BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013410
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
emb|CBI15095.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   141   5e-32
ref|XP_003601293.1| Pentatricopeptide repeat-containing protein,...   139   2e-31

>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/144 (55%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
 Frame = -2

Query: 409 PLLKPASIHHS--------APPLDATTIANLIVXXXXXXXXXXXLQSIKKWSPELVNAIF 254
           PLLKP S +++        +PP DAT I NL++            +   +W+P LV+ + 
Sbjct: 16  PLLKPISYNYNLTTTTSPPSPPQDAT-IVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVL 74

Query: 253 KRLWNHGPKALQFFHLLDLHPSYTHSSDSFDYAIDISARMRDYKTLWSLVARMRMRKLGP 74
           K LWNHGPKALQFF  LD HP+Y H S SFD+AIDI+ R+RDYKTLW+LV RMR R+LGP
Sbjct: 75  KLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGP 134

Query: 73  GPKTFAIITERFVCAGKSDRAVKV 2
            PKTFAIITER+V AGK DRA+K+
Sbjct: 135 NPKTFAIITERYVSAGKPDRAIKI 158


>emb|CBI15095.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/144 (55%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
 Frame = -2

Query: 409 PLLKPASIHHS--------APPLDATTIANLIVXXXXXXXXXXXLQSIKKWSPELVNAIF 254
           PLLKP S +++        +PP DAT I NL++            +   +W+P LV+ + 
Sbjct: 16  PLLKPISYNYNLTTTTSPPSPPQDAT-IVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVL 74

Query: 253 KRLWNHGPKALQFFHLLDLHPSYTHSSDSFDYAIDISARMRDYKTLWSLVARMRMRKLGP 74
           K LWNHGPKALQFF  LD HP+Y H S SFD+AIDI+ R+RDYKTLW+LV RMR R+LGP
Sbjct: 75  KLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGP 134

Query: 73  GPKTFAIITERFVCAGKSDRAVKV 2
            PKTFAIITER+V AGK DRA+K+
Sbjct: 135 NPKTFAIITERYVSAGKPDRAIKI 158


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/136 (55%), Positives = 92/136 (67%), Gaps = 4/136 (2%)
 Frame = -2

Query: 397 PASIHHSAPPLD----ATTIANLIVXXXXXXXXXXXLQSIKKWSPELVNAIFKRLWNHGP 230
           P  I  S   LD    AT IA L++                +++PELV+ + KRLW HGP
Sbjct: 34  PNFITQSTSALDTAAAATDIATLVLESDPKSLRGSLHGLQLQFTPELVDKVLKRLWFHGP 93

Query: 229 KALQFFHLLDLHPSYTHSSDSFDYAIDISARMRDYKTLWSLVARMRMRKLGPGPKTFAII 50
           KALQFF  L+ HPSY HS+ SFD+AIDI+ RMRDYKT+W+LVARMR R++GP  KTFAII
Sbjct: 94  KALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAII 153

Query: 49  TERFVCAGKSDRAVKV 2
            ERFV AGK DRA+KV
Sbjct: 154 AERFVAAGKPDRAIKV 169


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/132 (55%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
 Frame = -2

Query: 385 HHSAP---PLDATTIANLIVXXXXXXXXXXXLQSIK-KWSPELVNAIFKRLWNHGPKALQ 218
           HHS     P +ATT+A LI+           L S   +W+P+LVN I KRLWNHGPKAL 
Sbjct: 18  HHSTTTTSPPEATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALH 77

Query: 217 FFHLLDLHPSYTHSSDSFDYAIDISARMRDYKTLWSLVARMRMRKLGPGPKTFAIITERF 38
           FF +L  HPSY H + SFD+AIDI AR+RD++TLW LV+RMR  +LGP P+TFAII ER+
Sbjct: 78  FFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERY 137

Query: 37  VCAGKSDRAVKV 2
              GK  RAV V
Sbjct: 138 AAMGKPHRAVTV 149


>ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355490341|gb|AES71544.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 317

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/139 (48%), Positives = 89/139 (64%)
 Frame = -2

Query: 418 FLYPLLKPASIHHSAPPLDATTIANLIVXXXXXXXXXXXLQSIKKWSPELVNAIFKRLWN 239
           F  PL    ++  S PP    T+A L++                +W+P LV+ I KRLWN
Sbjct: 19  FRLPLATLTTVPESPPPPIDATVAKLVLESDPKTLSQTLSNPTFQWTPLLVDNILKRLWN 78

Query: 238 HGPKALQFFHLLDLHPSYTHSSDSFDYAIDISARMRDYKTLWSLVARMRMRKLGPGPKTF 59
           HGPKALQFF  LD HP+Y HS  SF++A+DI+AR+R+Y T W+L+ RMR  +LGP PKTF
Sbjct: 79  HGPKALQFFKHLDRHPTYIHSISSFEHAVDIAARLREYNTAWALMGRMRALRLGPTPKTF 138

Query: 58  AIITERFVCAGKSDRAVKV 2
           AI+ ER+   GK+ +AVKV
Sbjct: 139 AILAERYATGGKAHKAVKV 157