BLASTX nr result

ID: Lithospermum22_contig00013646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013646
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145965.1| PREDICTED: RING-H2 finger protein ATL79-like...   115   8e-24
ref|XP_004162971.1| PREDICTED: RING-H2 finger protein ATL79-like...   115   1e-23
ref|XP_002300529.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_002870115.1| zinc finger family protein [Arabidopsis lyra...   113   4e-23
ref|XP_002518964.1| RING-H2 finger protein ATL5M precursor, puta...   112   9e-23

>ref|XP_004145965.1| PREDICTED: RING-H2 finger protein ATL79-like [Cucumis sativus]
          Length = 182

 Score =  115 bits (289), Expect = 8e-24
 Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
 Frame = +1

Query: 136 EARTCPWWPYSSSLNFKTNXXXXXXXXXXXXXXXXXXHAGIRYIIRQCRRSPEEDIEATG 315
           + R C W PYSSS +F+ N                  +  IR  +R+   S ++  ++  
Sbjct: 24  DLRACTWRPYSSSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDSSDSRQ 83

Query: 316 AEEQKQSSFGNLDKLELIPTMVFSPGMR--LGGTEAVECTICLTEFVEGDVIRVMERCSH 489
            E  +++    +DKL++ P +VFS  M+  L G EA ECTICLTEF EG+ IRV+  C H
Sbjct: 84  EELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEA-ECTICLTEFSEGEEIRVLSICKH 142

Query: 490 GFHVQCIQQWLFSHFNCPTCR 552
           GFHVQCIQ WL SH +CPTCR
Sbjct: 143 GFHVQCIQTWLISHSSCPTCR 163


>ref|XP_004162971.1| PREDICTED: RING-H2 finger protein ATL79-like [Cucumis sativus]
          Length = 182

 Score =  115 bits (287), Expect = 1e-23
 Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
 Frame = +1

Query: 136 EARTCPWWPYSSSLNFKTNXXXXXXXXXXXXXXXXXXHAGIRYIIRQCRRSPEEDIEATG 315
           + R C W PYSSS +F+ N                  +  IR  +R+   S ++  ++  
Sbjct: 24  DLRACTWRPYSSSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGTSDDDSSDSRQ 83

Query: 316 AEEQKQSSFGNLDKLELIPTMVFSPGMR--LGGTEAVECTICLTEFVEGDVIRVMERCSH 489
            E  +++    +DKL++ P +VFS  M+  L G EA ECTICLTEF EG+ IRV+  C H
Sbjct: 84  EELPEETKPTLVDKLKMAPALVFSAEMKPKLAGAEA-ECTICLTEFSEGEEIRVLAICKH 142

Query: 490 GFHVQCIQQWLFSHFNCPTCR 552
           GFHVQCIQ WL SH +CPTCR
Sbjct: 143 GFHVQCIQTWLISHSSCPTCR 163


>ref|XP_002300529.1| predicted protein [Populus trichocarpa] gi|222847787|gb|EEE85334.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  115 bits (287), Expect = 1e-23
 Identities = 56/139 (40%), Positives = 79/139 (56%)
 Frame = +1

Query: 136 EARTCPWWPYSSSLNFKTNXXXXXXXXXXXXXXXXXXHAGIRYIIRQCRRSPEEDIEATG 315
           +  +C WWPYS+S +F  N                  +  IR+ +R    +  + +    
Sbjct: 12  QVHSCKWWPYSNSNDFGANTAMILIILLCALICALVLNTAIRWFLRSNNNNSSDRLGEL- 70

Query: 316 AEEQKQSSFGNLDKLELIPTMVFSPGMRLGGTEAVECTICLTEFVEGDVIRVMERCSHGF 495
            E++K     ++  L L  T V+S GM+LGG EA +C ICL+EFVEG+ IRV+ RC HGF
Sbjct: 71  EEQRKPKDEADMATLVLATTQVYSAGMKLGGVEA-DCAICLSEFVEGEGIRVLGRCDHGF 129

Query: 496 HVQCIQQWLFSHFNCPTCR 552
           HV CI++WL SH +CPTCR
Sbjct: 130 HVLCIEKWLSSHSSCPTCR 148


>ref|XP_002870115.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315951|gb|EFH46374.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score =  113 bits (283), Expect = 4e-23
 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
 Frame = +1

Query: 133 CEARTCPWWPYSSSLNFKTNXXXXXXXXXXXXXXXXXXHAGIRYIIRQCRR---SPEEDI 303
           C +++C W PYS S +F  N                  HA IR  +R   +    P+ D+
Sbjct: 17  CTSQSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQHVPKPDPDL 76

Query: 304 EATGAEEQKQSSFGNLDKLELIPTMVFSPGMRLGGTEAVECTICLTEFVEGDVIRVMERC 483
           EAT  +                PT+V+SPG+ L G EA EC ICL+EF +GD +RV+ERC
Sbjct: 77  EATHPDAA--------------PTLVYSPGLNLAGNEA-ECIICLSEFQDGDTLRVLERC 121

Query: 484 SHGFHVQCIQQWL-FSHFNCPTCR 552
            HGFHV CIQQWL  SH +CPTCR
Sbjct: 122 KHGFHVHCIQQWLSSSHSSCPTCR 145


>ref|XP_002518964.1| RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
           gi|223541951|gb|EEF43497.1| RING-H2 finger protein ATL5M
           precursor, putative [Ricinus communis]
          Length = 205

 Score =  112 bits (280), Expect = 9e-23
 Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
 Frame = +1

Query: 139 ARTCPWWPYSSSLNFKTNXXXXXXXXXXXXXXXXXXHAGIRYIIRQCRRSPEE--DIEAT 312
           A  C WWPYS S +F  N                  +  IR  +R     P+     +  
Sbjct: 26  AHGCRWWPYSKSNDFGANTAMILIILLCALICALVLNTAIRCFLRSAAHPPDRLPQTQRE 85

Query: 313 GAEEQKQSSFGNLDKLELIPTMVFSPGMRLGGTEAVECTICLTEFVEGDVIRVMERCSHG 492
             + +K ++  +   L + PT+V+S GM+LGG EA +C ICL+EFVEG+ IRV+  C HG
Sbjct: 86  LDDHRKPNTEASASPLVVAPTVVYSAGMKLGGAEA-DCAICLSEFVEGEGIRVLGSCKHG 144

Query: 493 FHVQCIQQWLFSHFNCPTCR 552
           FHV CI+QWL  H +CPTCR
Sbjct: 145 FHVHCIEQWLSCHPSCPTCR 164


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