BLASTX nr result

ID: Lithospermum22_contig00013634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013634
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]              244   1e-62
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   244   1e-62
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   239   3e-61
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...   236   3e-60

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  244 bits (622), Expect = 1e-62
 Identities = 118/174 (67%), Positives = 138/174 (79%)
 Frame = -1

Query: 685  PQNDGAYVLLSNIYAKLGNWDKVSLLRKAMKDSGIKKEPGCSSIEVNGAVHEFLAGDNTH 506
            P N GAYVLLSNIYAK G WD+VS LRK M+D G+KKEPGCSSIEV+G VHEFL GDN+H
Sbjct: 479  PGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSH 538

Query: 505  PRAHEIYSKLEEVVNKLKSCGYRPKTSXXXXXXXXXXXXXXXLNSHSEKLAIAFGLISTD 326
            P A +IY+KL+E+V +L++ GY P  S               L  HSEKLAIAFGLIST 
Sbjct: 539  PSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTG 598

Query: 325  SSQPMRIMKNLRVCGDCHSVAKLISRLYGREILLRDRYRFHHFKDGNCSCMDYY 164
             SQP+RI+KNLRVCGDCHSVAKL+S+LY REILLRDRYRFHHF++G+CSCMDY+
Sbjct: 599  QSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 652


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  244 bits (622), Expect = 1e-62
 Identities = 118/174 (67%), Positives = 138/174 (79%)
 Frame = -1

Query: 685  PQNDGAYVLLSNIYAKLGNWDKVSLLRKAMKDSGIKKEPGCSSIEVNGAVHEFLAGDNTH 506
            P N GAYVLLSNIYAK G WD+VS LRK M+D G+KKEPGCSSIEV+G VHEFL GDN+H
Sbjct: 570  PGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSH 629

Query: 505  PRAHEIYSKLEEVVNKLKSCGYRPKTSXXXXXXXXXXXXXXXLNSHSEKLAIAFGLISTD 326
            P A +IY+KL+E+V +L++ GY P  S               L  HSEKLAIAFGLIST 
Sbjct: 630  PSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTG 689

Query: 325  SSQPMRIMKNLRVCGDCHSVAKLISRLYGREILLRDRYRFHHFKDGNCSCMDYY 164
             SQP+RI+KNLRVCGDCHSVAKL+S+LY REILLRDRYRFHHF++G+CSCMDY+
Sbjct: 690  QSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
            gi|449470513|ref|XP_004152961.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
            gi|449523079|ref|XP_004168552.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  239 bits (611), Expect = 3e-61
 Identities = 113/174 (64%), Positives = 134/174 (77%)
 Frame = -1

Query: 685  PQNDGAYVLLSNIYAKLGNWDKVSLLRKAMKDSGIKKEPGCSSIEVNGAVHEFLAGDNTH 506
            P+N GA VLLSNIYAK G W+KVS LRK M+D+ +KKEPGCSSIE NG VHEFL GDNTH
Sbjct: 560  PRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTH 619

Query: 505  PRAHEIYSKLEEVVNKLKSCGYRPKTSXXXXXXXXXXXXXXXLNSHSEKLAIAFGLISTD 326
            P +  IYSKLEE+  KLKS GY P  S               L+ HSEKLAIAFGL++  
Sbjct: 620  PLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLA 679

Query: 325  SSQPMRIMKNLRVCGDCHSVAKLISRLYGREILLRDRYRFHHFKDGNCSCMDYY 164
             SQP+R++KNLR+CGDCH+ AKL+SR+Y R+ILLRDRYRFHHF+DG+CSCMDY+
Sbjct: 680  PSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
            predicted protein [Populus trichocarpa]
          Length = 738

 Score =  236 bits (603), Expect = 2e-60
 Identities = 116/172 (67%), Positives = 133/172 (77%)
 Frame = -1

Query: 679  NDGAYVLLSNIYAKLGNWDKVSLLRKAMKDSGIKKEPGCSSIEVNGAVHEFLAGDNTHPR 500
            N GAYVLLSNIYAK G WD VS LR+ MK SG++KEPGCSSIEVNG +HEFL GDN+HP 
Sbjct: 567  NHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPL 626

Query: 499  AHEIYSKLEEVVNKLKSCGYRPKTSXXXXXXXXXXXXXXXLNSHSEKLAIAFGLISTDSS 320
            + EIYSKL+E+V ++KS GY    S               LN HSEKLAIA+GLI  + S
Sbjct: 627  STEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPS 686

Query: 319  QPMRIMKNLRVCGDCHSVAKLISRLYGREILLRDRYRFHHFKDGNCSCMDYY 164
            QP+RI+KNLRVCGDCHSVAKLIS+LY R+ILLRDRYRFHHF  GNCSCMDY+
Sbjct: 687  QPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Glycine max]
          Length = 780

 Score =  236 bits (602), Expect = 3e-60
 Identities = 112/174 (64%), Positives = 135/174 (77%)
 Frame = -1

Query: 685  PQNDGAYVLLSNIYAKLGNWDKVSLLRKAMKDSGIKKEPGCSSIEVNGAVHEFLAGDNTH 506
            P N GA+VLLSNIYAK G+W+KVS LRK M+DS +KKEP CSSI+VNG VHEFL GDN+H
Sbjct: 607  PCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSH 666

Query: 505  PRAHEIYSKLEEVVNKLKSCGYRPKTSXXXXXXXXXXXXXXXLNSHSEKLAIAFGLISTD 326
            P + +IYSKL+E+  K K  GY+P  S               LN HSEKLAIAFGLIST 
Sbjct: 667  PFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTA 726

Query: 325  SSQPMRIMKNLRVCGDCHSVAKLISRLYGREILLRDRYRFHHFKDGNCSCMDYY 164
            SSQP+RI+KN+R+CGDCH+ AKL+S+LY R+ILLRDRYRFHHF+ G CSC+DY+
Sbjct: 727  SSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780


Top