BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013658
         (1935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|2...   684   0.0  
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   680   0.0  
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   672   0.0  
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   668   0.0  
ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chlor...   652   0.0  

>ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|222847890|gb|EEE85437.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  684 bits (1765), Expect = 0.0
 Identities = 318/423 (75%), Positives = 366/423 (86%)
 Frame = +1

Query: 253  LSKRCFSCESVAVSELNSPYCTSTSNGSLNYTRLMPCPSENGPPRVEHLVVKEEGPVLDY 432
            LSK+  SCES+   ++     TS+ NG   YTRL+PCPS N PPR+EHLVV EEGPVLDY
Sbjct: 45   LSKKKLSCESLK-QDIACTTATSSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDY 103

Query: 433  ICKSLDLPPLFVADLIHFGAVYYALVCPKPPPSATKEEIEAYEEFTAPSVLKKRGSIKGK 612
            ICK+LDLPPLFVADLIHFGAV+YALVCP+PP +AT E+I  +EE TAPSVLKKR SIKGK
Sbjct: 104  ICKALDLPPLFVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGK 163

Query: 613  TVREAQKTFRITHPDEILEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLNKPAG 792
            TVREAQKTFRITH D+ LE G YLRVHVHPKRFPRCY+IDWKSRII VTES+VVL+KPAG
Sbjct: 164  TVREAQKTFRITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAG 223

Query: 793  TSVGGTTDNIEESCATFATRALGLAEPLRTTHQIDNCTEGCVVLSRTKEYCSVFHGKIRE 972
            TSVGGTTDNIEESCATFATRALGL  PLRTTHQIDNCTEGCVVL+RT+E CSVFHGKIRE
Sbjct: 224  TSVGGTTDNIEESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIRE 283

Query: 973  KKVTKRYLALAAALLPTGIITHYMRPINMAPRLVCEDYVKGWYLCQLEITECNRIPWPKR 1152
            K V K Y+ALAA+ +P G++ HYMRPINMAPRLV E+++KGW+LCQLE+ EC R+PWP  
Sbjct: 284  KTVKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDA 343

Query: 1153 KIEETYGIEDCGWPSRDFAYECKINLVTGRTHQIRAQLAACGAPLVGDSMYMPAAIANMV 1332
             +EE Y ++DCGWPS+D AYECKINL+TGRTHQIRAQLAA GAPLVGDSMYMPAA+A MV
Sbjct: 344  VMEEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMV 403

Query: 1333 NPGVNPFVKAEMTYPTENDEALAIQEWISLHGKEPSVAIGLQACQISWDDGEHLYKAGSP 1512
            +PG NPF K +  Y +E+D+A+A++EW+  HGKEP+VAIGLQACQISWDDG+H+Y AGSP
Sbjct: 404  SPGCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSP 463

Query: 1513 WWR 1521
            WWR
Sbjct: 464  WWR 466


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  680 bits (1754), Expect = 0.0
 Identities = 317/423 (74%), Positives = 366/423 (86%), Gaps = 2/423 (0%)
 Frame = +1

Query: 259  KRCFSCESVAVSELNSPYCTSTS--NGSLNYTRLMPCPSENGPPRVEHLVVKEEGPVLDY 432
            +R F CES   S+    Y T+TS  NG+ +Y RL+PCPS N PPR+EHLVV EEGPVLDY
Sbjct: 53   ERKFCCES---SKPEVAYTTNTSCVNGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDY 109

Query: 433  ICKSLDLPPLFVADLIHFGAVYYALVCPKPPPSATKEEIEAYEEFTAPSVLKKRGSIKGK 612
            ICK+LDLPPLFVADLI FGAV+YALVCP+PP +AT E+I  +E+FTAPSVLKKR SIKGK
Sbjct: 110  ICKALDLPPLFVADLIDFGAVHYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGK 169

Query: 613  TVREAQKTFRITHPDEILEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLNKPAG 792
            TVREAQKTFRITH D+ LE GTYLRVHVHPKRFPRCY+IDWKSRIIAVT+ YVVL+KPAG
Sbjct: 170  TVREAQKTFRITHVDQYLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAG 229

Query: 793  TSVGGTTDNIEESCATFATRALGLAEPLRTTHQIDNCTEGCVVLSRTKEYCSVFHGKIRE 972
            TSVGGT DNIEESCATFATRALGL  PL+TTHQIDNCTEGCVVL+R+KEYCSVFHGKIRE
Sbjct: 230  TSVGGTADNIEESCATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIRE 289

Query: 973  KKVTKRYLALAAALLPTGIITHYMRPINMAPRLVCEDYVKGWYLCQLEITECNRIPWPKR 1152
            KKV K YLALAA+ +P G+I +YMRP+N+APRL+ E++V GW+LCQLE+ EC ++PWP  
Sbjct: 290  KKVKKLYLALAASPVPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDA 349

Query: 1153 KIEETYGIEDCGWPSRDFAYECKINLVTGRTHQIRAQLAACGAPLVGDSMYMPAAIANMV 1332
             IEE Y +EDCGWPS+DFAYECKINL+TGRTHQIRAQLAA GAPLVGDSMYMPAA+A M 
Sbjct: 350  AIEEKYSVEDCGWPSKDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMA 409

Query: 1333 NPGVNPFVKAEMTYPTENDEALAIQEWISLHGKEPSVAIGLQACQISWDDGEHLYKAGSP 1512
            NPG+NPF K    Y  E+DE++A+ EW++ HGKEP VAIGLQAC+ISWD+G+H+YKAGSP
Sbjct: 410  NPGLNPFGKHRKQYTNESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSP 469

Query: 1513 WWR 1521
            WWR
Sbjct: 470  WWR 472


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  672 bits (1733), Expect = 0.0
 Identities = 314/401 (78%), Positives = 350/401 (87%)
 Frame = +1

Query: 316  TSTSNGSLNYTRLMPCPSENGPPRVEHLVVKEEGPVLDYICKSLDLPPLFVADLIHFGAV 495
            TS+ NG   Y RL+PCPS+NGPPRVEHLVV E G VLDYI K+LDLPPLFVADLIHFGAV
Sbjct: 71   TSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAV 130

Query: 496  YYALVCPKPPPSATKEEIEAYEEFTAPSVLKKRGSIKGKTVREAQKTFRITHPDEILEVG 675
            YYALVCP+PPPSAT E++  ++E TAPSVL+KR SIKGKT+REAQKTFRIT  +E +E G
Sbjct: 131  YYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAG 190

Query: 676  TYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLNKPAGTSVGGTTDNIEESCATFATRA 855
            TYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVL+KPAGTSVGGTTDNIEESCATFATRA
Sbjct: 191  TYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRA 250

Query: 856  LGLAEPLRTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVTKRYLALAAALLPTGIIT 1035
            LGL  PLRTTHQIDNCTEGCVVL+RTKEYCSVFHGKIREKKV K Y ALAAA +P GI+T
Sbjct: 251  LGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVT 310

Query: 1036 HYMRPINMAPRLVCEDYVKGWYLCQLEITECNRIPWPKRKIEETYGIEDCGWPSRDFAYE 1215
            HYMRP+N+APRL+ ED++KGWYLCQLE+ EC  +PWP   IEE Y IED GWP ++ A++
Sbjct: 311  HYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFK 370

Query: 1216 CKINLVTGRTHQIRAQLAACGAPLVGDSMYMPAAIANMVNPGVNPFVKAEMTYPTENDEA 1395
            CKINL+TGRTHQIRAQLAACGAP+VGDSMYMPAAIA + +PG+NPF K +  Y TEND  
Sbjct: 371  CKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRE 430

Query: 1396 LAIQEWISLHGKEPSVAIGLQACQISWDDGEHLYKAGSPWW 1518
             A+ EWI+ HGKEP VAIGLQACQISWDDGEH YKAGSPWW
Sbjct: 431  TAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  668 bits (1724), Expect = 0.0
 Identities = 306/395 (77%), Positives = 347/395 (87%)
 Frame = +1

Query: 337  LNYTRLMPCPSENGPPRVEHLVVKEEGPVLDYICKSLDLPPLFVADLIHFGAVYYALVCP 516
            + Y RL+PCPS+N PPRVEHLVV EEGPVLDYICK+LDLPPLFVADLIHFGAV+YALVCP
Sbjct: 1    MGYDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCP 60

Query: 517  KPPPSATKEEIEAYEEFTAPSVLKKRGSIKGKTVREAQKTFRITHPDEILEVGTYLRVHV 696
            +PPP+AT E+I  +EEFTAPSVLKKR SIKGKTVREAQKTFR++   + LEVGTYLRV+V
Sbjct: 61   QPPPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYV 120

Query: 697  HPKRFPRCYEIDWKSRIIAVTESYVVLNKPAGTSVGGTTDNIEESCATFATRALGLAEPL 876
            HP+RFPRCYEIDWKSRIIAVTESYVVL+KPAGTSVGGTT+NIEE+CATFATRALGL  PL
Sbjct: 121  HPRRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPL 180

Query: 877  RTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVTKRYLALAAALLPTGIITHYMRPIN 1056
            +TTHQIDNCTEGCVVL+RT EYC VFHGKIRE KV K YLALAA  +P G+ITHYMRP N
Sbjct: 181  KTTHQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGN 240

Query: 1057 MAPRLVCEDYVKGWYLCQLEITECNRIPWPKRKIEETYGIEDCGWPSRDFAYECKINLVT 1236
            + PRLV E++++GWYLCQLE+ EC ++PWP    EE Y +EDCGWPS+DFAYECKINL+T
Sbjct: 241  IPPRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLT 300

Query: 1237 GRTHQIRAQLAACGAPLVGDSMYMPAAIANMVNPGVNPFVKAEMTYPTENDEALAIQEWI 1416
            GRTHQIRAQLAACGAPLVGDSMYMPAAIA M NPGVNPF K +  Y  ENDE++ + EW+
Sbjct: 301  GRTHQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWV 360

Query: 1417 SLHGKEPSVAIGLQACQISWDDGEHLYKAGSPWWR 1521
              HGKEPS+AIGLQAC+ISW D +H+YKAG PWWR
Sbjct: 361  ERHGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
            max]
          Length = 473

 Score =  652 bits (1681), Expect = 0.0
 Identities = 300/402 (74%), Positives = 348/402 (86%)
 Frame = +1

Query: 316  TSTSNGSLNYTRLMPCPSENGPPRVEHLVVKEEGPVLDYICKSLDLPPLFVADLIHFGAV 495
            TS+S+    Y RL+PCPS   PPR+EHLVV E GPVL++ICK+LDLPPL+V+DLI FGAV
Sbjct: 71   TSSSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVSDLIQFGAV 130

Query: 496  YYALVCPKPPPSATKEEIEAYEEFTAPSVLKKRGSIKGKTVREAQKTFRITHPDEILEVG 675
            YYALVCP+PPP+AT+E+I  ++E T PSVL+KR SIKGKTVREAQKTFR+TH D+ +E G
Sbjct: 131  YYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPG 190

Query: 676  TYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLNKPAGTSVGGTTDNIEESCATFATRA 855
            TYLRVHVHPKR PRCYEIDW+SRII V ESYVVL+KPAGTSVGGTTDNIEESCATFATRA
Sbjct: 191  TYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRA 250

Query: 856  LGLAEPLRTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVTKRYLALAAALLPTGIIT 1035
            LG+  PL TTHQIDNCTEGCVVL+RTKEYCSVFHGKIREKKV K YLALAA  LPTGIIT
Sbjct: 251  LGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIIT 310

Query: 1036 HYMRPINMAPRLVCEDYVKGWYLCQLEITECNRIPWPKRKIEETYGIEDCGWPSRDFAYE 1215
            HYMRPI+MAPRL+ ED++KGW+LCQLE+ EC ++PWP   I++ Y IEDCGWPS+D+AYE
Sbjct: 311  HYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYE 370

Query: 1216 CKINLVTGRTHQIRAQLAACGAPLVGDSMYMPAAIANMVNPGVNPFVKAEMTYPTENDEA 1395
            CKINL+TG+THQIRAQ AA  APL+GDSMYMPAAIANM NPG+NPF K +  + +E+++ 
Sbjct: 371  CKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKE 430

Query: 1396 LAIQEWISLHGKEPSVAIGLQACQISWDDGEHLYKAGSPWWR 1521
             A+  WI+ HGKEPSVAIGLQACQISWDD EH Y+A SPWWR
Sbjct: 431  TAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 472