BLASTX nr result

ID: Lithospermum22_contig00013404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013404
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258...   177   1e-42
emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]   175   4e-42
ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251...   174   1e-41
emb|CBI25319.3| unnamed protein product [Vitis vinifera]              162   4e-38
ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing fac...   161   8e-38

>ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
          Length = 307

 Score =  177 bits (448), Expect = 1e-42
 Identities = 92/180 (51%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
 Frame = +1

Query: 10  GPGGVRQYEGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYKCGERGHIERNCQNSPQ 189
           G GG R+Y GRGPPPGSGRCFNCG+DGHWARDCKAGDWKNKCY+CGERGHIERNCQNSP+
Sbjct: 86  GSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPR 145

Query: 190 KTS-HGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVEQDRISRSPRHSY 366
           K S HG                                     +R +E+D+ S SPR+  
Sbjct: 146 KLSRHG--RSYSRSPVRSRHGRSRSRSYSPSRSYSRSRSPPKRDRSIERDKRSGSPRYR- 202

Query: 367 SPEPEKGSSPL-RTRKRSLTPDDYIPNESPASKRGARYERKEDEYSQSPQERSQSPLSPD 543
           SPEP++ S+P  + RKRS TP+D  P E  +      Y+R++ EYSQSP+E+S+SP+S +
Sbjct: 203 SPEPKRRSTPTSKPRKRSPTPEDSRPQERISPN---VYKREQPEYSQSPREKSRSPVSSE 259


>emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
          Length = 306

 Score =  175 bits (444), Expect = 4e-42
 Identities = 90/179 (50%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
 Frame = +1

Query: 10  GPGGVRQYEGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYKCGERGHIERNCQNSPQ 189
           G GG R+Y GRGPPPGSGRCFNCG+DGHWARDCKAGDWKNKCY+CGERGHIERNCQNSP+
Sbjct: 86  GSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPR 145

Query: 190 KTSHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVEQDRISRSPRHSYS 369
           K S                                       +R +E+D+ S SPR+  S
Sbjct: 146 KLS--DMDGVTHDLQLDLAMAGAGAEVIAQVAVTGSRSPPKRDRSIERDKRSGSPRYR-S 202

Query: 370 PEPEKGSSPL-RTRKRSLTPDDYIPNESPASKRGARYERKEDEYSQSPQERSQSPLSPD 543
           PEP++ S+P  + RKRS TP+D  P E  +      Y+R++ EYSQSP+E+S+SP+S +
Sbjct: 203 PEPKRRSTPTSKPRKRSPTPEDSRPQERISPN---VYKREQPEYSQSPREKSRSPVSSE 258


>ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
          Length = 304

 Score =  174 bits (441), Expect = 1e-41
 Identities = 90/179 (50%), Positives = 104/179 (58%), Gaps = 3/179 (1%)
 Frame = +1

Query: 4   PRGPGGVRQYEGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYKCGERGHIERNCQNS 183
           PRGPGG R+Y GRGPPPGSGRCFNCG+DGHWARDCKAGDWKNKCY+CGERGHIERNCQNS
Sbjct: 83  PRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNS 142

Query: 184 PQKTSHG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVEQ-DRISRSPR 357
           P+K   G                                      ER  E+ +R SRSP 
Sbjct: 143 PKKLKRGRSYSRSPSPRRGRSRSRSRSRSYSRSRSYSQPRSSPKRERSAERLERRSRSPH 202

Query: 358 HSYSPEPEKGS-SPLRTRKRSLTPDDYIPNESPASKRGARYERKEDEYSQSPQERSQSP 531
            S SP+  K S  P + RKRS TPD+  P E   S R  +      +YS SP+ +S+SP
Sbjct: 203 DSRSPKRRKASPPPSKGRKRSPTPDERSPKERSPSPRDRKQTTNGSDYSDSPRVKSRSP 261


>emb|CBI25319.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  162 bits (410), Expect = 4e-38
 Identities = 84/164 (51%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
 Frame = +1

Query: 4   PRGPGGVRQYEGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYKCGERGHIERNCQNS 183
           PRGPGG R+Y GRGPPPGSGRCFNCG+DGHWARDCKAGDWKNKCY+CGERGHIERNCQNS
Sbjct: 115 PRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNS 174

Query: 184 PQKTSHG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVEQ-DRISRSPR 357
           P+K   G                                      ER  E+ +R SRSP 
Sbjct: 175 PKKLKRGRSYSRSPSPRRGRSRSRSRSRSYSRSRSYSQPRSSPKRERSAERLERRSRSPH 234

Query: 358 HSYSPEPEKGS-SPLRTRKRSLTPDDYIPNESPASKRGARYERK 486
            S SP+  K S  P + RKRS TPD+  P E   S R  R  ++
Sbjct: 235 DSRSPKRRKASPPPSKGRKRSPTPDERSPKERSPSPRDQRQPKR 278


>ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
           1 [Cucumis sativus] gi|449451691|ref|XP_004143595.1|
           PREDICTED: serine/arginine-rich splicing factor
           RS2Z32-like isoform 2 [Cucumis sativus]
           gi|449507559|ref|XP_004163066.1| PREDICTED:
           serine/arginine-rich splicing factor RS2Z32-like isoform
           1 [Cucumis sativus] gi|449507562|ref|XP_004163067.1|
           PREDICTED: serine/arginine-rich splicing factor
           RS2Z32-like isoform 2 [Cucumis sativus]
          Length = 309

 Score =  161 bits (407), Expect = 8e-38
 Identities = 89/188 (47%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
 Frame = +1

Query: 1   VPRGPGGVRQYEGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYKCGERGHIERNCQN 180
           VPRGPGG R+Y GRGPP G+GRCFNCG+DGHWARDCKAGDWKNKCY+CGERGHIE+NCQN
Sbjct: 82  VPRGPGGSREYLGRGPP-GTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQN 140

Query: 181 SPQKTSHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVEQDRISRSPRH 360
           SP+K   G                                     ER    D+ SRSPR 
Sbjct: 141 SPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLER---SDKRSRSPRG 197

Query: 361 SYSPEPEKGSSPLRTRKRSLTPDDYIPNESP--ASKRGARYERKEDEYSQSPQERSQSPL 534
             SP+    S P +  KRS TPD+  P E    +   G R  R     S+SP+ RS+SP+
Sbjct: 198 RSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPM 257

Query: 535 --SPDGNG 552
               D NG
Sbjct: 258 DEGEDFNG 265


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