BLASTX nr result
ID: Lithospermum22_contig00013428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00013428
(1175 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit... 115 3e-28
emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera] 115 3e-28
emb|CBI40154.3| unnamed protein product [Vitis vinifera] 115 3e-28
ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Gly... 115 3e-28
ref|XP_002303924.1| chromatin remodeling complex subunit [Populu... 114 7e-28
>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
Length = 1408
Score = 115 bits (288), Expect(2) = 3e-28
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = -3
Query: 276 CMKLELSSHQMEAVEWMLHRERDPATLPHPLYIELLTEDGFFFYVNTVSGNIITGKAPTI 97
CMKL+L HQ AVEWML RER+ LPHPL+I+ LTEDGF FY+NTV+G I+TG P I
Sbjct: 329 CMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLI 388
Query: 96 KDFRGGFFCDEPGL 55
+DFRGG FCDEPGL
Sbjct: 389 RDFRGGMFCDEPGL 402
Score = 37.4 bits (85), Expect(2) = 3e-28
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2
Query: 61 GIGKTITALSLILKTQGTLA 2
G+GKTITALSLILKTQGT A
Sbjct: 401 GLGKTITALSLILKTQGTWA 420
Score = 56.2 bits (134), Expect(2) = 3e-13
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Frame = -1
Query: 437 YCSCDWEARRSLL-NVEV-------DDIGVWDVCECHVVGCNQRCSVPNASKKKLFQLDE 282
+ SCDWE R S+L N E D+ +W++ +CHV+GC C+ + SKKKLF+L E
Sbjct: 200 HLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKKLFELHE 259
Query: 281 IF 276
IF
Sbjct: 260 IF 261
Score = 45.8 bits (107), Expect(2) = 3e-13
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2
Query: 577 MDIYVPLAVWTGGWQFPRCATTAAVLFRHL 488
+D+Y+P+ +W+G WQFPR A+TA LFRHL
Sbjct: 173 VDVYLPIELWSG-WQFPRSASTAGALFRHL 201
>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
Length = 1208
Score = 115 bits (288), Expect(2) = 3e-28
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = -3
Query: 276 CMKLELSSHQMEAVEWMLHRERDPATLPHPLYIELLTEDGFFFYVNTVSGNIITGKAPTI 97
CMKL+L HQ AVEWML RER+ LPHPL+I+ LTEDGF FY+NTV+G I+TG P I
Sbjct: 277 CMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLI 336
Query: 96 KDFRGGFFCDEPGL 55
+DFRGG FCDEPGL
Sbjct: 337 RDFRGGMFCDEPGL 350
Score = 37.4 bits (85), Expect(2) = 3e-28
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2
Query: 61 GIGKTITALSLILKTQGTLA 2
G+GKTITALSLILKTQGT A
Sbjct: 349 GLGKTITALSLILKTQGTWA 368
Score = 56.2 bits (134), Expect(2) = 3e-13
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Frame = -1
Query: 437 YCSCDWEARRSLL-NVEV-------DDIGVWDVCECHVVGCNQRCSVPNASKKKLFQLDE 282
+ SCDWE R S+L N E D+ +W++ +CHV+GC C+ + SKKKLF+L E
Sbjct: 148 HLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKKLFELHE 207
Query: 281 IF 276
IF
Sbjct: 208 IF 209
Score = 45.8 bits (107), Expect(2) = 3e-13
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2
Query: 577 MDIYVPLAVWTGGWQFPRCATTAAVLFRHL 488
+D+Y+P+ +W+G WQFPR A+TA LFRHL
Sbjct: 121 VDVYLPIELWSG-WQFPRSASTAGALFRHL 149
>emb|CBI40154.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 115 bits (288), Expect(2) = 3e-28
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = -3
Query: 276 CMKLELSSHQMEAVEWMLHRERDPATLPHPLYIELLTEDGFFFYVNTVSGNIITGKAPTI 97
CMKL+L HQ AVEWML RER+ LPHPL+I+ LTEDGF FY+NTV+G I+TG P I
Sbjct: 277 CMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLI 336
Query: 96 KDFRGGFFCDEPGL 55
+DFRGG FCDEPGL
Sbjct: 337 RDFRGGMFCDEPGL 350
Score = 37.4 bits (85), Expect(2) = 3e-28
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2
Query: 61 GIGKTITALSLILKTQGTLA 2
G+GKTITALSLILKTQGT A
Sbjct: 349 GLGKTITALSLILKTQGTWA 368
Score = 56.2 bits (134), Expect(2) = 3e-13
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Frame = -1
Query: 437 YCSCDWEARRSLL-NVEV-------DDIGVWDVCECHVVGCNQRCSVPNASKKKLFQLDE 282
+ SCDWE R S+L N E D+ +W++ +CHV+GC C+ + SKKKLF+L E
Sbjct: 148 HLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKKLFELHE 207
Query: 281 IF 276
IF
Sbjct: 208 IF 209
Score = 45.8 bits (107), Expect(2) = 3e-13
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2
Query: 577 MDIYVPLAVWTGGWQFPRCATTAAVLFRHL 488
+D+Y+P+ +W+G WQFPR A+TA LFRHL
Sbjct: 121 VDVYLPIELWSG-WQFPRSASTAGALFRHL 149
>ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Glycine max]
Length = 1329
Score = 115 bits (288), Expect(2) = 3e-28
Identities = 51/72 (70%), Positives = 60/72 (83%)
Frame = -3
Query: 270 KLELSSHQMEAVEWMLHRERDPATLPHPLYIELLTEDGFFFYVNTVSGNIITGKAPTIKD 91
KL L HQ AVEWMLHRER+ LPHPL++ L TEDGF F+VNTV+G+I+TG+APT+KD
Sbjct: 282 KLNLFPHQRTAVEWMLHRERNAELLPHPLFVALSTEDGFSFHVNTVTGDIVTGEAPTVKD 341
Query: 90 FRGGFFCDEPGL 55
FRGG FCDEPGL
Sbjct: 342 FRGGMFCDEPGL 353
Score = 37.0 bits (84), Expect(2) = 3e-28
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = -2
Query: 61 GIGKTITALSLILKTQGTLA 2
G+GKT+TALSLI+KT+GTLA
Sbjct: 352 GLGKTVTALSLIMKTRGTLA 371
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Frame = -1
Query: 437 YCSCDWEARRSLLNVEV-------DDIGVWDVCECHVVGCNQRCSVPNASKKKLFQLDEI 279
+ SCDW RRS+L+ + +W++ +CHV+GC V N+S+K LFQL EI
Sbjct: 152 HLSCDWNERRSMLSYPDYCRKTYGANESIWNLSDCHVLGCKLHSGVSNSSRKILFQLHEI 211
Query: 278 F 276
F
Sbjct: 212 F 212
Score = 43.1 bits (100), Expect(2) = 2e-11
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -2
Query: 616 ITCHGTCSEL*LAMDIYVPLAVWTGGWQFPRCATTAAVLFRHL 488
+ C + + +D+YVP+ VW+G WQFPR A +FRHL
Sbjct: 112 VVCVEALPRVVVLVDVYVPVQVWSG-WQFPRSGPVAGAVFRHL 153
>ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222841356|gb|EEE78903.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1333
Score = 114 bits (285), Expect(2) = 7e-28
Identities = 52/74 (70%), Positives = 58/74 (78%)
Frame = -3
Query: 276 CMKLELSSHQMEAVEWMLHRERDPATLPHPLYIELLTEDGFFFYVNTVSGNIITGKAPTI 97
CMKL+L HQ AVEWML RER+ LPHPLY L TEDGF F+V+TVSG IITG APT+
Sbjct: 315 CMKLKLFPHQQAAVEWMLQRERNAQVLPHPLYTNLSTEDGFTFHVSTVSGEIITGVAPTV 374
Query: 96 KDFRGGFFCDEPGL 55
+DF GG FCDEPGL
Sbjct: 375 RDFHGGMFCDEPGL 388
Score = 37.0 bits (84), Expect(2) = 7e-28
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 61 GIGKTITALSLILKTQGTLA 2
G+GKTITALSLILKT+GT+A
Sbjct: 387 GLGKTITALSLILKTRGTVA 406
Score = 63.2 bits (152), Expect(2) = 3e-13
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Frame = -1
Query: 437 YCSCDWEARRSLL--------NVEVDDIGVWDVCECHVVGCNQRCSVPNASKKKLFQLDE 282
+ SCDWE RRS+L N D +W++ CHV+GCN C VP++S KK F+L E
Sbjct: 186 HLSCDWEKRRSMLVDGGEYFKNALGDHRSIWNLSGCHVLGCNLHCDVPDSSSKKRFELHE 245
Query: 281 IF 276
IF
Sbjct: 246 IF 247
Score = 38.9 bits (89), Expect(2) = 3e-13
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 577 MDIYVPLAVWTGGWQFPRCATTAAVLFRHL 488
+D+Y+P++VW+GG QFP+ A LFRHL
Sbjct: 159 VDVYLPVSVWSGG-QFPKSGPIAGSLFRHL 187