BLASTX nr result

ID: Lithospermum22_contig00013513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013513
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   274   2e-71
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...   271   2e-70
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...   269   1e-69
ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   268   2e-69
ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|1...   264   3e-68

>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
           gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 309

 Score =  274 bits (701), Expect = 2e-71
 Identities = 153/249 (61%), Positives = 170/249 (68%), Gaps = 1/249 (0%)
 Frame = -3

Query: 995 DTETIFFENPEDPEDFSPFSPIDPPEGFIEPPSFDEGPFXXXXXXXXXXXXXYGSAYSGE 816
           D +T FF+N  +PED   F P  PPE F+ PPSFDE P              YG+ YSG 
Sbjct: 62  DIDTTFFDNL-NPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGYSGV 120

Query: 815 SLLGSDVLEMNAKVKKSIGFG-KGKREKIKDGFDEXXXXXXXXXXXXXXXXQLHFRXXXX 639
           S LG+DV  M++KVKK+ GFG KGKREKI+DGF+E                QLHFR    
Sbjct: 121 SYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRAIVV 180

Query: 638 XXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIISVPMTKYLTFPHRSDGKYGAASVMLR 459
                                VQKSAVNARRNII+VPMTKYLTFPHRSDG YGAA VMLR
Sbjct: 181 VGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKVMLR 240

Query: 458 PAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVAEER 279
           PA+PGTGVIAGGAVRIVLEMAGVENALGKQ+GS NALNNARATVVAVQ+MRQFS+VA ER
Sbjct: 241 PASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVARER 300

Query: 278 GIPMEQLWK 252
           GIPME+LWK
Sbjct: 301 GIPMEELWK 309


>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 300

 Score =  271 bits (694), Expect = 2e-70
 Identities = 149/249 (59%), Positives = 170/249 (68%), Gaps = 1/249 (0%)
 Frame = -3

Query: 995 DTETIFFENPEDPEDFSPFSPIDPPEGFIEPPSFDEGPFXXXXXXXXXXXXXYGSAYSGE 816
           D +T FF+N  +P+D   F+P +PPEGF+ PPSFD+GP              YG  YSG 
Sbjct: 53  DIDTSFFDNI-NPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSGV 111

Query: 815 SLLGSDVLEMNAKVKKSIGFGKG-KREKIKDGFDEXXXXXXXXXXXXXXXXQLHFRXXXX 639
           S+LG+DV  M+AKVKK  GFG G K+EK++DGF+E                QL FR    
Sbjct: 112 SVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVVV 171

Query: 638 XXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIISVPMTKYLTFPHRSDGKYGAASVMLR 459
                                VQKSAVNARRNII VPMTKY TFPHR+DG YGAA VMLR
Sbjct: 172 VGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVMLR 231

Query: 458 PAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVAEER 279
           PA+PGTGVIAGG+VRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ+M+QF EVAEER
Sbjct: 232 PASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEER 291

Query: 278 GIPMEQLWK 252
           GIPME+LWK
Sbjct: 292 GIPMEELWK 300


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 316

 Score =  269 bits (687), Expect = 1e-69
 Identities = 147/249 (59%), Positives = 169/249 (67%), Gaps = 1/249 (0%)
 Frame = -3

Query: 995 DTETIFFENPEDPEDFSPFSPIDPPEGFIEPPSFDEGPFXXXXXXXXXXXXXYGSAYSGE 816
           D +T FF+N  +P+D   F+P +PPEGF+ PPSFD+GP              YG  YSG 
Sbjct: 69  DIDTSFFDNI-NPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSGV 127

Query: 815 SLLGSDVLEMNAKVKKSIGFGKG-KREKIKDGFDEXXXXXXXXXXXXXXXXQLHFRXXXX 639
           S+LG+DV  M+AKVKK  GFG G K+EK++DGF+E                QL FR    
Sbjct: 128 SVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVVV 187

Query: 638 XXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIISVPMTKYLTFPHRSDGKYGAASVMLR 459
                                VQKSAVNARRNII VPMTKY TFPHR+DG YGAA VMLR
Sbjct: 188 VGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVMLR 247

Query: 458 PAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVAEER 279
           PA+PGTGVIAGG+VRIVLEMAGV+NALGKQLGSNNALNNARATV AVQ+M+QF EVAEER
Sbjct: 248 PASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATVAAVQKMKQFREVAEER 307

Query: 278 GIPMEQLWK 252
           GIPME+LWK
Sbjct: 308 GIPMEELWK 316


>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
           sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
           ribosomal protein S5, chloroplastic-like [Cucumis
           sativus]
          Length = 307

 Score =  268 bits (685), Expect = 2e-69
 Identities = 147/249 (59%), Positives = 170/249 (68%), Gaps = 1/249 (0%)
 Frame = -3

Query: 995 DTETIFFENPEDPEDFSPFSPIDPPEGFIEPPSFDEGPFXXXXXXXXXXXXXYGSAYSGE 816
           D +T FF+N    ED   + P + PEGF+ PPSFDEGP              YG AYSG 
Sbjct: 60  DIDTTFFDNVNPQEDIV-YDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGV 118

Query: 815 SLLGSDVLEMNAKVKKSIGFG-KGKREKIKDGFDEXXXXXXXXXXXXXXXXQLHFRXXXX 639
           S+LG+D+  M++KVKK+ GFG K K++K +DGFDE                QLHFR    
Sbjct: 119 SVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVV 178

Query: 638 XXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIISVPMTKYLTFPHRSDGKYGAASVMLR 459
                                VQKSAVNARRNI++VPMTKYLTFPHRS+G YGAA VMLR
Sbjct: 179 VGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLR 238

Query: 458 PAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVAEER 279
           PA+PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ+M+QF +VA+ER
Sbjct: 239 PASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQER 298

Query: 278 GIPMEQLWK 252
           GIPME+LWK
Sbjct: 299 GIPMEELWK 307


>ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|118487850|gb|ABK95748.1|
           unknown [Populus trichocarpa]
           gi|222848093|gb|EEE85640.1| predicted protein [Populus
           trichocarpa]
          Length = 311

 Score =  264 bits (674), Expect = 3e-68
 Identities = 148/249 (59%), Positives = 168/249 (67%), Gaps = 1/249 (0%)
 Frame = -3

Query: 995 DTETIFFENPEDPEDFSPFSPIDPPEGFIEPPSFDEGPFXXXXXXXXXXXXXYGSAYSGE 816
           D +T FF+N    E+F  + P  PPE +I PPSFDEGP              YG AYSG 
Sbjct: 64  DIDTSFFDNLNPEEEFV-YDPPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPAYSGV 122

Query: 815 SLLGSDVLEMNAKVKKSIGFG-KGKREKIKDGFDEXXXXXXXXXXXXXXXXQLHFRXXXX 639
           S+LG D+  M++KVKK+ G+G + K+EKIKDGFDE                QLHFR    
Sbjct: 123 SVLGKDIYVMDSKVKKTSGWGSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFRAVVI 182

Query: 638 XXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIISVPMTKYLTFPHRSDGKYGAASVMLR 459
                                VQKSA+NARRNII+VPMTKYLTFPHRS+G +GAA VMLR
Sbjct: 183 VGDKQGRVGVGVGKAKEVIVAVQKSALNARRNIITVPMTKYLTFPHRSEGDFGAAKVMLR 242

Query: 458 PAAPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVAEER 279
           PA+PGTGVIAGGAVRIVLEMAGVENALGKQL S NALNNARATVVAVQ+MRQFSEVA ER
Sbjct: 243 PASPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEVARER 302

Query: 278 GIPMEQLWK 252
           GIPME+LWK
Sbjct: 303 GIPMEELWK 311


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