BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013408
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36187.3| unnamed protein product [Vitis vinifera]              177   2e-50
ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266...   177   4e-50
ref|XP_002887830.1| hypothetical protein ARALYDRAFT_895951 [Arab...   168   1e-47
gb|AAM08130.1|AF324348_1 putative DNA repair protein XRCC1 [Arab...   165   8e-47
ref|NP_001185449.1| DNA-repair protein XRCC1 [Arabidopsis thalia...   165   2e-46

>emb|CBI36187.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  177 bits (448), Expect(2) = 2e-50
 Identities = 92/158 (58%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
 Frame = +1

Query: 214 AKMNIGQGGKSGVKRNLPSWMSARGESSKT-GKGNPSYGGSSSRQGNSEEGDTRTDDEAI 390
           +K + G G    VKR+LPSWMS     SK  GK +   GG   R+   +    + +    
Sbjct: 4   SKSSRGDGANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNGGKS 63

Query: 391 NNKSELRAKSVAADFSNLMEGVVFVLSGFVNPERATLRSQALEMGAQYQQDWNSDCTLLV 570
           NN+      S + +FSNL+EGVVFVLSGFVNPER+TLRSQALEMGA+YQ DWNS+CTLLV
Sbjct: 64  NNRPGASNLSTS-NFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTLLV 122

Query: 571 CAFPNTPKYRQVASDGGTIVSKEWISECHEQKKLVEIE 684
           CAFPNTPK+RQV +D GTIVSKEW+SEC+ QKKL +IE
Sbjct: 123 CAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIE 160



 Score = 49.3 bits (116), Expect(2) = 2e-50
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
 Frame = +2

Query: 794 YMMHAGKPWKRQSDSRQAD-----KKPSASQKSVSQGVPAKC---------VEEHFSSSE 931
           Y+MHAGKPW+R +   QA        PS S+  V +G+ +K           ++ FS SE
Sbjct: 162 YLMHAGKPWRRSNVPHQAKNDEEASPPSNSKMQVERGLRSKLTASKSGSNPAKDLFSPSE 221

Query: 932 VKKWAADD 955
           VKKWA DD
Sbjct: 222 VKKWAIDD 229


>ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266851 [Vitis vinifera]
          Length = 389

 Score =  177 bits (448), Expect(2) = 4e-50
 Identities = 92/158 (58%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
 Frame = +1

Query: 214 AKMNIGQGGKSGVKRNLPSWMSARGESSKT-GKGNPSYGGSSSRQGNSEEGDTRTDDEAI 390
           +K + G G    VKR+LPSWMS     SK  GK +   GG   R+   +    + +    
Sbjct: 4   SKSSRGDGANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNGGKS 63

Query: 391 NNKSELRAKSVAADFSNLMEGVVFVLSGFVNPERATLRSQALEMGAQYQQDWNSDCTLLV 570
           NN+      S + +FSNL+EGVVFVLSGFVNPER+TLRSQALEMGA+YQ DWNS+CTLLV
Sbjct: 64  NNRPGASNLSTS-NFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTLLV 122

Query: 571 CAFPNTPKYRQVASDGGTIVSKEWISECHEQKKLVEIE 684
           CAFPNTPK+RQV +D GTIVSKEW+SEC+ QKKL +IE
Sbjct: 123 CAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIE 160



 Score = 48.5 bits (114), Expect(2) = 4e-50
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 16/70 (22%)
 Frame = +2

Query: 794 YMMHAGKPWKRQSDSRQAD-------KKPSASQKSVSQGVPAKC---------VEEHFSS 925
           Y+MHAGKPW+R +   QA          PS S+  V +G+ +K           ++ FS 
Sbjct: 162 YLMHAGKPWRRSNVPHQAKNVADEEASPPSNSKMQVERGLRSKLTASKSGSNPAKDLFSP 221

Query: 926 SEVKKWAADD 955
           SEVKKWA DD
Sbjct: 222 SEVKKWAIDD 231


>ref|XP_002887830.1| hypothetical protein ARALYDRAFT_895951 [Arabidopsis lyrata subsp.
           lyrata] gi|297333671|gb|EFH64089.1| hypothetical protein
           ARALYDRAFT_895951 [Arabidopsis lyrata subsp. lyrata]
          Length = 356

 Score =  168 bits (425), Expect(2) = 1e-47
 Identities = 89/145 (61%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
 Frame = +1

Query: 253 KRNLPSWMSARGESSKTGKGNPSYGGSSSRQGNSEEGDTRTDDEAINNKSE-LRAKSVAA 429
           KRNLPSWMS+R   +  GK       S  ++   EE ++R    A +NKSE     S   
Sbjct: 4   KRNLPSWMSSRDPQTSPGK-------SHCKKPKDEEHNSRN---APSNKSEHAEPSSSTT 53

Query: 430 DFSNLMEGVVFVLSGFVNPERATLRSQALEMGAQYQQDWNSDCTLLVCAFPNTPKYRQVA 609
           +FS LMEGVVFVLSG VNPER+TLRSQAL MGA YQ DWNSD TLL+CAFPNTPK+RQV 
Sbjct: 54  EFSKLMEGVVFVLSGLVNPERSTLRSQALTMGATYQPDWNSDSTLLICAFPNTPKFRQVE 113

Query: 610 SDGGTIVSKEWISECHEQKKLVEIE 684
           ++GGTIVSK+WI+EC+ QKKLV+IE
Sbjct: 114 TNGGTIVSKDWITECYTQKKLVDIE 138



 Score = 48.9 bits (115), Expect(2) = 1e-47
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 19/73 (26%)
 Frame = +2

Query: 794 YMMHAGKPWKR--------QSDSRQADKKP--SASQKSVSQGVPA---------KCVEEH 916
           Y+MHAGKPW++        Q +S    KKP     +K+ ++G P+           V+E 
Sbjct: 140 YLMHAGKPWRKSNVRQNAIQENSEHRSKKPEKQVEKKTETRGTPSTSSKNRSACNLVKEP 199

Query: 917 FSSSEVKKWAADD 955
           FS +EVKKWA DD
Sbjct: 200 FSVTEVKKWARDD 212


>gb|AAM08130.1|AF324348_1 putative DNA repair protein XRCC1 [Arabidopsis thaliana]
           gi|11181954|emb|CAC16136.1| putative DNA repair protein
           XRCC1 [Arabidopsis thaliana]
          Length = 353

 Score =  165 bits (418), Expect(2) = 8e-47
 Identities = 88/145 (60%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
 Frame = +1

Query: 253 KRNLPSWMSARGESSKTGKGNPSYGGSSSRQGNSEEGDTRTDDEAINNKSE-LRAKSVAA 429
           KRNLPSWMS+R       K   S+      +G +EE ++R    A +NKSE     S   
Sbjct: 4   KRNLPSWMSSRDPEITPSK---SHCKKPKDEGPTEEHNSRN---APSNKSEHAEPSSNTT 57

Query: 430 DFSNLMEGVVFVLSGFVNPERATLRSQALEMGAQYQQDWNSDCTLLVCAFPNTPKYRQVA 609
           +FS LMEGVVFVLSGFVNPER+TLRSQAL MGA YQ DWN+  TLL+CAFPNTPK+RQV 
Sbjct: 58  EFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVE 117

Query: 610 SDGGTIVSKEWISECHEQKKLVEIE 684
           ++GGTI+SKEWI+EC+ QKKLV+IE
Sbjct: 118 TNGGTIISKEWITECYAQKKLVDIE 142



 Score = 48.9 bits (115), Expect(2) = 8e-47
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 19/73 (26%)
 Frame = +2

Query: 794 YMMHAGKPWKRQSDSRQAD--------KKP--SASQKSVSQGVPA---------KCVEEH 916
           Y+MHAGKPW++ S  + A+        KKP     +K+ ++G P+           V+E 
Sbjct: 144 YLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVEKKTETRGTPSTSSKNRSACNLVKEP 203

Query: 917 FSSSEVKKWAADD 955
           FS +EVKKWA DD
Sbjct: 204 FSVTEVKKWARDD 216


>ref|NP_001185449.1| DNA-repair protein XRCC1 [Arabidopsis thaliana]
           gi|332198283|gb|AEE36404.1| DNA-repair protein XRCC1
           [Arabidopsis thaliana]
          Length = 341

 Score =  165 bits (418), Expect(2) = 2e-46
 Identities = 88/145 (60%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
 Frame = +1

Query: 253 KRNLPSWMSARGESSKTGKGNPSYGGSSSRQGNSEEGDTRTDDEAINNKSE-LRAKSVAA 429
           KRNLPSWMS+R       K   S+      +G +EE ++R    A +NKSE     S   
Sbjct: 4   KRNLPSWMSSRDPEITPSK---SHCKKPKDEGPTEEHNSRN---APSNKSEHAEPSSNTT 57

Query: 430 DFSNLMEGVVFVLSGFVNPERATLRSQALEMGAQYQQDWNSDCTLLVCAFPNTPKYRQVA 609
           +FS LMEGVVFVLSGFVNPER+TLRSQAL MGA YQ DWN+  TLL+CAFPNTPK+RQV 
Sbjct: 58  EFSKLMEGVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVE 117

Query: 610 SDGGTIVSKEWISECHEQKKLVEIE 684
           ++GGTI+SKEWI+EC+ QKKLV+IE
Sbjct: 118 TNGGTIISKEWITECYAQKKLVDIE 142



 Score = 47.4 bits (111), Expect(2) = 2e-46
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
 Frame = +2

Query: 794 YMMHAGKPWKRQSDSRQADKKPS-----ASQKSVSQGVPAKC--VEEHFSSSEVKKWAAD 952
           Y+MHAGKPW++ S  + A+++ S     AS + +     + C  V+E F  +EVKKWA D
Sbjct: 144 YLMHAGKPWRKSSSPQDANREKSFSYCTASLRCLVDSNRSACNLVKEPFFVTEVKKWARD 203

Query: 953 D 955
           D
Sbjct: 204 D 204