BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013356
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su...   344   2e-92
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]    343   4e-92
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar...   343   6e-92
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su...   341   2e-91
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype...   340   3e-91

>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Brachypodium distachyon]
          Length = 177

 Score =  344 bits (883), Expect = 2e-92
 Identities = 167/175 (95%), Positives = 172/175 (98%)
 Frame = +2

Query: 161 MFFHIILERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 340
           MFFHI+LERNMQLHPRHFG  LRDKLVAKLMKDVEGTCSGRHGFVVAITG+E +GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60

Query: 341 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 520
           +GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 521 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRIDATEIFCIGTIKDDFLGVISDPGA 685
           SGDVPNYTTSDGSVKIQKESEVRLKIIGTR+DATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175


>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  343 bits (880), Expect = 4e-92
 Identities = 166/175 (94%), Positives = 172/175 (98%)
 Frame = +2

Query: 158 KMFFHIILERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFVVAITGIESVGKGLI 337
           +MFFHI+LERNMQLHPRHFG  LRDKLVAKLMKDVEGTCSGRHGFVVAITG+E +GKGLI
Sbjct: 59  EMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLI 118

Query: 338 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 517
           R+GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF
Sbjct: 119 REGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 178

Query: 518 QSGDVPNYTTSDGSVKIQKESEVRLKIIGTRIDATEIFCIGTIKDDFLGVISDPG 682
           QSGDVPNYTTSDGSVKIQKESEVRLKIIGTR+DATEIFCIGTIKDDFLGVISDPG
Sbjct: 179 QSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 233


>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 177

 Score =  343 bits (879), Expect = 6e-92
 Identities = 166/174 (95%), Positives = 171/174 (98%)
 Frame = +2

Query: 161 MFFHIILERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 340
           MFFHI+LERNMQLHPRHFG  LRDKLVAKLMKDVEGTCSGRHGFVVAITG+E +GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60

Query: 341 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 520
           +GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 521 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRIDATEIFCIGTIKDDFLGVISDPG 682
           SGDVPNYTTSDGSVKIQKESEVRLKIIGTR+DATEIFCIGTIKDDFLGVISDPG
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174


>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449518487|ref|XP_004166273.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 176

 Score =  341 bits (874), Expect = 2e-91
 Identities = 164/175 (93%), Positives = 173/175 (98%)
 Frame = +2

Query: 161 MFFHIILERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 340
           MFFHI+LERNMQLHPRHFGR+LR+ LV+KLMKDVEGTCSGRHGFVVAITGIE++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60

Query: 341 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 520
           DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 521 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRIDATEIFCIGTIKDDFLGVISDPGA 685
           SGDVPNYTTSDGSVKIQK+SEVRLKIIGTR+DATEIFCIGTIKDDFLGVI+DP A
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSA 175


>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
           gi|242056199|ref|XP_002457245.1| hypothetical protein
           SORBIDRAFT_03g003990 [Sorghum bicolor]
           gi|242090461|ref|XP_002441063.1| hypothetical protein
           SORBIDRAFT_09g019690 [Sorghum bicolor]
           gi|194708012|gb|ACF88090.1| unknown [Zea mays]
           gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
           II 19 kDa polypeptide [Zea mays]
           gi|241929220|gb|EES02365.1| hypothetical protein
           SORBIDRAFT_03g003990 [Sorghum bicolor]
           gi|241946348|gb|EES19493.1| hypothetical protein
           SORBIDRAFT_09g019690 [Sorghum bicolor]
           gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
           II polypeptide [Zea mays]
          Length = 177

 Score =  340 bits (873), Expect = 3e-91
 Identities = 164/175 (93%), Positives = 172/175 (98%)
 Frame = +2

Query: 161 MFFHIILERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 340
           MFFHI+LERNMQLHPRHFG  LRDKLV+KL+KDVEGTCSGRHGFVVAITG+E +GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60

Query: 341 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 520
           +GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 521 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRIDATEIFCIGTIKDDFLGVISDPGA 685
           SGDVPNYTTSDGSVKIQKESEVRLKIIGTR+DATEIFCIGTIKDDFLGVISDPGA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGA 175