: 2415 ARHMVIPYMPMLVPPQNWTGYDKGAYLFLRSYIMRTHGAKQQREAVKMVQKNQLEPVFQA 2236
ARHMVIPYMPMLVPPQ+W GYDKGAYLFL SYIMRTHGAKQQREAVK V K QLEPVFQA
Sbjct: 423 ARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQA 482
Query: 2235 LNTLGGTKWRINTKILSVIGRIWASGGGVAXXXXXXXXXXXXXXXXXXXXEIRXXXXXXX 2056
L+TLG TKWR+N K+L ++ RIWASGG +A +IR
Sbjct: 483 LDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWKVK 542
Query: 2055 XXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCR 1876
KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCR
Sbjct: 543 GVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 602
Query: 1875 GILEFAEGRLLGKSGLRWLKIHLANIYASGVDKLSYEGRIAFTEGHLDDIFDSADRPLDG 1696
GILEFAEGR LGKSGLRWLKIHLAN+Y GVDKLSYEGR+AF+E H++DIFDSA+RPL+G
Sbjct: 603 GILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEG 662
Query: 1695 RRWWLKAEDPFQCLATCFNLTEALRSPSPETTLSHIPIHQDGSCNGLQHYAALGRDKLGA 1516
+RWWL AEDPFQCLATC N+ EALRSPSPET +S++PIHQDGSCNGLQHYAALGRD LGA
Sbjct: 663 KRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGA 722
Query: 1515 VAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPADEPNALTAKRLLSQVDRKLVKQTVM 1336
AVNLVAG+KPADVYSGIAARVLDIM+RDA KDPA++PN + A+ L++QVDRKLVKQTVM
Sbjct: 723 AAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVM 782
Query: 1335 TSVYGVTYIGARDQIKRRLKERSAIDDEAELFSAACYTAKTTLTALGEMFEAARDIMNWL 1156
TSVYGVTYIGARDQIKRRLKER I+D+ ELF+AACY AKTTLTALGEMFEAAR IM+WL
Sbjct: 783 TSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWL 842
Query: 1155 GECAKVISMENQPVRWTTPLGLPVVQPYRKLGRHAIKTSLQVLTLQRETDKVMVKRQRTA 976
G+CAK+I+MEN PVRWTTPLGLPVVQPYRKLGRH IKTSLQ+LTLQRETDKVMVKRQRTA
Sbjct: 843 GDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTA 902
Query: 975 FPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYEAP 796
FPPNFVHSLDGSHMMMTAIACKE+GLSFAGVHDSYWTHA DVDQMN+ILREKFVELY+AP
Sbjct: 903 FPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAP 962
Query: 795 VLENLLESFQQSFPKLKFPPLPERGDFDLKEVAESPYFFN 676
+LENLLESFQQSFP L+FPPLPERGDFDL+EV ESPYFFN
Sbjct: 963 ILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 1362 bits (3524), Expect = 0.0
Identities = 676/880 (76%), Positives = 748/880 (85%)
Frame = -1
Query: 3315 DESSEIQELLEEVNKEALKAVKESNFRGKKQPMKTIGGMGLGKYNILRKRQIKMETEAWE 3136
+++ EIQEL+EE+NKE +A+K +N + KQP KTIGGMG+GKYN+LR+RQIK+ETEAWE
Sbjct: 127 EDTDEIQELIEEMNKEN-EALK-TNLQ-PKQP-KTIGGMGVGKYNLLRRRQIKVETEAWE 182
Query: 3135 AAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIGAEQDLCKEGKNRNAYAPFF 2956
AAKEYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAI AEQ LC EGKNR A APFF
Sbjct: 183 EAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGACAPFF 242
Query: 2955 DQLPADMMAVIXXXXXXXXXXXXXXXGSARVVQAACSIGEAIEHEARIYHFLXXXXXXXX 2776
DQLPA+MMAVI GSARVVQAA IGEAIEHEARI+ FL
Sbjct: 243 DQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNA 302
Query: 2775 XXXXXXXEPDPAEIQEAKVRKKVTMLMKKQKVHQVRKIVEHHDDVKPWGQDAQVKVGCRL 2596
P + +VRKKV +LMKKQK+ QVRKIV+ DD KPWGQD VKVGCRL
Sbjct: 303 LSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRL 362
Query: 2595 IQILIETAYIQPPLDQIGDGPPDIRPAFMHTLRTVETPRGNRRYGIIECDPLVRKGLEKT 2416
IQIL+ETAYIQPP DQ+ D PPDIRPAF+HTL+TVET +G+RRYG+I+CDPLVRKGL+KT
Sbjct: 363 IQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKT 422
Query: 2415 ARHMVIPYMPMLVPPQNWTGYDKGAYLFLRSYIMRTHGAKQQREAVKMVQKNQLEPVFQA 2236
ARHMVIPYMPMLVPPQ+W GYDKGAYLFL SYIMRTHGAKQQREAVK V K QLEPVFQA
Sbjct: 423 ARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQA 482
Query: 2235 LNTLGGTKWRINTKILSVIGRIWASGGGVAXXXXXXXXXXXXXXXXXXXXEIRXXXXXXX 2056
L+TLG TKWR+N K+L ++ RIWASGG +A +IR
Sbjct: 483 LDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWKVK 542
Query: 2055 XXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCR 1876
KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHP+LNHLGSDLCR
Sbjct: 543 GVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCR 602
Query: 1875 GILEFAEGRLLGKSGLRWLKIHLANIYASGVDKLSYEGRIAFTEGHLDDIFDSADRPLDG 1696
GILEFAEGR LGKSGLRWLKIHLAN+Y GVDKLSYEGR+AF+E H++DIFDSA+RPL+G
Sbjct: 603 GILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEG 662
Query: 1695 RRWWLKAEDPFQCLATCFNLTEALRSPSPETTLSHIPIHQDGSCNGLQHYAALGRDKLGA 1516
+RWWL AEDPFQCLATC N+ EALRSPSPET +S++PIHQDGSCNGLQHYAALGRD LGA
Sbjct: 663 KRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGA 722
Query: 1515 VAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPADEPNALTAKRLLSQVDRKLVKQTVM 1336
AVNLVAG+KPADVYSGIAARVLDIM+RDA KDPA++PN + A+ L++QVDRKLVKQTVM
Sbjct: 723 AAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVM 782
Query: 1335 TSVYGVTYIGARDQIKRRLKERSAIDDEAELFSAACYTAKTTLTALGEMFEAARDIMNWL 1156
TSVYGVTYIGARDQIKRRLKER I+D+ ELF+AACY AKTTLTALGEMFEAAR IM+WL
Sbjct: 783 TSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWL 842
Query: 1155 GECAKVISMENQPVRWTTPLGLPVVQPYRKLGRHAIKTSLQVLTLQRETDKVMVKRQRTA 976
G+CAK+I+MEN PVRWTTPLGLPVVQPYRKLGRH IKTSLQ+LTLQRETDKVMVKRQRTA
Sbjct: 843 GDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTA 902
Query: 975 FPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYEAP 796
FPPNFVHSLDGSHMMMTAIACKE+GLSFAGVHDSYWTHA DVDQMN+ILREKFVELY+AP
Sbjct: 903 FPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAP 962
Query: 795 VLENLLESFQQSFPKLKFPPLPERGDFDLKEVAESPYFFN 676
+LENLLESFQQSFP L+FPPLPERGDFDL+EV ESPYFFN
Sbjct: 963 ILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002