BLASTX nr result

ID: Lithospermum22_contig00013407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013407
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]              132   7e-29
ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...   132   9e-29
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                  130   3e-28
ref|XP_002888721.1| predicted protein [Arabidopsis lyrata subsp....   129   4e-28
ref|XP_002522475.1| conserved hypothetical protein [Ricinus comm...   127   2e-27

>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score =  132 bits (332), Expect = 7e-29
 Identities = 69/127 (54%), Positives = 85/127 (66%)
 Frame = +1

Query: 10  KTKMALNRKVGGAALGLRRCIHAIAQQPPLSNIMSPSTNSSPPIVLPEDDSTINDNNFGF 189
           +T +    K  G     RR IH  ++  PL +++   T +SP +VLPE     N+NN   
Sbjct: 5   ETMLRTAGKFAGVNPNPRRFIHITSRPAPLDSVVDRLTATSPSLVLPE-----NENNSNM 59

Query: 190 EFSDNLFIGGSLELMAVPKKKTSRHKRGIRNGPKFLKPAPVIIRCKVCGQVKLPHFFCCS 369
            F ++ F  GS+ELMAVPKKK S HKRGIRNGPK LKP PVIIRCK CG+VKLPHFFCCS
Sbjct: 60  -FPNSPFNWGSMELMAVPKKKVSPHKRGIRNGPKALKPVPVIIRCKACGRVKLPHFFCCS 118

Query: 370 GIKEDTG 390
           GIK++ G
Sbjct: 119 GIKQNPG 125


>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  132 bits (331), Expect = 9e-29
 Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
 Frame = +1

Query: 43  GAALGLRRCIHAIAQQPPLSNIMSPSTNSSPPIVLPE----DDSTINDNNFGFEFSDNLF 210
           G  LG+R+  H +A  PPL   +  S  +SP   LPE     D++ N ++FGF F    F
Sbjct: 17  GCRLGIRKWTHVVAMAPPLDGALESSI-ASPQFTLPEFDANQDTSNNSSDFGFTFPGFSF 75

Query: 211 IGGSLELMAVPKKKTSRHKRGIRNGPKFLKPAPVIIRCKVCGQVKLPHFFCCSGIKEDTG 390
            GGS+ELMAVPK+K + HKRGIRNGPK LKP PVIIRCK CGQVKLPHF+CCSG +   G
Sbjct: 76  -GGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQVKLPHFYCCSGDRGKNG 134


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score =  130 bits (327), Expect = 3e-28
 Identities = 66/120 (55%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
 Frame = +1

Query: 43  GAALGLRRCIHAIAQQPPLSNIMSPSTNSSPPIVLPE----DDSTINDNNFGFEFSDNLF 210
           G  LG+R+  H +A  PPL   +  S  ++P   LPE     D++ N ++FGF F    F
Sbjct: 17  GCRLGIRKWTHVVAMAPPLDGALESSI-AAPQFTLPEFDANQDTSKNSSDFGFTFPGFSF 75

Query: 211 IGGSLELMAVPKKKTSRHKRGIRNGPKFLKPAPVIIRCKVCGQVKLPHFFCCSGIKEDTG 390
            GGS+ELMAVPK+K + HKRGIRNGPK LKP PVIIRCK CGQVKLPHF+CCSG +   G
Sbjct: 76  -GGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCSGDRGKNG 134


>ref|XP_002888721.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334562|gb|EFH64980.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 141

 Score =  129 bits (325), Expect = 4e-28
 Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 5/112 (4%)
 Frame = +1

Query: 52  LGLRRCIHAIAQQPPLSNIMSPSTNSSPPIVLPE-----DDSTINDNNFGFEFSDNLFIG 216
           L  R   H     PPL+  +  ST +SPP+VLPE      DS+I+D NF F F  + F G
Sbjct: 19  LEFRSFNHVSTISPPLNGAIDLST-ASPPLVLPEFYQDLSDSSIDDKNFRFCFPISFF-G 76

Query: 217 GSLELMAVPKKKTSRHKRGIRNGPKFLKPAPVIIRCKVCGQVKLPHFFCCSG 372
           GS+ELMAVPKKK S+HKRGIRNGPK LKP PVIIRC+ CG+VKLPHF+CCSG
Sbjct: 77  GSMELMAVPKKKISKHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCCSG 128


>ref|XP_002522475.1| conserved hypothetical protein [Ricinus communis]
           gi|223538360|gb|EEF39967.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  127 bits (319), Expect = 2e-27
 Identities = 65/124 (52%), Positives = 81/124 (65%), Gaps = 6/124 (4%)
 Frame = +1

Query: 43  GAALGLRRCIHAIAQQPPLSNIMSPSTNSSPPIVLPE------DDSTINDNNFGFEFSDN 204
           G  LG  R  H  A  PPL   ++ +  + P +VLPE      + ++  DNN  F F  +
Sbjct: 16  GYTLGFLRWTHVAAMPPPLDGSINNAI-APPQMVLPEFNPNHDNSNSSYDNNLEFGFLPS 74

Query: 205 LFIGGSLELMAVPKKKTSRHKRGIRNGPKFLKPAPVIIRCKVCGQVKLPHFFCCSGIKED 384
              GGS++LMAVPKKK SRHKRGIRNGPK LKP PVIIRC+ CG+VKLPHF+CCSG + +
Sbjct: 75  FSFGGSMDLMAVPKKKVSRHKRGIRNGPKALKPTPVIIRCRSCGRVKLPHFYCCSGERGN 134

Query: 385 TGGQ 396
            G Q
Sbjct: 135 AGEQ 138


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